Click here to switch to the map view.

The map label for this gene is ybgC [C]

Identifier: 82703831

GI number: 82703831

Start: 3118906

End: 3119334

Strand: Reverse

Name: ybgC [C]

Synonym: Nmul_A2718

Alternate gene names: 82703831

Gene position: 3119334-3118906 (Counterclockwise)

Preceding gene: 82703832

Following gene: 82703830

Centisome position: 97.96

GC content: 51.98

Gene sequence:

>429_bases
ATGAAGATGTCTTACTCAAGTCCCGAGATTCCCTTTTCTTTGCCCGTCCGTGTCTATTATCAGGATACCGATGCAGGCGG
CGTGGTTTATCATTCAACTTATCTCGATTTCATGGAGCGTGCCCGCTACGAGTGGTTACGCGAATTGGGATTTCATATTC
ATTCATTAAGTCAGATTCATAAGGTGATTTTCATGGTACGTTCGCTTGGCATTGAATACTTTAAGCCGGCTCTGCTGGAT
GACCTGCTGCACATTACGGCGCAGGCAGCGGAATTGGGCAGAAGCCGCATCACGATCGCGCAACGGGTCTTGCGGGGCGA
TGTTACGCTCGCTGCCGCTACCGTGCAGGCGGTGTGCGTGGGAGTGGATAGTCTGAAACCGGTGAGCGTCCCTGCTGCCC
TGCGCCTCAAGCTTGGAAAATTATCATGA

Upstream 100 bases:

>100_bases
GCGGATTTGTGGGATGAGAAGCAGTAGTAAATTTTCCGTGATGCAATCGTAGTAGCCGGCAGCTGGTCGCGATGTCGGCA
TCGATTTCTCAATTGATCAG

Downstream 100 bases:

>100_bases
GTCCGACTGTTAGCCAGGATATGTCCCTTTTTCAGCTCGTCGGCAGCGCGAGCTTGCCGGTGCAGCTGGTGATGCTGTTG
CTGGTGATCGCTTCACTCAT

Product: 4-hydroxybenzoyl-CoA thioesterase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MKMSYSSPEIPFSLPVRVYYQDTDAGGVVYHSTYLDFMERARYEWLRELGFHIHSLSQIHKVIFMVRSLGIEYFKPALLD
DLLHITAQAAELGRSRITIAQRVLRGDVTLAAATVQAVCVGVDSLKPVSVPAALRLKLGKLS

Sequences:

>Translated_142_residues
MKMSYSSPEIPFSLPVRVYYQDTDAGGVVYHSTYLDFMERARYEWLRELGFHIHSLSQIHKVIFMVRSLGIEYFKPALLD
DLLHITAQAAELGRSRITIAQRVLRGDVTLAAATVQAVCVGVDSLKPVSVPAALRLKLGKLS
>Mature_142_residues
MKMSYSSPEIPFSLPVRVYYQDTDAGGVVYHSTYLDFMERARYEWLRELGFHIHSLSQIHKVIFMVRSLGIEYFKPALLD
DLLHITAQAAELGRSRITIAQRVLRGDVTLAAATVQAVCVGVDSLKPVSVPAALRLKLGKLS

Specific function: Unknown

COG id: COG0824

COG function: function code R; Predicted thioesterase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 4-hydroxybenzoyl-CoA thioesterase family [H]

Homologues:

Organism=Escherichia coli, GI1786957, Length=124, Percent_Identity=42.741935483871, Blast_Score=102, Evalue=7e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006684
- InterPro:   IPR008272
- InterPro:   IPR006683
- InterPro:   IPR014166 [H]

Pfam domain/function: PF03061 4HBT [H]

EC number: NA

Molecular weight: Translated: 15893; Mature: 15893

Theoretical pI: Translated: 9.35; Mature: 9.35

Prosite motif: PS01328 4HBCOA_THIOESTERASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMSYSSPEIPFSLPVRVYYQDTDAGGVVYHSTYLDFMERARYEWLRELGFHIHSLSQIH
CCCCCCCCCCCEECCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIFMVRSLGIEYFKPALLDDLLHITAQAAELGRSRITIAQRVLRGDVTLAAATVQAVCV
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVDSLKPVSVPAALRLKLGKLS
CCCCCCCCCCCHHHHHCCCCCC
>Mature Secondary Structure
MKMSYSSPEIPFSLPVRVYYQDTDAGGVVYHSTYLDFMERARYEWLRELGFHIHSLSQIH
CCCCCCCCCCCEECCEEEEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KVIFMVRSLGIEYFKPALLDDLLHITAQAAELGRSRITIAQRVLRGDVTLAAATVQAVCV
HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCHHHHHHHHHHHHH
GVDSLKPVSVPAALRLKLGKLS
CCCCCCCCCCCHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]