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The map label for this gene is ydhD [C]

Identifier: 82703752

GI number: 82703752

Start: 3025050

End: 3025370

Strand: Reverse

Name: ydhD [C]

Synonym: Nmul_A2639

Alternate gene names: 82703752

Gene position: 3025370-3025050 (Counterclockwise)

Preceding gene: 82703753

Following gene: 82703750

Centisome position: 95.01

GC content: 52.96

Gene sequence:

>321_bases
ATGGATACGCAGGAAATCATCAAGCAACAAGTGACCACGCATCCCGTGGTGCTCTACATGAAAGGTTCGCCGGCAGCCCC
GCAGTGCGGTTTTTCGGCCCATGCGGTAAAAATCCTCAATGCTTGCGGCGTGGATGATCTTTTCGCAGTGGATGTGCTCG
CCGAACCGGAATTCCGCCAAGGCATCAAGGATTACTCAAACTGGCCTACCATCCCGCAGCTCTATGTCAATGGAGAGTTT
ATCGGCGGCTCGGACATTGTTTCCGAAATGTACCAGAGCGGTGAGCTGCAAAAGCTGCTGGAAAGTGCCGAAGCAAAGTA
A

Upstream 100 bases:

>100_bases
GCTGCTAAAATGCGATATTAATACGATATATCGAAGAATTGCCTCCTCCTGGAGGGCTTTCCCCCGATAATCCGAACCAA
CGTTTTTTGAGGAGTCAGAT

Downstream 100 bases:

>100_bases
ATCCCGGTAATTGATCGATTGATTGGTATCGGCGGGGGGAATGCTGTCCGATGACCTCCCCTGAGTCCATCAACGAAGCT
TGGAGCTCAGGAAGCGGGGC

Product: glutaredoxin-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 106; Mature: 106

Protein sequence:

>106_residues
MDTQEIIKQQVTTHPVVLYMKGSPAAPQCGFSAHAVKILNACGVDDLFAVDVLAEPEFRQGIKDYSNWPTIPQLYVNGEF
IGGSDIVSEMYQSGELQKLLESAEAK

Sequences:

>Translated_106_residues
MDTQEIIKQQVTTHPVVLYMKGSPAAPQCGFSAHAVKILNACGVDDLFAVDVLAEPEFRQGIKDYSNWPTIPQLYVNGEF
IGGSDIVSEMYQSGELQKLLESAEAK
>Mature_106_residues
MDTQEIIKQQVTTHPVVLYMKGSPAAPQCGFSAHAVKILNACGVDDLFAVDVLAEPEFRQGIKDYSNWPTIPQLYVNGEF
IGGSDIVSEMYQSGELQKLLESAEAK

Specific function: Unknown

COG id: COG0278

COG function: function code O; Glutaredoxin-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 glutaredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI42516576, Length=86, Percent_Identity=59.3023255813954, Blast_Score=116, Evalue=4e-27,
Organism=Homo sapiens, GI95113651, Length=97, Percent_Identity=47.4226804123711, Blast_Score=96, Evalue=8e-21,
Organism=Escherichia coli, GI1787943, Length=105, Percent_Identity=55.2380952380952, Blast_Score=122, Evalue=7e-30,
Organism=Caenorhabditis elegans, GI71988159, Length=90, Percent_Identity=44.4444444444444, Blast_Score=91, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI71988153, Length=90, Percent_Identity=44.4444444444444, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17556042, Length=91, Percent_Identity=42.8571428571429, Blast_Score=84, Evalue=1e-17,
Organism=Saccharomyces cerevisiae, GI6325198, Length=106, Percent_Identity=50.9433962264151, Blast_Score=117, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6321022, Length=79, Percent_Identity=50.6329113924051, Blast_Score=87, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6320303, Length=79, Percent_Identity=51.8987341772152, Blast_Score=87, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24642023, Length=93, Percent_Identity=52.6881720430108, Blast_Score=107, Evalue=1e-24,
Organism=Drosophila melanogaster, GI19921242, Length=98, Percent_Identity=41.8367346938776, Blast_Score=93, Evalue=4e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002109
- InterPro:   IPR014434
- InterPro:   IPR004480
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00462 Glutaredoxin [H]

EC number: NA

Molecular weight: Translated: 11618; Mature: 11618

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTQEIIKQQVTTHPVVLYMKGSPAAPQCGFSAHAVKILNACGVDDLFAVDVLAEPEFRQ
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
GIKDYSNWPTIPQLYVNGEFIGGSDIVSEMYQSGELQKLLESAEAK
HHHHHCCCCCCCEEEECCEEECHHHHHHHHHHCCHHHHHHHHHCCC
>Mature Secondary Structure
MDTQEIIKQQVTTHPVVLYMKGSPAAPQCGFSAHAVKILNACGVDDLFAVDVLAEPEFRQ
CCHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCHHHH
GIKDYSNWPTIPQLYVNGEFIGGSDIVSEMYQSGELQKLLESAEAK
HHHHHCCCCCCCEEEECCEEECHHHHHHHHHHCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]