| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
Click here to switch to the map view.
The map label for this gene is rhbC [H]
Identifier: 82749834
GI number: 82749834
Start: 76768
End: 78504
Strand: Direct
Name: rhbC [H]
Synonym: SAB0059
Alternate gene names: 82749834
Gene position: 76768-78504 (Clockwise)
Preceding gene: 82749833
Following gene: 82749835
Centisome position: 2.8
GC content: 36.44
Gene sequence:
>1737_bases GTGCAAAATAAAGAATTAATACAACATGCAGCGTATGCGGCTATCGAACGCATTTTAAATGAATATTTTAGAAAAGAAAA TTTATATCAAGTACCACCTCAAAATCATCAATGGTCTATACAATTATCTGAGCTCGAAACGTTAACAGGTCAATTCGCTT ATTGGTCTGCGATGGGGCATCATATGTATCATTCAGAAGTATGGCTTATTGATGGTAAAAGTAAGAAATTAACAACATAT AAAGAAGCCATTGCGCGTATTTTGCAACATATGGCTCAAAGTGCAGATAATCAAACGGCAGTGCAACAACATATGGCGCA AATTATGTCTGACATCGATAATAGCATTCATCGCACGGCGCGTTATTTGCAAAGTAACACAATAGATTACGCAGAGGATC GCTATATCGTTTCAGAACAATCTTTATACTTAGGTCATCCATTTCATCCGACTCCTAAGAGTGCAAGTGGGTTTTCAGAA GCAGATTTAGAGAAATATGCACCCGAATGTCATACATCATTCCAATTGCATTATTTAGCTGTGCATCAAGATGTTCTGCT CACGCGCTATGTAGAAGGTAAAGAAGATCAGGTTGAGAAAGTGTTGTATCAATTAGCAGATATAGACATATCAGAGATAC CTAAAGATTTTATTTTATTACCAATACATCCTTATCAAATCAATGTGTTGCAACAGCATCCACAGTATTTGCAATATAGT GAACAAGGTTTAATAAAAGACCTTGGCGTTTCCGGTGATTCAGTTTACCCGACGTCTTCGGTTAGAACTGTATTTTCAAA AGCATTAAACATTTATTTAAAATTACCGATACACGTTAAAATTACTAATTTTATACGTACGAATGATCTTGAACAGATTG AACGGACAATCGATGCCGCACAAGTTATCGCATCAGTCAAAGATGAGGTTGAAACACCCCATTTTAAATTGATGTTTGAA GAAGGATATCGTGCATTGTTACCGAATCCATTAGGGCAAACAGTTGAACCTGAAATGGATTTATTAACAAATAGTGCCAT GATTGTTCGTGAAGGGATACCGAATTACCATGCTGATAAAGATATTCATGTATTGGCGTCATTATTTGAAACGATGCCTG ATTCACCGACCTCTAAGTTATCACAAGTGATTGAGCAAAGTGGTTTAGCGCCAGAAGCATGGCTTGAATGTTATTTGGAT CGTACATTATTGCCGATATTAAAGCTGTATAGTAACACAGGCATTAGTCTAGAAGCACATGTACAAAATTCATTAATTGA ATTAAAAGATGGCATACCCGACGTATGCTTTGTCAGAGATCTTGAAGGCATTTGTCTATCTAGAACGATTGCTACTGAAA AACAACTTGTGCCAAATGTTGTGGCAGCATCTAGCCCTGTTGTATATGCACATGATGAAGCGTGGCATCGTTTTAAATAT TACGTTGTAGTAAATCACTTAGGACATTTAGTATCAACTATTGGTAAAGCGACAAAGAATGAAGTTGTGTTATGGCAACT TGTAGCGCATCGTCTTATGACTTGGAAAAAAGAATACGCGAATAACGCAGTATTTGTTGACTGTGTAGAAGATTTATATC AAACGCCGACCATTGCGGCTAAAGCGAATTTGATGAGTAAATTGAATGATTGTGGTGCAAACCCTATTTATACACATATA CCAAATCCAATTTGTCATAACAAGGAGGTATCGTATTGTGAGTCAAACAATTCTTAA
Upstream 100 bases:
>100_bases ATAGTATTTGCTGTAAGTAGTTTATTTTTAATTTGTTCAACCATTACTAATCAAATCAACGATCACACATTAATGAAATT ATGGGAGTTGAAACAAAAAA
Downstream 100 bases:
>100_bases TCGTGTAAAGACTAGAGTGATGCACCAACTGGTATCATCACTTATTTATGAGAATATCGTTGTTTATAAGACGTCATATC AAGACGGTGTTGATCATTTT
Product: siderophore biosynthesis protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 578; Mature: 578
Protein sequence:
>578_residues MQNKELIQHAAYAAIERILNEYFRKENLYQVPPQNHQWSIQLSELETLTGQFAYWSAMGHHMYHSEVWLIDGKSKKLTTY KEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTARYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSE ADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPIHPYQINVLQQHPQYLQYS EQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFE EGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPTSKLSQVIEQSGLAPEAWLECYLD RTLLPILKLYSNTGISLEAHVQNSLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRFKY YVVVNHLGHLVSTIGKATKNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHI PNPICHNKEVSYCESNNS
Sequences:
>Translated_578_residues MQNKELIQHAAYAAIERILNEYFRKENLYQVPPQNHQWSIQLSELETLTGQFAYWSAMGHHMYHSEVWLIDGKSKKLTTY KEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTARYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSE ADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPIHPYQINVLQQHPQYLQYS EQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFE EGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPTSKLSQVIEQSGLAPEAWLECYLD RTLLPILKLYSNTGISLEAHVQNSLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRFKY YVVVNHLGHLVSTIGKATKNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHI PNPICHNKEVSYCESNNS >Mature_578_residues MQNKELIQHAAYAAIERILNEYFRKENLYQVPPQNHQWSIQLSELETLTGQFAYWSAMGHHMYHSEVWLIDGKSKKLTTY KEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTARYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSE ADLEKYAPECHTSFQLHYLAVHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPIHPYQINVLQQHPQYLQYS EQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAAQVIASVKDEVETPHFKLMFE EGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADKDIHVLASLFETMPDSPTSKLSQVIEQSGLAPEAWLECYLD RTLLPILKLYSNTGISLEAHVQNSLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRFKY YVVVNHLGHLVSTIGKATKNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAAKANLMSKLNDCGANPIYTHI PNPICHNKEVSYCESNNS
Specific function: Unknown
COG id: COG4264
COG function: function code Q; Siderophore synthetase component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iucA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007310 - InterPro: IPR022770 [H]
Pfam domain/function: PF06276 FhuF; PF04183 IucA_IucC [H]
EC number: NA
Molecular weight: Translated: 65820; Mature: 65820
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQNKELIQHAAYAAIERILNEYFRKENLYQVPPQNHQWSIQLSELETLTGQFAYWSAMGH CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH HMYHSEVWLIDGKSKKLTTYKEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTA HEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHYLA HHHHCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE VHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPIHPYQINVLQQHPQYLQYS HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCEEHHHHHCCHHHHHH EQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAA HCCHHHHCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEEECHHHCCCHHHHHHHHHHH QVIASVKDEVETPHFKLMFEEGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADK HHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHCCHHEEECCCCCCCCCC DIHVLASLFETMPDSPTSKLSQVIEQSGLAPEAWLECYLDRTLLPILKLYSNTGISLEAH HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH VQNSLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRFKY HHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHEEH YVVVNHLGHLVSTIGKATKNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCHHH KANLMSKLNDCGANPIYTHIPNPICHNKEVSYCESNNS HHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQNKELIQHAAYAAIERILNEYFRKENLYQVPPQNHQWSIQLSELETLTGQFAYWSAMGH CCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEEHHHHHHHHHHHHHHHHHHH HMYHSEVWLIDGKSKKLTTYKEAIARILQHMAQSADNQTAVQQHMAQIMSDIDNSIHRTA HEECCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH RYLQSNTIDYAEDRYIVSEQSLYLGHPFHPTPKSASGFSEADLEKYAPECHTSFQLHYLA HHHHCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEEE VHQDVLLTRYVEGKEDQVEKVLYQLADIDISEIPKDFILLPIHPYQINVLQQHPQYLQYS HHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHCCCCEEEEECCCCEEHHHHHCCHHHHHH EQGLIKDLGVSGDSVYPTSSVRTVFSKALNIYLKLPIHVKITNFIRTNDLEQIERTIDAA HCCHHHHCCCCCCCCCCCHHHHHHHHHHHEEEEEEEEEEEEECHHHCCCHHHHHHHHHHH QVIASVKDEVETPHFKLMFEEGYRALLPNPLGQTVEPEMDLLTNSAMIVREGIPNYHADK HHHHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCCHHHHHHCCHHEEECCCCCCCCCC DIHVLASLFETMPDSPTSKLSQVIEQSGLAPEAWLECYLDRTLLPILKLYSNTGISLEAH HHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEH VQNSLIELKDGIPDVCFVRDLEGICLSRTIATEKQLVPNVVAASSPVVYAHDEAWHRFKY HHHHHHHHHCCCCCEEHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHEEH YVVVNHLGHLVSTIGKATKNEVVLWQLVAHRLMTWKKEYANNAVFVDCVEDLYQTPTIAA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEHHHHHHHCCCCHHH KANLMSKLNDCGANPIYTHIPNPICHNKEVSYCESNNS HHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11274118; 11481432 [H]