Click here to switch to the map view.

The map label for this gene is yukJ [H]

Identifier: 82703572

GI number: 82703572

Start: 2807579

End: 2808403

Strand: Reverse

Name: yukJ [H]

Synonym: Nmul_A2457

Alternate gene names: 82703572

Gene position: 2808403-2807579 (Counterclockwise)

Preceding gene: 82703573

Following gene: 82703571

Centisome position: 88.2

GC content: 56.97

Gene sequence:

>825_bases
ATGAGTCCTGAGCCTAGCCGGCTTGCATCCCACCCCGGCTCGGGCGCGCTTGATCTGATCCGCGGCAACCTCCTGCAACC
CGGGATGATGACGCCGCTTCCACACGATCTTCCCGGCCCCGATAATGACCTGAACGAGAAGCTCGACCAGATCGTGCAGC
GCGCGATGGCAGACGAAGAGGCCTTGGTTTACGCCTTTGGTGAAAGGTGGGGACCGGAGAGCAACAAGGCGGATAAGTAC
TTCGGTTTTCTACCCGGTAACGGCATACACGATATTCACATGAACCAGGGAAATGTCGGAAGCTTTATCAAGGATGATGG
AGTGTGGCAGGATGGCGGCGTGCTGTTCCATTTTCCTCTTCAGCAGCAGTGGACAGCCGTTTTCTTGAAATTTCAGTCGC
AAAGCTGGCATACCGACGACCGGACCGGCCGTACGTGGGCCGAAGGTGAAGAGGGGGAACCGAGGAATCCGGATCCGGTC
GTGCCGCAGCCAACCCAAGCTCTCCCGGATGGCCTGGTGCGCATTGTTTCGGCAATGGTTAATTCGATCGAATCTCCCGA
AAAGGAGTGGGTCAATATATTGAACGCAAGTGATCGCGCCATTTCCCTCGCGGGCTGGCAACTGGCTGACAAGCACAAAG
CAAAAATGCCGTTGAGCGGGGCCATAGAGCCGGGTGCGATGCTCCGGATCGATATTCAACCTCCGGTCGCCCTGTCCAAC
AAGGGAGGCATCATCACTTTGCTGAACCAGGACGGTCTGAAGGTGCATGGCGTGTCCTATACCAGGCAGCAGGCAAATCA
GCCGGGGTGGACGATCGTTTTTTAG

Upstream 100 bases:

>100_bases
TCAAGGACTGGCGCAGGATCGCCATGCGTTACGACCGCTGTGCCCATACCTTCTTCTCTGCCATCTGTATCGCCGCAACT
GTCATCTTCTATCTCAATTA

Downstream 100 bases:

>100_bases
CAAGGCGCGATTTATCCATTTGATCACGACAAACTGGCGCGTAACTTGGCCGGAGCCCGTTATAATAGCGGCTGTGTAAC
AGCCGAGAAGGTTGTCGTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 274; Mature: 273

Protein sequence:

>274_residues
MSPEPSRLASHPGSGALDLIRGNLLQPGMMTPLPHDLPGPDNDLNEKLDQIVQRAMADEEALVYAFGERWGPESNKADKY
FGFLPGNGIHDIHMNQGNVGSFIKDDGVWQDGGVLFHFPLQQQWTAVFLKFQSQSWHTDDRTGRTWAEGEEGEPRNPDPV
VPQPTQALPDGLVRIVSAMVNSIESPEKEWVNILNASDRAISLAGWQLADKHKAKMPLSGAIEPGAMLRIDIQPPVALSN
KGGIITLLNQDGLKVHGVSYTRQQANQPGWTIVF

Sequences:

>Translated_274_residues
MSPEPSRLASHPGSGALDLIRGNLLQPGMMTPLPHDLPGPDNDLNEKLDQIVQRAMADEEALVYAFGERWGPESNKADKY
FGFLPGNGIHDIHMNQGNVGSFIKDDGVWQDGGVLFHFPLQQQWTAVFLKFQSQSWHTDDRTGRTWAEGEEGEPRNPDPV
VPQPTQALPDGLVRIVSAMVNSIESPEKEWVNILNASDRAISLAGWQLADKHKAKMPLSGAIEPGAMLRIDIQPPVALSN
KGGIITLLNQDGLKVHGVSYTRQQANQPGWTIVF
>Mature_273_residues
SPEPSRLASHPGSGALDLIRGNLLQPGMMTPLPHDLPGPDNDLNEKLDQIVQRAMADEEALVYAFGERWGPESNKADKYF
GFLPGNGIHDIHMNQGNVGSFIKDDGVWQDGGVLFHFPLQQQWTAVFLKFQSQSWHTDDRTGRTWAEGEEGEPRNPDPVV
PQPTQALPDGLVRIVSAMVNSIESPEKEWVNILNASDRAISLAGWQLADKHKAKMPLSGAIEPGAMLRIDIQPPVALSNK
GGIITLLNQDGLKVHGVSYTRQQANQPGWTIVF

Specific function: Unknown

COG id: COG5634

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019268 [H]

Pfam domain/function: PF10042 DUF2278 [H]

EC number: NA

Molecular weight: Translated: 30106; Mature: 29975

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPEPSRLASHPGSGALDLIRGNLLQPGMMTPLPHDLPGPDNDLNEKLDQIVQRAMADEE
CCCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
ALVYAFGERWGPESNKADKYFGFLPGNGIHDIHMNQGNVGSFIKDDGVWQDGGVLFHFPL
EEEEEECHHCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEECCCCCCCCCCEEEEECC
QQQWTAVFLKFQSQSWHTDDRTGRTWAEGEEGEPRNPDPVVPQPTQALPDGLVRIVSAMV
HHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
NSIESPEKEWVNILNASDRAISLAGWQLADKHKAKMPLSGAIEPGAMLRIDIQPPVALSN
HHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECC
KGGIITLLNQDGLKVHGVSYTRQQANQPGWTIVF
CCCEEEEECCCCCEEECCCHHHHHCCCCCEEEEC
>Mature Secondary Structure 
SPEPSRLASHPGSGALDLIRGNLLQPGMMTPLPHDLPGPDNDLNEKLDQIVQRAMADEE
CCCCCHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC
ALVYAFGERWGPESNKADKYFGFLPGNGIHDIHMNQGNVGSFIKDDGVWQDGGVLFHFPL
EEEEEECHHCCCCCCCCCCEEEECCCCCEEEEECCCCCCCCEECCCCCCCCCCEEEEECC
QQQWTAVFLKFQSQSWHTDDRTGRTWAEGEEGEPRNPDPVVPQPTQALPDGLVRIVSAMV
HHCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
NSIESPEKEWVNILNASDRAISLAGWQLADKHKAKMPLSGAIEPGAMLRIDIQPPVALSN
HHCCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEECC
KGGIITLLNQDGLKVHGVSYTRQQANQPGWTIVF
CCCEEEEECCCCCEEECCCHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9168598; 9384377; 8226620 [H]