Click here to switch to the map view.

The map label for this gene is yrbA [C]

Identifier: 82703855

GI number: 82703855

Start: 3147187

End: 3147438

Strand: Reverse

Name: yrbA [C]

Synonym: Nmul_A2742

Alternate gene names: 82703855

Gene position: 3147438-3147187 (Counterclockwise)

Preceding gene: 82703856

Following gene: 82703850

Centisome position: 98.84

GC content: 52.78

Gene sequence:

>252_bases
ATGGTTACAGCGGACAGCATAAAAACACATATCGAGACATCCATGTCTTGTGAACTGGTGCATGTGGAAGGGGATGACGG
CTACCATTTCAGTGCCCTCATCGTCAGCCCGGAATTCCGGGGGAAAAATATGGTGCAGCAGCACCAGCTGGTTTACCGGG
CACTCGGCGACAGGATGAAACAGGAGATTCACGCACTGTCCATGAAAACCATGACGCCGGAGCAGTGGGCGGAAAGCAAC
AACCAGAACTGA

Upstream 100 bases:

>100_bases
TATGGTTTTTAGGGGTGGAACGGGATACATTCATGCCCATTCTCGTTTTTTATGGCAAGTGCCAGCAAGGGAAACTACAG
GAAAGTAAGGGAAACTATAG

Downstream 100 bases:

>100_bases
GCTCCCCTTGGGGACTAGGGCTGCGCAATCTGGATTCGAGAACAGAGACTCCGCCGGGGTATCAGGCGGCAGGCGCCATG
ACCGCACGCAGCTTCTGCAT

Product: BolA-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 83; Mature: 83

Protein sequence:

>83_residues
MVTADSIKTHIETSMSCELVHVEGDDGYHFSALIVSPEFRGKNMVQQHQLVYRALGDRMKQEIHALSMKTMTPEQWAESN
NQN

Sequences:

>Translated_83_residues
MVTADSIKTHIETSMSCELVHVEGDDGYHFSALIVSPEFRGKNMVQQHQLVYRALGDRMKQEIHALSMKTMTPEQWAESN
NQN
>Mature_83_residues
MVTADSIKTHIETSMSCELVHVEGDDGYHFSALIVSPEFRGKNMVQQHQLVYRALGDRMKQEIHALSMKTMTPEQWAESN
NQN

Specific function: Unknown

COG id: COG5007

COG function: function code K; Predicted transcriptional regulator, BolA superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bolA/yrbA family [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002634 [H]

Pfam domain/function: PF01722 BolA [H]

EC number: NA

Molecular weight: Translated: 9478; Mature: 9478

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
7.2 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
7.2 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVTADSIKTHIETSMSCELVHVEGDDGYHFSALIVSPEFRGKNMVQQHQLVYRALGDRMK
CCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
QEIHALSMKTMTPEQWAESNNQN
HHHHHHHHCCCCHHHHHCCCCCC
>Mature Secondary Structure
MVTADSIKTHIETSMSCELVHVEGDDGYHFSALIVSPEFRGKNMVQQHQLVYRALGDRMK
CCCCHHHHHHHCCCCCEEEEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
QEIHALSMKTMTPEQWAESNNQN
HHHHHHHHCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]