| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is yhbJ [C]
Identifier: 82750471
GI number: 82750471
Start: 790617
End: 791528
Strand: Direct
Name: yhbJ [C]
Synonym: SAB0719
Alternate gene names: 82750471
Gene position: 790617-791528 (Clockwise)
Preceding gene: 82750469
Following gene: 82750472
Centisome position: 28.83
GC content: 31.69
Gene sequence:
>912_bases ATGGATAATAATGAAAAAGAAAAAAGTAAAAGTGAACTATTAGTTGTCACAGGTTTATCTGGCGCAGGTAAATCTTTGGT TATTCAATGCTTAGAAGACATGGGATATTTTTGTGTAGATAATCTACCACCAGTGTTATTGCCTAAATTTGTAGAGTTGA TGGAACAAGGAAATCCATCCTTAAGAAAAGTGGCAATTGCAATTGATTTAAGAGGTAAGGAACTATTTAATTCATTAGTT GCAGTAGTGGATAAAGTCAAAAGTGAAATTGACGTCATCATTGATGTTATGTTTTTAGAAGCTAGTACTGAAAAATTAAT TTCAAGATATAAGGAAACGCGTCGTGCACATCCTTTGATGGAACAAGGTAAAAGATCGTTAATCAATGCAATTAATGATG AGCGAGAGCATTTGTCTCAAATTAGAAGTATAGCTAATTTTGTTATAGATACTACAAAGTTATCACCTAAAGAATTAAAA GAACGCATTCGTCGATACTATGAAGATGAAGAGTTTGAAACTTTTACAATTAATGTCACAAGTTTCGGTTTTAAACATGG GATTCAGATGGATGCAGATTTAGTATTTGATGTACGATTTTTACCAAATCCATATTATGTAGTAGATTTAAGACCTTTAA CAGGATTAGATAAAGACGTTTATAATTATGTTATGAAATGGAAAGAGACAGAGATTTTCTTTGAAAAATTAACTGATTTG TTAGATTTTATGATACCCGGGTATAAAAAAGAAGGGAAATCTCAATTAGTAATTGCCATCGGTTGTACGGGTGGACAACA TAGATCTGTAGCATTAGCAGAACGACTAGGTAATTATCTAAATGAAGTATTTGAATATAATGTTTATGTGCATCATAGGG ACGCACATATTGAAAGTGGCGAGAAAAAATGA
Upstream 100 bases:
>100_bases TCTAGACATAGTTAAAAATAAATATAAAACATCGTTGCTTAATTTTGTCATAGAACATTTAAATTAACATCATGAAATTC GTTTTGGCGGTGAAAAAATA
Downstream 100 bases:
>100_bases GACAAATAAAAGTTGTACTTATCGGTGGTGGCACTGGCTTATCAGTCATGGCTAGGGGATTAAGAGAATTCCCAATTGAT ATTACAGCGATTGTAACAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLV AVVDKVKSEIDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELK ERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
Sequences:
>Translated_303_residues MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLV AVVDKVKSEIDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELK ERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK >Mature_303_residues MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPSLRKVAIAIDLRGKELFNSLV AVVDKVKSEIDVIIDVMFLEASTEKLISRYKETRRAHPLMEQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELK ERIRRYYEDEEFETFTINVTSFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESGEKK
Specific function: Displays ATPase and GTPase activities
COG id: COG1660
COG function: function code R; Predicted P-loop-containing kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0042 family
Homologues:
Organism=Escherichia coli, GI1789598, Length=285, Percent_Identity=40.7017543859649, Blast_Score=207, Evalue=7e-55,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y719_STAAB (Q2YSG2)
Other databases:
- EMBL: AJ938182 - RefSeq: YP_416212.1 - ProteinModelPortal: Q2YSG2 - STRING: Q2YSG2 - EnsemblBacteria: EBSTAT00000013345 - GeneID: 3793921 - GenomeReviews: AJ938182_GR - KEGG: sab:SAB0719 - NMPDR: fig|273036.3.peg.798 - eggNOG: COG1660 - GeneTree: EBGT00050000025377 - HOGENOM: HBG289732 - OMA: GIGCTGG - PhylomeDB: Q2YSG2 - ProtClustDB: PRK05416 - BioCyc: SAUR273036:SAB0719-MONOMER - HAMAP: MF_00636 - InterPro: IPR005337 - PIRSF: PIRSF005052
Pfam domain/function: PF03668 ATP_bind_2
EC number: NA
Molecular weight: Translated: 34839; Mature: 34839
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCC LRKVAIAIDLRGKELFNSLVAVVDKVKSEIDVIIDVMFLEASTEKLISRYKETRRAHPLM CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEE SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL EECHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG HHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC EKK CCC >Mature Secondary Structure MDNNEKEKSKSELLVVTGLSGAGKSLVIQCLEDMGYFCVDNLPPVLLPKFVELMEQGNPS CCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCEECCCCCHHHHHHHHHHHHCCCCC LRKVAIAIDLRGKELFNSLVAVVDKVKSEIDVIIDVMFLEASTEKLISRYKETRRAHPLM CEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHH EQGKRSLINAINDEREHLSQIRSIANFVIDTTKLSPKELKERIRRYYEDEEFETFTINVT HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEE SFGFKHGIQMDADLVFDVRFLPNPYYVVDLRPLTGLDKDVYNYVMKWKETEIFFEKLTDL EECHHCCCCCCCCEEEEEEECCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH LDFMIPGYKKEGKSQLVIAIGCTGGQHRSVALAERLGNYLNEVFEYNVYVHHRDAHIESG HHHHCCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCC EKK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA