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The map label for this gene is hsdR [H]

Identifier: 82749905

GI number: 82749905

Start: 167330

End: 170119

Strand: Direct

Name: hsdR [H]

Synonym: SAB0135

Alternate gene names: 82749905

Gene position: 167330-170119 (Clockwise)

Preceding gene: 82749903

Following gene: 82749907

Centisome position: 6.1

GC content: 33.01

Gene sequence:

>2790_bases
ATGGCATACCAAAGTGAATACGCATTAGAAAATGAAATGATGAATCAACTTGAACAATTGGGTTACGAAAGAATAACGAT
ACGTGATAATAAGCAATTGCTTGATAATTTTAGATCGATTTTAAATGAGCGTCATGCGGACAAATTAGAAGGCAATCCCT
TAACAGATAAAGAATTTCAACGTCTGTTAACGATGATTGATGGGAAAAGTATTTTCGAGAGTGTCCGTATTTTACGTGAT
AAATTACCACTTAGACGTGATGATGAGTCTGAGATTTATTTGTCGTTTTTAGATACGAAAAGTTGGTGTAAAAATAAGTT
TCAAGTGACGAATCAAGTATCTGTCGAGGATACATATAAAGCACGTTATGATGTAACGATATTAATCAATGGACTACCCC
TTGTCCAAGTTGAATTGAAACGTCGAGGCATTGATATTAATGAGGCGTTTAACCAAGTAAAACGTTACCGTAAACAAAAT
TACACAGGCTTATTCCGCTACATACAAATGTTTATCATTAGTAATGGTGTTGAAACGCGATACTTTTCTAATAATGATAG
CGAACTATTGAAGAGTCACATGTTTTATTGGAGTGATAAACAGAATAACCGAATCAATACATTGCAATCGTTTGCTGAGT
CATTTATGAGACCTTGTCAATTAGCTAAGATGATATCGCGCTATATGATTATTAATGAAACAGATAGAATACTGATGGCA
ATGCGTCCGTATCAAGTGTATGCGGTAGAATCACTTATTCAACAAGCGACTGAGACAGGGGATAATGGATATGTATGGCA
TACAACTGGAAGTGGTAAGACGTTGACTTCTTTTAAAGCGAGTCAGATTTTATCACAGCAAGATGACATTAAGAAAGTTA
TCTTTTTGGTTGACCGTAAAGACTTGGATAGTCAAACAGAAGAGGAATTTAATAAATTTGCTAAGGGTGCTGTAGACAAA
ACTTTTAATACCTCGCAACTGTTACGCCAACTAAATGATAAAAGTTTGCCACTTATTGTAACGACGATTCAAAAAATGGC
TAAAGCGATTCAAGGTAATGCCCATTTATTAGAACAGTATAAAACGAATAAAGTTGTATTTATTATTGATGAGTGTCATC
GCAGTCAATTTGGTGACATGCATCGTCTAGTTAAACAACATTTCAAAAATGCCCAATACTTTGGTTTCACTGGTACGCCA
CGTTTTCCAGAAAATAGTAGTCAAGATGGTAGAACAACTGCAGATATTTTCGGTAGATGCTTACATACGTATTTAATTAG
AGATGCCATTCATGATGGTAATGTATTCGGTTTCTCAGTTGACTATATTAATACTTTTAAAAATAAAGCTTTAAAAGCAG
AAGATAACAGCATGGTTGAAGCAATTGATACGGAAGAAGTCTGGTTAGCGGATAAACGTGTGGAATTAGTAACACGACAT
ATCATCAATAATCATGATAAATATACACGGAATCGTCAATATTCAAGTATATTTACAGTTCAAAGTATTCACGCGCTTAT
TAAATATTATGAGACATTTAAGCGACTTAACAAAAAGTTGGAACAACCATTAACGGTAGCTGGTATATTTACGTTTAAAC
CTAATGAAGATGATCGTGATGGTGAAGTGCCATATCATTCACGTGAAAAATTAGAGATAATGATTAGCGATTATAATAAA
AAGTTCGAGACGAATTTTTCAACAGACACAACTAATGAGTATTTTAATCATATTTCAAAAAATGTTAAAAAGGGCGTTAA
AGATAGTAAAATTGATATCTTAATCGTTGTTAATATGTTCTTAACTGGTTTTGATAGTAAAGTACTGAACACTTTATATG
TTGATAAGAATTTAATGTATCATGATTTAATTCAAGCGTATTCACGTACAAATAGGGTTGAAAAAGAATCAAAGCCATTT
GGTAAAATTGTAAACTATCGTGACTTGAAAAAAGAGACAGACGATGCACTGAGAGTATTCTCACAAACAAATGATACGGA
TACAATTTTAATGCGTAGTTATGAAGAGTATAAAAAAGAATTTATGGACGCTTATCGTGAGCTTAAAATGATTGTGCCGA
CACCACACATGGTTGATGACATTCAAGATGAAGAAGAGCTAAAGCGCTTTGTTGAAGCTTATCGTTTATTAGCTAAAATA
ATATTACGTTTAAAAGCATTTGACGAGTTTGAGTTTACAATTGATGAAATTGGAATGGATGAACAAGAGAATGAAGACTA
TAAAAGTAAATATTTAGCCGTGTACGATCAAGTAAAAAGAGCGACGGCTGAGAAAAATAAAGTATCCATTTTAAATGATA
TTGATTTCGAAATAGAAATGATGCGTAATGATACGATTAATGTGAATTATATTATGAATATATTGAGACAAATTGATCTT
GAAGACAAAGCGGAACAACGTCGTAACCAAGAACAAATTAGACGTATTTTAGATCATGCAGATGATCCGACATTGAGGTT
AAAACGAGATCTAATTAGAGAATTCATCGACAATGTTGTACCTTCTTTAAATAAGGATGATGATATCGATCAAGAATATG
TTAATTTCGAAAGTATTAAAAAAGAAGCGGAGTTCAAAGGATTTGCTGGAGAGAGATCTATCGATGAACAAGCCCTAAAA
ACAATTTCAAATGACTACCAGTATAGTGGTGTTGTAAACCCACATCACCTTAAAAAAATGATTGGTGATTTGCCATTGAA
AGAAAAACGTAAAGCAAGAAAAGCCATTGAATCTTTCGTGGCAGAAACAACTGAAAAATACGGTGTGTAA

Upstream 100 bases:

>100_bases
AAATTAGAATAAATTTACGTTTGAAGATAAAAAACAAACATTTTTCATTAAAGTTTATGATATATTTAGAGCAATAGAAA
GTGTACGGAAGGGGATATGA

Downstream 100 bases:

>100_bases
TGATTCAGCCCCCTCGCTAGATTAGTGTAGGGGGCATAATTATTTCATTAGAAAAGGCTCATTTGTTAAATTCATCTTAT
TAAGAATATAACGAATGTCC

Product: type I restriction enzyme restriction chain

Products: NA

Alternate protein names: Type I restriction enzyme R protein [H]

Number of amino acids: Translated: 929; Mature: 928

Protein sequence:

>929_residues
MAYQSEYALENEMMNQLEQLGYERITIRDNKQLLDNFRSILNERHADKLEGNPLTDKEFQRLLTMIDGKSIFESVRILRD
KLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQN
YTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA
MRPYQVYAVESLIQQATETGDNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDK
TFNTSQLLRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTP
RFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVFGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH
IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNK
KFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPF
GKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKI
ILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQIDL
EDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALK
TISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV

Sequences:

>Translated_929_residues
MAYQSEYALENEMMNQLEQLGYERITIRDNKQLLDNFRSILNERHADKLEGNPLTDKEFQRLLTMIDGKSIFESVRILRD
KLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQN
YTGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA
MRPYQVYAVESLIQQATETGDNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDK
TFNTSQLLRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTP
RFPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVFGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH
IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNK
KFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPF
GKIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKI
ILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQIDL
EDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALK
TISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV
>Mature_928_residues
AYQSEYALENEMMNQLEQLGYERITIRDNKQLLDNFRSILNERHADKLEGNPLTDKEFQRLLTMIDGKSIFESVRILRDK
LPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYKARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNY
TGLFRYIQMFIISNGVETRYFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMAM
RPYQVYAVESLIQQATETGDNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRKDLDSQTEEEFNKFAKGAVDKT
FNTSQLLRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQYKTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPR
FPENSSQDGRTTADIFGRCLHTYLIRDAIHDGNVFGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRHI
INNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRDGEVPYHSREKLEIMISDYNKK
FETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMFLTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFG
KIVNYRDLKKETDDALRVFSQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKII
LRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEMMRNDTINVNYIMNILRQIDLE
DKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVVPSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKT
ISNDYQYSGVVNPHHLKKMIGDLPLKEKRKARKAIESFVAETTEKYGV

Specific function: Subunit R is required for both nuclease and ATPase activities, but not for modification [H]

COG id: COG0610

COG function: function code V; Type I site-specific restriction-modification system, R (restriction) subunit and related helicases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR014021
- InterPro:   IPR004473
- InterPro:   IPR006935
- InterPro:   IPR007409
- InterPro:   IPR022625 [H]

Pfam domain/function: PF12008 EcoR124_C; PF04313 HSDR_N; PF04851 ResIII [H]

EC number: =3.1.21.3 [H]

Molecular weight: Translated: 109347; Mature: 109216

Theoretical pI: Translated: 6.49; Mature: 6.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYQSEYALENEMMNQLEQLGYERITIRDNKQLLDNFRSILNERHADKLEGNPLTDKEFQ
CCCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCHHCCCCCCCHHHHH
RLLTMIDGKSIFESVRILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHCCHHHCCCEECCCHHHC
ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR
CEEEEEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEE
YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA
EECCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
MRPYQVYAVESLIQQATETGDNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK
ECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCC
DLDSQTEEEFNKFAKGAVDKTFNTSQLLRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY
CCCCHHHHHHHHHHHCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC
CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHH
LHTYLIRDAIHDGNVFGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH
HHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHH
IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD
HHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
GEVPYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMF
CCCCCCCCCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHH
LTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVF
HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCHHHHCCHHHHHHHHHHHHHHH
SQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKI
HCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHH
ILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEM
HHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE
MRNDTINVNYIMNILRQIDLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVV
ECCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKM
CCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
IGDLPLKEKRKARKAIESFVAETTEKYGV
HCCCCCHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AYQSEYALENEMMNQLEQLGYERITIRDNKQLLDNFRSILNERHADKLEGNPLTDKEFQ
CCCHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHCCHHCCCCCCCHHHHH
RLLTMIDGKSIFESVRILRDKLPLRRDDESEIYLSFLDTKSWCKNKFQVTNQVSVEDTYK
HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCHHHHCCHHHCCCEECCCHHHC
ARYDVTILINGLPLVQVELKRRGIDINEAFNQVKRYRKQNYTGLFRYIQMFIISNGVETR
CEEEEEEEECCCCEEEEHHHHCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCEE
YFSNNDSELLKSHMFYWSDKQNNRINTLQSFAESFMRPCQLAKMISRYMIINETDRILMA
EECCCHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEE
MRPYQVYAVESLIQQATETGDNGYVWHTTGSGKTLTSFKASQILSQQDDIKKVIFLVDRK
ECCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCC
DLDSQTEEEFNKFAKGAVDKTFNTSQLLRQLNDKSLPLIVTTIQKMAKAIQGNAHLLEQY
CCCCHHHHHHHHHHHCHHCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHHHHHH
KTNKVVFIIDECHRSQFGDMHRLVKQHFKNAQYFGFTGTPRFPENSSQDGRTTADIFGRC
CCCCEEEEEEHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCHHHHHHHH
LHTYLIRDAIHDGNVFGFSVDYINTFKNKALKAEDNSMVEAIDTEEVWLADKRVELVTRH
HHHHHHHHHHCCCCEEEEEHHHHHHHHHCCCCCCCCCHHHHCCCCHHHHHHHHHHHHHHH
IINNHDKYTRNRQYSSIFTVQSIHALIKYYETFKRLNKKLEQPLTVAGIFTFKPNEDDRD
HHCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCC
GEVPYHSREKLEIMISDYNKKFETNFSTDTTNEYFNHISKNVKKGVKDSKIDILIVVNMF
CCCCCCCCCCEEEEEECCCCHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEHHHH
LTGFDSKVLNTLYVDKNLMYHDLIQAYSRTNRVEKESKPFGKIVNYRDLKKETDDALRVF
HHCCCHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHCCCHHHHCCHHHHHHHHHHHHHHH
SQTNDTDTILMRSYEEYKKEFMDAYRELKMIVPTPHMVDDIQDEEELKRFVEAYRLLAKI
HCCCCCHHHHHHHHHHHHHHHHHHHHHCEEECCCCHHHHCCCCHHHHHHHHHHHHHHHHH
ILRLKAFDEFEFTIDEIGMDEQENEDYKSKYLAVYDQVKRATAEKNKVSILNDIDFEIEM
HHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE
MRNDTINVNYIMNILRQIDLEDKAEQRRNQEQIRRILDHADDPTLRLKRDLIREFIDNVV
ECCCCCCHHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC
PSLNKDDDIDQEYVNFESIKKEAEFKGFAGERSIDEQALKTISNDYQYSGVVNPHHLKKM
CCCCCCCCCHHHHHCHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHH
IGDLPLKEKRKARKAIESFVAETTEKYGV
HCCCCCHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA