| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750522
Identifier: 82750522
GI number: 82750522
Start: 840934
End: 841128
Strand: Direct
Name: 82750522
Synonym: SAB0772
Alternate gene names: NA
Gene position: 840934-841128 (Clockwise)
Preceding gene: 82750521
Following gene: 82750524
Centisome position: 30.66
GC content: 29.23
Gene sequence:
>195_bases ATGGCAGACGAAAGTAAATTTGAACAAGCAAAAGGTAATGTTAAAGAAACAATAGGTAATGTTACTGATAATAAAAATTT AGAAAACGAAGGTAAAGAAGATAAAGCTTCTGGTAAAGCGAAAGAATTCGTTGAAAATGCAAAAGAAAAAGCAACTGATT TTATTGATAAAGTAAAAGGTAACAAAGGCGAGTAA
Upstream 100 bases:
>100_bases TCAAATCAATATCAAAAATTATTTAAGTAAAATGTTTAGATAATTTTTCAGTGGGTAAGTATTATATATAACATTTAATT ATTCCGAGGAGGCATTTATT
Downstream 100 bases:
>100_bases TTTTACTTTTTATTCCTAATACACTGCACATGCCACTTAGTCGGTATAACCATCGGCTAGGTGGTTTTTTGTATTAAAAA AGTGGATACCAAAATTTATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 64; Mature: 63
Protein sequence:
>64_residues MADESKFEQAKGNVKETIGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE
Sequences:
>Translated_64_residues MADESKFEQAKGNVKETIGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE >Mature_63_residues ADESKFEQAKGNVKETIGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKGNKGE
Specific function: Unknown
COG id: COG3237
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0337 (CsbD) family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y772_STAAB (Q2YWN8)
Other databases:
- EMBL: AJ938182 - RefSeq: YP_416263.1 - ProteinModelPortal: Q2YWN8 - SMR: Q2YWN8 - EnsemblBacteria: EBSTAT00000013585 - GeneID: 3793559 - GenomeReviews: AJ938182_GR - KEGG: sab:SAB0772 - NMPDR: fig|273036.3.peg.873 - eggNOG: COG3237 - GeneTree: EBGT00050000023817 - HOGENOM: HBG704474 - OMA: MADENKF - ProtClustDB: CLSK884942 - BioCyc: SAUR273036:SAB0772-MONOMER - InterPro: IPR008462 - Gene3D: G3DSA:1.10.1470.10
Pfam domain/function: PF05532 CsbD; SSF69047 CsbD
EC number: NA
Molecular weight: Translated: 7033; Mature: 6902
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADESKFEQAKGNVKETIGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKG CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NKGE CCCC >Mature Secondary Structure ADESKFEQAKGNVKETIGNVTDNKNLENEGKEDKASGKAKEFVENAKEKATDFIDKVKG CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC NKGE CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA