| Definition | Staphylococcus aureus RF122, complete genome. |
|---|---|
| Accession | NC_007622 |
| Length | 2,742,531 |
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The map label for this gene is hutH
Identifier: 82749785
GI number: 82749785
Start: 10890
End: 12404
Strand: Direct
Name: hutH
Synonym: SAB0008
Alternate gene names: 82749785
Gene position: 10890-12404 (Clockwise)
Preceding gene: 82749783
Following gene: 82749786
Centisome position: 0.4
GC content: 37.1
Gene sequence:
>1515_bases ATGACTTTATATTTAGATGGTGAAACACTAACAATTGAGGATATTAAATCATTTTTACAACAACAATCAAAGGTTGAAAT TATTGATGATGCGTTAGAACGTGTCAAAAAAAGCAGAGCGGTAGTTGAACGTATTATTGAAAATGAGGAAACGGTTTACG GTATTACTACAGGTTTTGGATTATTTAGTGATGTACGTATAGACCCGACGCAATATAATGAATTACAAGTGAATCTGATA CGCTCACATGCCTGTGGACTAGGTGAGCCATTTTCAAAAGAAGTAGCATTAGTCATGATGATTTTACGATTGAATACATT ATTAAAAGGTCATTCAGGTGCCACTTTAGAATTAGTGAGACAATTACAATTTTTTATAAATGAACGTATTATACCGATAA TCCCACAGCAAGGCTCTCTCGGTGCATCAGGAGATTTAGCGCCATTATCACATTTAGCATTAGCATTAATTGGTGAAGGG AAAGTATTGCACAGAGGGGAAGAAAAGGATAGTGACGATGTATTAAGAGAATTAAATAGACAACCTTTGAACCTTCAGGC TAAAGAAGGTTTAGCATTGATTAATGGTACGCAAGCTATGACAGCTCAAGGTGTCATTAGTTATATAGAAGCAGAAGATT TAGGTTACCAATCTGAATGGATTGCTGCATTAACGCATCAGTCTCTTAATGGCATTATAGATGCATATCGACATGATGTG CACGCTGTTCGTAATTTTCAAGAACAGATTAATGTGGCAGCGCGTATGCGTGATTGGTTAGAAGGATCAACATTAACGAC GCGACAAGCAGAAATACGTGTACAAGATGCATATACGTTGCGTTGTATACCACAAATCCATGGCGCGAGTTTTCAAGTAT TCAATTATGTTAAACAGCAATTAGAATTTGAAATGAATGCGGCTAATGATAATCCACTTATATTTGAGGAAGTAAATGAA ACGTTTGTTATTTCAGGTGGTAACTTCCATGGACAACCTATTGCTTTTGCATTAGATCATCTTAAATTAGGTGTAAGTGA ATTAGCAAACGTATCGGAACGTCGTCTAGAGCGACTAGTAAATCCTCAATTAAATGGTGATTTACCAGCATTTCTTAGTC CAGAGCCAGGATTGCAAAGTGGCGCGATGATTATGCAATATGCTGCTGCAAGTCTCGTTTCTGAAAATAAAACTTTAGCG CATCCAGCGAGTGTTGATTCTATCACTTCATCTGCGAACCAAGAAGATCACGTATCTATGGGAACTACAGCTGCTAGACA TGGTTATCAAATTATTGAAAATACAAGACGTGTGTTGGCAATCGAATGTGTTATTGCATTACAAGCAACAGAGTTGAAAG GTGTCGAAGGATTATCACCAAAAACACGTCGCAAGTATGATGAGTTTCGAAGTATCGTGCCATCCATTACACATGACCGT CAATTTCATAGAGATATTGAAGCGGTTGCACAGTATTTAAAGCAATCAATTTATCAAACGACTGCATGTCACTAA
Upstream 100 bases:
>100_bases TAATAGGTTATAAATGTACGTAAAACCATTGTTTCAATAAAAATGAAAACGTATACTTCAAGAAGGATGGGTTACTTAAT ATAAACAAGGGGGTACATAT
Downstream 100 bases:
>100_bases ATCGACATGAGTGATGTTTGAAATCGTTACTTGAAAAAGCAAATATAGTTTGCTATATTAAAAATAACTTAATAAGACAT TGTTCGTAGGACAAGTAATA
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MTLYLDGETLTIEDIKSFLQQQSKVEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLI RSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEG KVLHRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV HAVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEVNE TFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLA HPASVDSITSSANQEDHVSMGTTAARHGYQIIENTRRVLAIECVIALQATELKGVEGLSPKTRRKYDEFRSIVPSITHDR QFHRDIEAVAQYLKQSIYQTTACH
Sequences:
>Translated_504_residues MTLYLDGETLTIEDIKSFLQQQSKVEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLI RSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEG KVLHRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV HAVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEVNE TFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLA HPASVDSITSSANQEDHVSMGTTAARHGYQIIENTRRVLAIECVIALQATELKGVEGLSPKTRRKYDEFRSIVPSITHDR QFHRDIEAVAQYLKQSIYQTTACH >Mature_503_residues TLYLDGETLTIEDIKSFLQQQSKVEIIDDALERVKKSRAVVERIIENEETVYGITTGFGLFSDVRIDPTQYNELQVNLIR SHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVRQLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGK VLHRGEEKDSDDVLRELNRQPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDVH AVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQLEFEMNAANDNPLIFEEVNET FVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLVNPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAH PASVDSITSSANQEDHVSMGTTAARHGYQIIENTRRVLAIECVIALQATELKGVEGLSPKTRRKYDEFRSIVPSITHDRQ FHRDIEAVAQYLKQSIYQTTACH
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=506, Percent_Identity=45.8498023715415, Blast_Score=418, Evalue=1e-117, Organism=Caenorhabditis elegans, GI17567831, Length=510, Percent_Identity=44.5098039215686, Blast_Score=389, Evalue=1e-108,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 56136; Mature: 56005
Theoretical pI: Translated: 5.24; Mature: 5.24
Prosite motif: PS00488 PAL_HISTIDASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLYLDGETLTIEDIKSFLQQQSKVEIIDDALERVKKSRAVVERIIENEETVYGITTGFG CEEEECCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR CCCCCEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLHRGEEKDSDDVLRELNR HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCC QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV CCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH HAVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEHHHCCCHHHHHHHHHHH LEFEMNAANDNPLIFEEVNETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV HHEEECCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC GTTAARHGYQIIENTRRVLAIECVIALQATELKGVEGLSPKTRRKYDEFRSIVPSITHDR CCHHHHHHHHHHHCCHHEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCHH QFHRDIEAVAQYLKQSIYQTTACH HHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TLYLDGETLTIEDIKSFLQQQSKVEIIDDALERVKKSRAVVERIIENEETVYGITTGFG EEEECCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCC LFSDVRIDPTQYNELQVNLIRSHACGLGEPFSKEVALVMMILRLNTLLKGHSGATLELVR CCCCCEECCCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHH QLQFFINERIIPIIPQQGSLGASGDLAPLSHLALALIGEGKVLHRGEEKDSDDVLRELNR HHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHCC QPLNLQAKEGLALINGTQAMTAQGVISYIEAEDLGYQSEWIAALTHQSLNGIIDAYRHDV CCCCEECCCCEEEEECCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH HAVRNFQEQINVAARMRDWLEGSTLTTRQAEIRVQDAYTLRCIPQIHGASFQVFNYVKQQ HHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEEECCEEEEEEHHHCCCHHHHHHHHHHH LEFEMNAANDNPLIFEEVNETFVISGGNFHGQPIAFALDHLKLGVSELANVSERRLERLV HHEEECCCCCCCEEEEECCCEEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHC NPQLNGDLPAFLSPEPGLQSGAMIMQYAAASLVSENKTLAHPASVDSITSSANQEDHVSM CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCCC GTTAARHGYQIIENTRRVLAIECVIALQATELKGVEGLSPKTRRKYDEFRSIVPSITHDR CCHHHHHHHHHHHCCHHEEEEHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCHHCHH QFHRDIEAVAQYLKQSIYQTTACH HHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA