Definition Staphylococcus aureus RF122, complete genome.
Accession NC_007622
Length 2,742,531

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The map label for this gene is hel [H]

Identifier: 82750007

GI number: 82750007

Start: 294899

End: 295789

Strand: Direct

Name: hel [H]

Synonym: SAB0244

Alternate gene names: 82750007

Gene position: 294899-295789 (Clockwise)

Preceding gene: 82750004

Following gene: 82750008

Centisome position: 10.75

GC content: 32.66

Gene sequence:

>891_bases
ATGAATAAAATTTCAAAGTATATTGCAATAGCATCATTATCGGTAGCGGTTACAGTTTCTGCACCACAAACGACAAATTC
TACAGCGATTGCCAAAAGTTCTGCTGAAGTTCAACAAACGCAACAAGCTTCTATACCAGCATCACAAAAGGTGAATCTTG
GTAATCAAAATATTATGGCAGTGGCTTGGTATCAAAATTCAGCTGAAGCAAAAGCATTATATTTACAAGGTTATAACAGT
GCAAAGACTCAGTTAGATAAAGAGATTAAAAAGAATAAAGGTAAACATAAGTTAGCTATTGCTTTGGATTTAGATGAAAC
AGTTTTAGATAATTCTCCATATCAAGGCTATGCATCAATACATAATAAACCTTTCCCAGAAGGTTGGCATGAATGGGTAC
AAGCTGCTAAAGCTAAACCTGTCTATGGCGCAAAAGAATTCTTGAAATATGCTGACAAAAAAGGTGTCGATATCTACTAT
ATTTCTGATAGAGATAAAGAAAAAGATTTAAAGGCAACACAAAAGAACTTAAAACAACAAGGTATCCCTCAAGCTAAGAA
GAGTCATATTTTACTAAAAGGTAAAGATGATAAGAGTAAAGAATCACGCAGACAAATAGTTCAAAAGGATCATAAACTTG
TCATGCTATTTGGAGATAATTTATTAGACTTTACAGATCCAAAAGAAGCTACAGCTGAATCTCGTGAAGCATTAATTGAA
AAACATAAAGACGATTTCGGTAAGAAATATATCATTTTCCCTAATCCAATGTATGGTAGTTGGGAAGCTACAATTTACAA
CAATAACTATAAAGCAAGTGACAAAGCAAAAGATAAATTACGTAAAAATGCTATTAAGCAATTCGATCCTAAAACAGGCG
AAGTTAAATAA

Upstream 100 bases:

>100_bases
TTCAAGAAATAATATTAAATATCTTTTCATAGTATAGCAATATTAAATAAATGCATTTATAATTTTAACTGTTTTTAAAT
ATTAATCATGAGGTGATAAG

Downstream 100 bases:

>100_bases
TATGTGAATTGGACGTCTACATGTACTTAAAGGTATATGTAGGCGTTTTTAAATTGATCCTTAATTTTAAATGTACCGTA
CACAAATAATAGACAATTAA

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein P4; OMP P4 [H]

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MNKISKYIAIASLSVAVTVSAPQTTNSTAIAKSSAEVQQTQQASIPASQKVNLGNQNIMAVAWYQNSAEAKALYLQGYNS
AKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYY
ISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFGDNLLDFTDPKEATAESREALIE
KHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK

Sequences:

>Translated_296_residues
MNKISKYIAIASLSVAVTVSAPQTTNSTAIAKSSAEVQQTQQASIPASQKVNLGNQNIMAVAWYQNSAEAKALYLQGYNS
AKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYY
ISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFGDNLLDFTDPKEATAESREALIE
KHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK
>Mature_296_residues
MNKISKYIAIASLSVAVTVSAPQTTNSTAIAKSSAEVQQTQQASIPASQKVNLGNQNIMAVAWYQNSAEAKALYLQGYNS
AKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASIHNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYY
ISDRDKEKDLKATQKNLKQQGIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFGDNLLDFTDPKEATAESREALIE
KHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK

Specific function: Unknown

COG id: COG2503

COG function: function code R; Predicted secreted acid phosphatase

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005519
- InterPro:   IPR023214
- InterPro:   IPR006423 [H]

Pfam domain/function: PF03767 Acid_phosphat_B [H]

EC number: NA

Molecular weight: Translated: 33328; Mature: 33328

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKISKYIAIASLSVAVTVSAPQTTNSTAIAKSSAEVQQTQQASIPASQKVNLGNQNIMA
CCHHHHHHHEEEEEEEEEEECCCCCCCCEEECCHHHHHHHHHHCCCCCCEECCCCCCEEE
VAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASI
EEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCHHHH
HNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQ
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHC
GIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFGDNLLDFTDPKEATAESREALIE
CCCCHHHCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
KHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK
HHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNKISKYIAIASLSVAVTVSAPQTTNSTAIAKSSAEVQQTQQASIPASQKVNLGNQNIMA
CCHHHHHHHEEEEEEEEEEECCCCCCCCEEECCHHHHHHHHHHCCCCCCEECCCCCCEEE
VAWYQNSAEAKALYLQGYNSAKTQLDKEIKKNKGKHKLAIALDLDETVLDNSPYQGYASI
EEEECCCCCCEEEEEECCCHHHHHHHHHHHHCCCCEEEEEEEECCHHHHCCCCCCCHHHH
HNKPFPEGWHEWVQAAKAKPVYGAKEFLKYADKKGVDIYYISDRDKEKDLKATQKNLKQQ
CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHC
GIPQAKKSHILLKGKDDKSKESRRQIVQKDHKLVMLFGDNLLDFTDPKEATAESREALIE
CCCCHHHCEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHH
KHKDDFGKKYIIFPNPMYGSWEATIYNNNYKASDKAKDKLRKNAIKQFDPKTGEVK
HHHHHHCCEEEEECCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1715322; 7542800 [H]