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The map label for this gene is tolR [H]

Identifier: 82703829

GI number: 82703829

Start: 3117771

End: 3118187

Strand: Reverse

Name: tolR [H]

Synonym: Nmul_A2716

Alternate gene names: 82703829

Gene position: 3118187-3117771 (Counterclockwise)

Preceding gene: 82703830

Following gene: 82703828

Centisome position: 97.93

GC content: 56.12

Gene sequence:

>417_bases
GTGAGTGAGCGGCGCGCCAGAAGGCGCCTGATGAACGAGATAAACGTAGTACCTTACATTGACGTGATGCTGGTGCTGCT
CGTCATTTTCATGATCACGGCGCCGCTCATCACTCCGGGCGAGATTGAGCTGCCGCAGGTTAGCAAGTCGCTATCCCCGC
CCGTCGCACCGCTGGAAGTGATCGTAAAGGCGAATGGAACCCTGAGGCTGAACGACCGTTCCGCCAGAGAGGGTGAGAAG
CAGGTCAGCCATACGGAGCTGGTTGAGGTGATCAAGCAGAAACAGGCGGCAAATGCCGAGCAGCCGGTAGTGATCGCGGG
CGACAAAAATGTGCGCTACGAGGAAGTGATGAATGTAATGGATATTCTGCAGCAGCAGCAGGTGAAGAAGGTAGGACTGC
TGGCTAGGTCGAAATGA

Upstream 100 bases:

>100_bases
CTACGCGGTTCGAGAGCTTCATGGAAGAAATGTCGAATGTTCTGCAGAGGCAGGCCGGCGGTTAGGAACGTGAACAGGAT
AATTTTGGAGAGCGGAGACT

Downstream 100 bases:

>100_bases
ACGCACTTCTGAAAATTCGGATTTGCAGTCGTCCGTTGCAAGCTTTTGTTGCCCTCAAAAGACGTGTTTCCGGACGTGCT
TCTGCTCATTCAGCGTATTT

Product: biopolymer transport protein ExbD/TolR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MSERRARRRLMNEINVVPYIDVMLVLLVIFMITAPLITPGEIELPQVSKSLSPPVAPLEVIVKANGTLRLNDRSAREGEK
QVSHTELVEVIKQKQAANAEQPVVIAGDKNVRYEEVMNVMDILQQQQVKKVGLLARSK

Sequences:

>Translated_138_residues
MSERRARRRLMNEINVVPYIDVMLVLLVIFMITAPLITPGEIELPQVSKSLSPPVAPLEVIVKANGTLRLNDRSAREGEK
QVSHTELVEVIKQKQAANAEQPVVIAGDKNVRYEEVMNVMDILQQQQVKKVGLLARSK
>Mature_137_residues
SERRARRRLMNEINVVPYIDVMLVLLVIFMITAPLITPGEIELPQVSKSLSPPVAPLEVIVKANGTLRLNDRSAREGEKQ
VSHTELVEVIKQKQAANAEQPVVIAGDKNVRYEEVMNVMDILQQQQVKKVGLLARSK

Specific function: Involved in the tonB-independent uptake of proteins [H]

COG id: COG0848

COG function: function code U; Biopolymer transport protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbD/tolR family [H]

Homologues:

Organism=Escherichia coli, GI1789380, Length=128, Percent_Identity=35.9375, Blast_Score=76, Evalue=9e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014168
- InterPro:   IPR003400 [H]

Pfam domain/function: PF02472 ExbD [H]

EC number: NA

Molecular weight: Translated: 15480; Mature: 15348

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSERRARRRLMNEINVVPYIDVMLVLLVIFMITAPLITPGEIELPQVSKSLSPPVAPLEV
CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHH
IVKANGTLRLNDRSAREGEKQVSHTELVEVIKQKQAANAEQPVVIAGDKNVRYEEVMNVM
EEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH
DILQQQQVKKVGLLARSK
HHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SERRARRRLMNEINVVPYIDVMLVLLVIFMITAPLITPGEIELPQVSKSLSPPVAPLEV
CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCHHHH
IVKANGTLRLNDRSAREGEKQVSHTELVEVIKQKQAANAEQPVVIAGDKNVRYEEVMNVM
EEECCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHH
DILQQQQVKKVGLLARSK
HHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8955385; 10984043 [H]