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The map label for this gene is ssuC [H]

Identifier: 82749885

GI number: 82749885

Start: 136422

End: 137183

Strand: Direct

Name: ssuC [H]

Synonym: SAB0114

Alternate gene names: 82749885

Gene position: 136422-137183 (Clockwise)

Preceding gene: 82749884

Following gene: 82749886

Centisome position: 4.97

GC content: 35.43

Gene sequence:

>762_bases
ATGACACGTCTCACAATTAATAAAATTATATTACCTATTATCACATTTATTATTTTCTTAGGCATTTGGGAAATGGTCAT
TATTATTGGGCATTACCAACCTGTATTGTTACCTGGTCCTGCTCTTGTAGGAAAAAGCATATGGACTTTCATTGTTACTG
GAGAAATTTTCCAACATTTAGCAATTAGTTTATGGAGATTTGTAGCGGGCTTTATTGTCGCATTGGTGGTTGCTATTCCA
TTGGGCTTTTTGCTCGGAAGGAATCGTTGGCTATACAACGCTATCGAACCGCTATTTCAATTGATTAGGCCGATATCTCC
AATAGCTTGGGCGCCATTTGTTGTTCTATGGTTTGGTATTGATAGTTTGCCAGCGATTGCGATTATTTTTATCGCTGCTT
TTTTCCCAATTGTGTTCAATACCATTAAAGGCGTTAGAGACATTGAACCGCAATATTTAAAAATAGCGGCAAATTTAAAT
TTAACTGGGTGGCCATTGTATCGCAATATATTATTTCCCGGGGCATTTAAACAAATCATGGCTGGGATACATATGGCGGT
AGGAACAAGTTGGATATTTTTAGTTTCTGGTGAAATGATTGGTGCACAATCGGGATTAGGTTTTTTAATCGTTGATGCAC
GAAATATGTTGAACTTAGAAGATGTTTTAGCAGCAATATTCTTTATCGGATTATTTGGTTTTATTATTGATCGATTCATT
AGTTATATTGAGCAGTTTATACTTAGAAGATTTGGTGAATAA

Upstream 100 bases:

>100_bases
ATCAAGAAATTACGACATTGGTAAAACAACATCATTTGTTTAATCCACCTGCATATGATGACTTTGTTGAATCGTCATTG
TATAAGGAGGCATCACGTTC

Downstream 100 bases:

>100_bases
GGAGAGATGATGATGACTTTAGAAACGCTTATCAAAGAACAATTAGATCCTCATTTAGTAGAAGTTGATGAAGGGACGTA
TTATCCGAGAACATTTATCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MTRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFIVALVVAIP
LGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIDSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLN
LTGWPLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
SYIEQFILRRFGE

Sequences:

>Translated_253_residues
MTRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFIVALVVAIP
LGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIDSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLN
LTGWPLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
SYIEQFILRRFGE
>Mature_252_residues
TRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHLAISLWRFVAGFIVALVVAIPL
GFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGIDSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNL
TGWPLYRNILFPGAFKQIMAGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFIS
YIEQFILRRFGE

Specific function: Part of a binding-protein-dependent transport system for aliphatic sulfonates. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0600

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI87081802, Length=230, Percent_Identity=34.3478260869565, Blast_Score=143, Evalue=1e-35,
Organism=Escherichia coli, GI1786564, Length=252, Percent_Identity=28.1746031746032, Blast_Score=117, Evalue=5e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 28496; Mature: 28365

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
AISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWPLYRNILFPGAFKQIM
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCHHHHHHHCCHHHHHHH
AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
HHHHHHHCCCEEEEEECCHHCCCCCCCEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHH
SYIEQFILRRFGE
HHHHHHHHHHHCC
>Mature Secondary Structure 
TRLTINKIILPIITFIIFLGIWEMVIIIGHYQPVLLPGPALVGKSIWTFIVTGEIFQHL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHH
AISLWRFVAGFIVALVVAIPLGFLLGRNRWLYNAIEPLFQLIRPISPIAWAPFVVLWFGI
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
DSLPAIAIIFIAAFFPIVFNTIKGVRDIEPQYLKIAANLNLTGWPLYRNILFPGAFKQIM
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCCCHHHHHHHCCHHHHHHH
AGIHMAVGTSWIFLVSGEMIGAQSGLGFLIVDARNMLNLEDVLAAIFFIGLFGFIIDRFI
HHHHHHHCCCEEEEEECCHHCCCCCCCEEEECCCHHCCHHHHHHHHHHHHHHHHHHHHHH
SYIEQFILRRFGE
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10506196; 8905232; 9278503 [H]