| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is 82750161
Identifier: 82750161
GI number: 82750161
Start: 439377
End: 442082
Strand: Direct
Name: 82750161
Synonym: SAB0403
Alternate gene names: NA
Gene position: 439377-442082 (Clockwise)
Preceding gene: 82750160
Following gene: 82750162
Centisome position: 16.02
GC content: 38.73
Gene sequence:
>2706_bases ATGACAACACAGTTAAATATCAATTTAGTCATTGAAAATGCGAAACGTGTTATTACACCATTATCACCGATTTCGATTTT TGCAGCACGAAATCCATGGGAAGGATTAGAAGCGGATACGTTTGAAGATGTCGCAAAATGGTTACGTGATGTTCGAGATG TGGATATTTTCCCAAATAAAGCATTAATAGAAAGTGCTGTGGCACGTGGTGAATTAGACGAAAGTGTCTTTAATCAACTT GTTACTGATATGTTACTTGAACATCACTACAATATCCCGCAACACTACATCAATCTTTATATTGATAACATTAAAACATT AAAAGACGTACCTGCATCATATATGAATCATTCAAATGTTGATGTTGTTGCTGATCTACTATTAGAAAAATCAAAACGTG ATATGGCTGAATCATATCATCACTATGATGTACGTCCGATGAGTGATGCAATAATAGATGAACAAGGTGAGCCACTTAGC GAACAAGTGAATCGTCAAATGATTAAATGGACGAAACTTTATATCGACCAATTTTTATCGAGTTGGACAATGCCGAAGCG TGAACAAAGTTTTTACCATGCATGGTTGCATTTAGCGCAACATGACCATAGTTTTACTAAAGCACAGCGCCAAGTGATTA AAGACTTACCCAATGATCCTAAAATGACGATAGAGTCAGTATTAAATCATTTTTCAATAGCGCAGGAAGACTACCAGGCT TATGTTGAAGGACATCTTTTGGCGTTACCGGGTTGGGCAGGTATGTTATACTACCGCTCACAACAGCATCACTTTGAACA ACATTTGTTAACGGATTATTTGGCCATTCGGTTAGTTGTCGAACAATTGCTAGTTGGTGATGAGTTTAAGTCAGTCACTA AAGATTGTGAAAGTAGATCGGAAAATTGGTTTAAGCAAACTGTTGCATCATGGTGTTACTACAGTGATATGCCTAGCGAT GTATTACTACAACATGACGTCAATGAAATTCAAACGTTTATTCATTTTGCAGCAACTATGAATAAAAATGTATTTAAAAA TTTATGGTTGATTGCCTGGGAAATGACATACGAATCTCAGGTAAAACAAAAAATTAAAGCAGGTCATGAAAGTTTGGCGG GCGCATTAGATGTAAACCAAGTAAATGTTACTGAAAATGACAACGCTAATCAGTCACATTCAGTATCGTTAAATGATACA CAAGCAGTTGATGAAAATAATAGCGAGCTAAATCAGGTGGACACATCAACGAAAGCGCAAATTGCATTTTGTATAGATGT TCGTTCAGAACCATTTCGTAGACATATCGAAGCAGCAGGTCCATTTGAAACGATTGGTATTGCAGGTTTCTTTGGATTAC CTATTCAAAAAGATGCCGTAGACGAACAATTCAAACATGATTCATTACCTGTCATGGTACCGCCGGCATATCGCATTAAA GAGTTTGCGGACCGTTACGATATGAATGTATATCGACAACAGCAACAGACAATGTCATCGATGTTTTACACATTTAAATT GATGAAAAATAATGTCATGCCTAGTCTGTTATTGCCTGAATTAAGTGGGCCATTTTTAAGCTTGAGTACCATTGTCAATA CGATTATGCCTAGAAAAAGTCGCGCGTCTTTACAGAAAATAAAACAAAAATGGTTGAAGAAGCCTGAAACAAAGTTAACG ATTGATCGTGAGTTTGACAGAACATCAGACTTACCTGTTGGATTTACTGAGCAAGAGCAAATTGATTTCGCGTTACAAGC GTTGAAATTGATGGATTTAACCGAAGCATTTGCGCCGTTCGTTGTGTTAGCAGGTCATGCTAGTCATTCTCACAATAATC CACATCATGCATCACTTGAATGTGGGGCTTGTGGTGGTGCATCAAGCGGTTTTAATGCTAAGTTATTAGCGATGATATGT AATCGTCCAAATGTCAGACAAGGATTAAAACAAGCAGGCGTGTATATTCCAGAGACAACTGTTTTTGCGGCAGCAGAACA TCATACGTCTACTGATACGTTGGCATGGGTATATGTGCCAGACACATTATCAGCTTTAGCTCTAGATGCATATGAATCAT TGAATGACGTCATGCCGATGATTTCTGAACACGCGAATCGCGAACGTTTGGACAAACTGCCAACGATTGGTCGTGTGAAT CATCCAGTGGAAGAAGCGCAGCGGTTTGCAAGTGATTGGAGTGAAGTACGTCCAGAATGGGGCTTGGCTAAAAATGCATC ATTTATAATTGGACGACGCCAATTAACAAAAGGCATTGATTTAGAAGGGCGGACATTTTTACACAATTATGATTGGCGTA AAGATAAAGATGGCACATTGTTAAATACCATCATTTCTGGTCCGGTACTTGTGGCACAATGGATTAATTTACAATATTAT GCGTCGACAGTTGCGCCGCATTTTTACGGAAGTGGGAATAAAGCGACACAAACCGTCACGTCAGGTGTTGGTGTCATGCA AGGTAATGCGAGTGATCTGATGTATGGCTTATCATGGCAATCTGTTATGGCTGCTGATCGAACGATGTATCATTCGCCTA TTCGTTTACTTGTCGTTATTCAGGCACCCGACTATGTTGTAGCTAGACTACTCGCGAATAATGAGCATTTCGCTAGGAAG GCGTCTAATCATTGGCTGCGTTTAATGAGCGTTAATGAGGAAGGGCGTTTTAAAAGTTGGATTTAA
Upstream 100 bases:
>100_bases GGTATTGTACGTGTGGTTAGTTAATCTAGGTGAAGCACGCTCGAAAGCGATAGAAAGTCATCCGAATTATTTGAAGAAGT ATTTATAGGAGGTGAAAGGT
Downstream 100 bases:
>100_bases CGATGAAATGTTGCGATGCTAAGTAACTAATATATCATCATATCTACAATGTTCTAGCTTCTTAAAATATACTAAAAATG ATAAACTTAATGTAATAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 901; Mature: 900
Protein sequence:
>901_residues MTTQLNINLVIENAKRVITPLSPISIFAARNPWEGLEADTFEDVAKWLRDVRDVDIFPNKALIESAVARGELDESVFNQL VTDMLLEHHYNIPQHYINLYIDNIKTLKDVPASYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLS EQVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKDLPNDPKMTIESVLNHFSIAQEDYQA YVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAIRLVVEQLLVGDEFKSVTKDCESRSENWFKQTVASWCYYSDMPSD VLLQHDVNEIQTFIHFAATMNKNVFKNLWLIAWEMTYESQVKQKIKAGHESLAGALDVNQVNVTENDNANQSHSVSLNDT QAVDENNSELNQVDTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGFFGLPIQKDAVDEQFKHDSLPVMVPPAYRIK EFADRYDMNVYRQQQQTMSSMFYTFKLMKNNVMPSLLLPELSGPFLSLSTIVNTIMPRKSRASLQKIKQKWLKKPETKLT IDREFDRTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGACGGASSGFNAKLLAMIC NRPNVRQGLKQAGVYIPETTVFAAAEHHTSTDTLAWVYVPDTLSALALDAYESLNDVMPMISEHANRERLDKLPTIGRVN HPVEEAQRFASDWSEVRPEWGLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPVLVAQWINLQYY ASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRLLVVIQAPDYVVARLLANNEHFARK ASNHWLRLMSVNEEGRFKSWI
Sequences:
>Translated_901_residues MTTQLNINLVIENAKRVITPLSPISIFAARNPWEGLEADTFEDVAKWLRDVRDVDIFPNKALIESAVARGELDESVFNQL VTDMLLEHHYNIPQHYINLYIDNIKTLKDVPASYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLS EQVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKDLPNDPKMTIESVLNHFSIAQEDYQA YVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAIRLVVEQLLVGDEFKSVTKDCESRSENWFKQTVASWCYYSDMPSD VLLQHDVNEIQTFIHFAATMNKNVFKNLWLIAWEMTYESQVKQKIKAGHESLAGALDVNQVNVTENDNANQSHSVSLNDT QAVDENNSELNQVDTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGFFGLPIQKDAVDEQFKHDSLPVMVPPAYRIK EFADRYDMNVYRQQQQTMSSMFYTFKLMKNNVMPSLLLPELSGPFLSLSTIVNTIMPRKSRASLQKIKQKWLKKPETKLT IDREFDRTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGACGGASSGFNAKLLAMIC NRPNVRQGLKQAGVYIPETTVFAAAEHHTSTDTLAWVYVPDTLSALALDAYESLNDVMPMISEHANRERLDKLPTIGRVN HPVEEAQRFASDWSEVRPEWGLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPVLVAQWINLQYY ASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRLLVVIQAPDYVVARLLANNEHFARK ASNHWLRLMSVNEEGRFKSWI >Mature_900_residues TTQLNINLVIENAKRVITPLSPISIFAARNPWEGLEADTFEDVAKWLRDVRDVDIFPNKALIESAVARGELDESVFNQLV TDMLLEHHYNIPQHYINLYIDNIKTLKDVPASYMNHSNVDVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLSE QVNRQMIKWTKLYIDQFLSSWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKDLPNDPKMTIESVLNHFSIAQEDYQAY VEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAIRLVVEQLLVGDEFKSVTKDCESRSENWFKQTVASWCYYSDMPSDV LLQHDVNEIQTFIHFAATMNKNVFKNLWLIAWEMTYESQVKQKIKAGHESLAGALDVNQVNVTENDNANQSHSVSLNDTQ AVDENNSELNQVDTSTKAQIAFCIDVRSEPFRRHIEAAGPFETIGIAGFFGLPIQKDAVDEQFKHDSLPVMVPPAYRIKE FADRYDMNVYRQQQQTMSSMFYTFKLMKNNVMPSLLLPELSGPFLSLSTIVNTIMPRKSRASLQKIKQKWLKKPETKLTI DREFDRTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPFVVLAGHASHSHNNPHHASLECGACGGASSGFNAKLLAMICN RPNVRQGLKQAGVYIPETTVFAAAEHHTSTDTLAWVYVPDTLSALALDAYESLNDVMPMISEHANRERLDKLPTIGRVNH PVEEAQRFASDWSEVRPEWGLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTLLNTIISGPVLVAQWINLQYYA STVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQSVMAADRTMYHSPIRLLVVIQAPDYVVARLLANNEHFARKA SNHWLRLMSVNEEGRFKSWI
Specific function: Unknown
COG id: COG3002
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0753 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y403_STAAB (Q2YVS1)
Other databases:
- EMBL: AJ938182 - RefSeq: YP_415902.1 - STRING: Q2YVS1 - EnsemblBacteria: EBSTAT00000013130 - GeneID: 3793165 - GenomeReviews: AJ938182_GR - KEGG: sab:SAB0403 - NMPDR: fig|273036.3.peg.52 - eggNOG: COG3002 - GeneTree: EBGT00050000023942 - HOGENOM: HBG520117 - OMA: FAEDWSE - ProtClustDB: CLSK884660 - BioCyc: SAUR273036:SAB0403-MONOMER - HAMAP: MF_01871 - InterPro: IPR018752
Pfam domain/function: PF10070 DUF2309
EC number: NA
Molecular weight: Translated: 102687; Mature: 102555
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTQLNINLVIENAKRVITPLSPISIFAARNPWEGLEADTFEDVAKWLRDVRDVDIFPNK CCCEEEEEEEEECCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH ALIESAVARGELDESVFNQLVTDMLLEHHYNIPQHYINLYIDNIKTLKDVPASYMNHSNV HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCH DVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLSEQVNRQMIKWTKLYIDQFLS HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKDLPNDPKMTIESVLNHFSIAQEDYQA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAIRLVVEQLLVGDEFKSVTKDCESRS HHCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ENWFKQTVASWCYYSDMPSDVLLQHDVNEIQTFIHFAATMNKNVFKNLWLIAWEMTYESQ HHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHEEEEEEHHHHHH VKQKIKAGHESLAGALDVNQVNVTENDNANQSHSVSLNDTQAVDENNSELNQVDTSTKAQ HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCE IAFCIDVRSEPFRRHIEAAGPFETIGIAGFFGLPIQKDAVDEQFKHDSLPVMVPPAYRIK EEEEEECCCCHHHHHHHCCCCHHHHCCCHHCCCCCCHHHHHHHHCCCCCCEEECCHHHHH EFADRYDMNVYRQQQQTMSSMFYTFKLMKNNVMPSLLLPELSGPFLSLSTIVNTIMPRKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEHHHHHHHHCCCHH RASLQKIKQKWLKKPETKLTIDREFDRTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPF HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VVLAGHASHSHNNPHHASLECGACGGASSGFNAKLLAMICNRPNVRQGLKQAGVYIPETT EEEECCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCHH VFAAAEHHTSTDTLAWVYVPDTLSALALDAYESLNDVMPMISEHANRERLDKLPTIGRVN EEEEHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC HPVEEAQRFASDWSEVRPEWGLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTL CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCCCCEEEECCCCCCCCCCHH LNTIISGPVLVAQWINLQYYASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQ HHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCEEECCHHHHEECCCHH SVMAADRTMYHSPIRLLVVIQAPDYVVARLLANNEHFARKASNHWLRLMSVNEEGRFKSW HHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCCCCC I C >Mature Secondary Structure TTQLNINLVIENAKRVITPLSPISIFAARNPWEGLEADTFEDVAKWLRDVRDVDIFPNK CCEEEEEEEEECCHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCH ALIESAVARGELDESVFNQLVTDMLLEHHYNIPQHYINLYIDNIKTLKDVPASYMNHSNV HHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCHHHHCCCCH DVVADLLLEKSKRDMAESYHHYDVRPMSDAIIDEQGEPLSEQVNRQMIKWTKLYIDQFLS HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHH SWTMPKREQSFYHAWLHLAQHDHSFTKAQRQVIKDLPNDPKMTIESVLNHFSIAQEDYQA HCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHH YVEGHLLALPGWAGMLYYRSQQHHFEQHLLTDYLAIRLVVEQLLVGDEFKSVTKDCESRS HHCCCEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH ENWFKQTVASWCYYSDMPSDVLLQHDVNEIQTFIHFAATMNKNVFKNLWLIAWEMTYESQ HHHHHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHEEEEEEHHHHHH VKQKIKAGHESLAGALDVNQVNVTENDNANQSHSVSLNDTQAVDENNSELNQVDTSTKAQ HHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCEEECCCCCCCCCCCCHHHHHCCCCCCE IAFCIDVRSEPFRRHIEAAGPFETIGIAGFFGLPIQKDAVDEQFKHDSLPVMVPPAYRIK EEEEEECCCCHHHHHHHCCCCHHHHCCCHHCCCCCCHHHHHHHHCCCCCCEEECCHHHHH EFADRYDMNVYRQQQQTMSSMFYTFKLMKNNVMPSLLLPELSGPFLSLSTIVNTIMPRKS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEEHHHHHHHHCCCHH RASLQKIKQKWLKKPETKLTIDREFDRTSDLPVGFTEQEQIDFALQALKLMDLTEAFAPF HHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC VVLAGHASHSHNNPHHASLECGACGGASSGFNAKLLAMICNRPNVRQGLKQAGVYIPETT EEEECCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCHH VFAAAEHHTSTDTLAWVYVPDTLSALALDAYESLNDVMPMISEHANRERLDKLPTIGRVN EEEEHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCC HPVEEAQRFASDWSEVRPEWGLAKNASFIIGRRQLTKGIDLEGRTFLHNYDWRKDKDGTL CCHHHHHHHHHHHHHHCCCCCCCCCCCEEEEHHHHHCCCCCCCCEEEECCCCCCCCCCHH LNTIISGPVLVAQWINLQYYASTVAPHFYGSGNKATQTVTSGVGVMQGNASDLMYGLSWQ HHHHHCCHHHHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHCCCCEEECCHHHHEECCCHH SVMAADRTMYHSPIRLLVVIQAPDYVVARLLANNEHFARKASNHWLRLMSVNEEGRFKSW HHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHCCHHHHHHHCCCEEEEEEECCCCCCCCC I C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA