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The map label for this gene is 82749860

Identifier: 82749860

GI number: 82749860

Start: 107836

End: 109011

Strand: Direct

Name: 82749860

Synonym: SAB0088

Alternate gene names: NA

Gene position: 107836-109011 (Clockwise)

Preceding gene: 82749859

Following gene: 82749861

Centisome position: 3.93

GC content: 28.32

Gene sequence:

>1176_bases
ATGTTTATTGGCAAGAATTTAGAATACGTGAGAAAGCTTAATGCTCTAAGTAGAAAAGAATTATCAGAAAAAATAAATGT
AAGTGAACAAGCAATTTGGCAATATGAAACAAAAAATATGATGCCAGAAATTAATAAAATTTATGATATGACATCTATTT
TTAATGTTAAATCTAGCTACTTTATTAGCGAGCAGCCCGAAGAGCTCCTAATAAATTCTGTCGATAAACATAGTATAGCT
TTTAGAGCAAAAAATTATAAAGTATCTACGAAACTATTAAATAAGCAATATTATCAAGCAATGTATTTATCTAATTTAAC
TAACTACTTATTTTCTTTTGTAAAGATACCGGATAATATTATTTTATCTTTAATAAATAATTTAGATGACTTGTTGAATG
GCAATTTAGAATCACTAAATAAAAAAGAAAGCATAAAAGAAATTGCTAAAGTTGTGAGGGCTAAAATTCTTCAAGACGAA
AGCAATGAAGCACTATTATTTATGCTTGAAAAAGCGGGTATAGTTATATACGAAAAGCGAATTAATGATAGCATAGACGC
ATATAGTTTTTGGAGTAAAGATCAGACACCTTTTATTATACTGGGTACAAATAAGGGGGTAGCAGTTAGAAGGAATTTTG
ATCTTGCACATGAGCTGGGACATCTCGTTCTACATCGTCATATTCAATTCGACTTATTATCTCCTGAAGAATATAAGACA
ATTGAACATGAGGCAGATATTTTCGCCTCTGAATTTTTACTACCTGAAGAAGCGTTTAAAAAAGACTTTGATCAAATGAC
CAAAAAATCAAATCCTGACTATTTAGCTGTATTGAAAGAAAAATGGTATGTTTCTATACAAGCAATTGCAATGAGAGCCT
ATTATCTAGGTCTAATGTCTAGTACTCAGTACAGATATTTTTGGGCATCATTAAATAAAAAAGGCTATAAAAGTAAAGAG
CCTTTAGACGACGTGATTGAAATGTCACGTCCTGTCAAAATGAATAGTTTATTAAAGTTGTATTTTGATAGAAATATACT
GACACCACAAAAATTATTGAATTATTTAAAAGTTGATGAAACATTTTTGAATCATCTAGCAGGTATTAATTTAAAACTCT
TTAAAGATTATGTTAATGAAAATAGAGAATATAATATAACGAATCTATATAAATAA

Upstream 100 bases:

>100_bases
TTAAAAACGATGGAGAGTTAGAATTCATAGATGTGGAACATGCATTTGGTATCAGTATCGATGAAGATAACGATATGATT
GAAAGCGAAAGGTGAAGTTA

Downstream 100 bases:

>100_bases
GGCACCGATATTTAAACCTCGAGCTGAAAAGATTATCATTTCAGTTCGAGGGTTTTTATTTGTAACATCTGTTGATAGGT
ATCGACAAGGACCTTTGGAT

Product: transcriptional regulator

Products: NA

Alternate protein names: Helix-Turn-Helix Domain-Containing Protein; Zn Peptidase; Helix-Turn-Helix Domain Protein; Transcriptional Regulator HTH_3 Family; Conserved Domain Protein; Transcription Regulator; XRE Family Transcriptional Regulator; Phage-Like Protein; Regulatory Protein; DNA-Bining Transcriptional Regulator

Number of amino acids: Translated: 391; Mature: 391

Protein sequence:

>391_residues
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEINKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIA
FRAKNYKVSTKLLNKQYYQAMYLSNLTNYLFSFVKIPDNIILSLINNLDDLLNGNLESLNKKESIKEIAKVVRAKILQDE
SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNKGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKE
PLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK

Sequences:

>Translated_391_residues
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEINKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIA
FRAKNYKVSTKLLNKQYYQAMYLSNLTNYLFSFVKIPDNIILSLINNLDDLLNGNLESLNKKESIKEIAKVVRAKILQDE
SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNKGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKE
PLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK
>Mature_391_residues
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEINKIYDMTSIFNVKSSYFISEQPEELLINSVDKHSIA
FRAKNYKVSTKLLNKQYYQAMYLSNLTNYLFSFVKIPDNIILSLINNLDDLLNGNLESLNKKESIKEIAKVVRAKILQDE
SNEALLFMLEKAGIVIYEKRINDSIDAYSFWSKDQTPFIILGTNKGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMSSTQYRYFWASLNKKGYKSKE
PLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDETFLNHLAGINLKLFKDYVNENREYNITNLYK

Specific function: Unknown

COG id: COG2856

COG function: function code E; Predicted Zn peptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 45954; Mature: 45954

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEINKIYDMTSIFNVKSSY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
FISEQPEELLINSVDKHSIAFRAKNYKVSTKLLNKQYYQAMYLSNLTNYLFSFVKIPDNI
EECCCCHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ILSLINNLDDLLNGNLESLNKKESIKEIAKVVRAKILQDESNEALLFMLEKAGIVIYEKR
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECC
INDSIDAYSFWSKDQTPFIILGTNKGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
CCCCCCHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHEEEECCCHHHHH
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
STQYRYFWASLNKKGYKSKEPLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDE
CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
TFLNHLAGINLKLFKDYVNENREYNITNLYK
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure
MFIGKNLEYVRKLNALSRKELSEKINVSEQAIWQYETKNMMPEINKIYDMTSIFNVKSSY
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCC
FISEQPEELLINSVDKHSIAFRAKNYKVSTKLLNKQYYQAMYLSNLTNYLFSFVKIPDNI
EECCCCHHHHHHCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
ILSLINNLDDLLNGNLESLNKKESIKEIAKVVRAKILQDESNEALLFMLEKAGIVIYEKR
HHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECC
INDSIDAYSFWSKDQTPFIILGTNKGVAVRRNFDLAHELGHLVLHRHIQFDLLSPEEYKT
CCCCCCHHCCCCCCCCCEEEEECCCCEEEEECCHHHHHHHHHHHHHHHEEEECCCHHHHH
IEHEADIFASEFLLPEEAFKKDFDQMTKKSNPDYLAVLKEKWYVSIQAIAMRAYYLGLMS
HHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHC
STQYRYFWASLNKKGYKSKEPLDDVIEMSRPVKMNSLLKLYFDRNILTPQKLLNYLKVDE
CCCEEEEEEECCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHH
TFLNHLAGINLKLFKDYVNENREYNITNLYK
HHHHHHCCCCHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA