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The map label for this gene is ygzD [H]

Identifier: 82750060

GI number: 82750060

Start: 348866

End: 349069

Strand: Direct

Name: ygzD [H]

Synonym: SAB0299

Alternate gene names: 82750060

Gene position: 348866-349069 (Clockwise)

Preceding gene: 82750056

Following gene: 82750061

Centisome position: 12.72

GC content: 39.22

Gene sequence:

>204_bases
GTGCGTAATCGATTGAAAGAATTACGAGCACGAGATGGCTTAAACCAAACGCAGCTTGCTAAACAAGCGGGTGTTTCAAG
ACAAACCATTTCGCTAATTGAGCGAAACAACTTTATGCCATCGGTATTAACTGCAATAAAGATTGCTCGTATCTTCAATG
AAAAGGTGGAAACTATTTTTATTATTGAGGAGGATGAGGCATGA

Upstream 100 bases:

>100_bases
CATACATAGGTGGACATTTATATTTTTTGTGTAGTTTTGACAAATATAGTTGTCAAAAAGACGCATATAATTTACAGTGT
AATTAAGGAGTTGATGCGAT

Downstream 100 bases:

>100_bases
AAGTACTAAGATATATCGGATATCTTTTACTAGGTGGACTTGTAGGTGGTATCATAGGTGGAATTTTAGGTAACTTTGAT
GGATTGGGTATTGAGAATTT

Product: DNA-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLTAIKIARIFNEKVETIFIIEEDEA

Sequences:

>Translated_67_residues
MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLTAIKIARIFNEKVETIFIIEEDEA
>Mature_67_residues
MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLTAIKIARIFNEKVETIFIIEEDEA

Specific function: Unknown

COG id: COG1476

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 7730; Mature: 7730

Theoretical pI: Translated: 10.31; Mature: 10.31

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLTAIKIARIFNEKVETIF
CCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE
IIEEDEA
EEECCCC
>Mature Secondary Structure
MRNRLKELRARDGLNQTQLAKQAGVSRQTISLIERNNFMPSVLTAIKIARIFNEKVETIF
CCHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEE
IIEEDEA
EEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]