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The map label for this gene is set11

Identifier: 82750136

GI number: 82750136

Start: 411724

End: 412404

Strand: Direct

Name: set11

Synonym: SAB0376

Alternate gene names: NA

Gene position: 411724-412404 (Clockwise)

Preceding gene: 82750132

Following gene: 82750137

Centisome position: 15.01

GC content: 31.42

Gene sequence:

>681_bases
ATGAAATTTAAAGCGATAGCAAAAGCAAGTTTAGCATTGGGAATGTTAGCAACAGGTGTAATTACATCGAATGTACAATC
AGTACAAGCGAAAACAGAAGTTAAACAACAAAGTGAATCAGAGTTGAAACACTATTATAATAAACCATTTTTCGAGCGTA
AAAATGTGACTGGATATAAATATACTGAAAATGGTAAAGATTATATGGAAGTCGCAACAGATCATCAGTATTATCAAATA
TCGTTACTAGGTCCGGATAAAGATAAATTTAAAGAAGGAAATAATCCAGGTCTAGATATATTTGTCGTTAGGGAAGGTGA
CAGTAGGCAAGCTGCGAATTACTCAATTGGTGGCGTAACAAAAACAAACAGTCAACCTTTTATTGACTATATACACACAC
CAATCCTTGAAATCAAGAAAGGTAAAGAAGAACCACAAAGTAGTCTATACCAAATTTATAAAGAAGACATATCACTAAAA
GAACTTGATTTTAAATTAAGAAAGCAATTAATTAGTCAAAGTGGCTTGTATTCAAATGGTCTTAAACAAGGTCAAATTAC
AATTACAATGAAAGATGGCAAATCACATACTATCGATTTAAGTCAAAAACTTGAAAAAGAACGTATGGGTGAGTCAATCG
ACGGCAGAGAAATACAAAAAATTCTAGTAGAAATTAAATAA

Upstream 100 bases:

>100_bases
GGTTTAATTTGAAAGGGAATAGTGCCTCAATATAATGTAGGTAGATTGTTCATATTACGTAATTGAAAAATCAAATTTAA
ATAGATTGGGGCTAAAAATT

Downstream 100 bases:

>100_bases
TACATTCTAACAGCAAAGCGCTATGTTGAATAGTGCTTGTTATGGAAACTATGGAAGTTAAGCGACGTACTGTTGCTTAG
CTTCTTTTTTTGAGGGTCAA

Product: superantigen-like protein

Products: NA

Alternate protein names: Exotoxin; Superantigen-Like; Exotoxin-Like Protein

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPFFERKNVTGYKYTENGKDYMEVATDHQYYQI
SLLGPDKDKFKEGNNPGLDIFVVREGDSRQAANYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
ELDFKLRKQLISQSGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGESIDGREIQKILVEIK

Sequences:

>Translated_226_residues
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPFFERKNVTGYKYTENGKDYMEVATDHQYYQI
SLLGPDKDKFKEGNNPGLDIFVVREGDSRQAANYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
ELDFKLRKQLISQSGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGESIDGREIQKILVEIK
>Mature_226_residues
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPFFERKNVTGYKYTENGKDYMEVATDHQYYQI
SLLGPDKDKFKEGNNPGLDIFVVREGDSRQAANYSIGGVTKTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLK
ELDFKLRKQLISQSGLYSNGLKQGQITITMKDGKSHTIDLSQKLEKERMGESIDGREIQKILVEIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25671; Mature: 25671

Theoretical pI: Translated: 9.41; Mature: 9.41

Prosite motif: PS00278 STAPH_STREP_TOXIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPFFERKNVTGYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
YTENGKDYMEVATDHQYYQISLLGPDKDKFKEGNNPGLDIFVVREGDSRQAANYSIGGVT
ECCCCHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCEE
KTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLKELDFKLRKQLISQSGLYSNG
ECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
LKQGQITITMKDGKSHTIDLSQKLEKERMGESIDGREIQKILVEIK
CCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKFKAIAKASLALGMLATGVITSNVQSVQAKTEVKQQSESELKHYYNKPFFERKNVTGYK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCE
YTENGKDYMEVATDHQYYQISLLGPDKDKFKEGNNPGLDIFVVREGDSRQAANYSIGGVT
ECCCCHHHHHHHCCCCEEEEEEECCCHHHHCCCCCCCEEEEEEECCCCCCCCCEECCCEE
KTNSQPFIDYIHTPILEIKKGKEEPQSSLYQIYKEDISLKELDFKLRKQLISQSGLYSNG
ECCCCCHHHHHHCCHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
LKQGQITITMKDGKSHTIDLSQKLEKERMGESIDGREIQKILVEIK
CCCCEEEEEEECCCCCEECHHHHHHHHHCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA