| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82703548
Identifier: 82703548
GI number: 82703548
Start: 2774110
End: 2775477
Strand: Reverse
Name: 82703548
Synonym: Nmul_A2433
Alternate gene names: NA
Gene position: 2775477-2774110 (Counterclockwise)
Preceding gene: 82703549
Following gene: 82703547
Centisome position: 87.16
GC content: 42.47
Gene sequence:
>1368_bases ATGGCTGGTATTGGGTTTAGACTACGTGAACTGACAGGCACTGATACTCTATCAGGGCTTACGCTCGCTTATGGTTTTGC GGGGATTATAGGTTCTGGCCCATGGGTATTGTCGATTGTTGGCATCCTCTTAATCGGCATCATCAACACGGAAAACTCAA CCGCTCCTTATTATGTTGAGCAGTTTCAGATATCCATAACTTATTTGATGGCGATTTCTTTGATTCTGACCAGTCCCTTG CAACTGATGATCACACGCTTTATTGCTGACAAGTTGTATGAAAAACAGGACGAAAAGGTTTTACCGAACCTAACAGGGGC CATTTTTATTGTAGTGATTGTCAGCGGAACGATTGCGGCTCTATCCCTGATTTACCTGTTTAGCGGATCGGTGCTATATC GTTTATTGATGCTGGCCGGGCTGGTTATCCTTTCTACCATTTGGATTGTAGTGATCGTTTTATCGGGGCTGAAGGCTTAC CGTGCAGTTTTGTTAGCCTTTCTGGTAGGTTATGGCGTAACAGTATTGGCTTCTATGGAAATGAAGGCATTTGGGCTGGA AGGACTGCTTTCCGGTTTTGTTTTGGGGCATGCCATTTTATTGTTTATGCTCCTGGTTGTGGTTTTTCGCTCGTATTCAA GGGATAAGTTGATGGCCTTTGATTTTTTACAGCGAAGTCAGATATTCCCGAGCCTAGCGATTACCGGCTTTCTTTATAAC CTCGCTATTTGGGTTGACAAATTTATTTTCTGGTTTAATCCTCAAACCGGCGTTGCGGTCATTTCGCCCCTCCGGGGCTC GCAAATTTATGACCTTCCAATATTTCTTGCATATTTATCGATCATACCGGGAATGGCGGTATTTTTGCTGCGCATGGAGA CTGATTTTGTAGAACAGTACACAAAGTTTTATGCAGCTATTAATGGCGGCGCTCCCTTAAAGCCTATCTTACAAATCTAT GAAGAAATGGTCCTGACAATTCAGAGAGGATTTATTGAAATCTTTAAGGTACAAGGAATGACCATCATTATATTGCTGGC AGTAGGGGAAAAATTGCTTGAATGGGTAGGAATATCGCCTTTCTATAGCATGCTGTTAAATATTGACCTTGTTGCGGTGG GTGTTCAAGTATTATTGCTGGCTGTTCTAAACATATTATTTTATTTCGATTATCGTAAAGATGCCTTGTATCTCTGTTTG CTATGTGTCACCTCGAACATTGTATTCACCCTTTTGAGTCAATACCTTGGGCCCGCATTTTATGGCTACGGTTTTGCCTT GTCGGTTGTAACAACGACCCTGGTGGGGATGATCATCGTTTCAAAAAGACTTAATGGGCTGGTTTACGAAACATTCATGC TGCGTTAA
Upstream 100 bases:
>100_bases GGCATGAAGATGATAGCAAGTGGGCTATGCAGCATGTGCCCTCTGGAGTTTTTGCAATTCCTGACACCAAAAGTCTCCGA GTTCTGGGCGGGCTCCGATA
Downstream 100 bases:
>100_bases ATCAACTATGCTTACGTATATAAATAATCACTGACAGACCCCGGGAATGAGTGATTTTCATCGACGTTCCATCGATTGAT GAAAGGCAGTCCGATATTTG
Product: hypothetical protein
Products: NA
Alternate protein names: Inner Membrane Protein; Polysaccharide Synthase Transmembrane Protein; Transmembrane Protein Cog
Number of amino acids: Translated: 455; Mature: 454
Protein sequence:
>455_residues MAGIGFRLRELTGTDTLSGLTLAYGFAGIIGSGPWVLSIVGILLIGIINTENSTAPYYVEQFQISITYLMAISLILTSPL QLMITRFIADKLYEKQDEKVLPNLTGAIFIVVIVSGTIAALSLIYLFSGSVLYRLLMLAGLVILSTIWIVVIVLSGLKAY RAVLLAFLVGYGVTVLASMEMKAFGLEGLLSGFVLGHAILLFMLLVVVFRSYSRDKLMAFDFLQRSQIFPSLAITGFLYN LAIWVDKFIFWFNPQTGVAVISPLRGSQIYDLPIFLAYLSIIPGMAVFLLRMETDFVEQYTKFYAAINGGAPLKPILQIY EEMVLTIQRGFIEIFKVQGMTIIILLAVGEKLLEWVGISPFYSMLLNIDLVAVGVQVLLLAVLNILFYFDYRKDALYLCL LCVTSNIVFTLLSQYLGPAFYGYGFALSVVTTTLVGMIIVSKRLNGLVYETFMLR
Sequences:
>Translated_455_residues MAGIGFRLRELTGTDTLSGLTLAYGFAGIIGSGPWVLSIVGILLIGIINTENSTAPYYVEQFQISITYLMAISLILTSPL QLMITRFIADKLYEKQDEKVLPNLTGAIFIVVIVSGTIAALSLIYLFSGSVLYRLLMLAGLVILSTIWIVVIVLSGLKAY RAVLLAFLVGYGVTVLASMEMKAFGLEGLLSGFVLGHAILLFMLLVVVFRSYSRDKLMAFDFLQRSQIFPSLAITGFLYN LAIWVDKFIFWFNPQTGVAVISPLRGSQIYDLPIFLAYLSIIPGMAVFLLRMETDFVEQYTKFYAAINGGAPLKPILQIY EEMVLTIQRGFIEIFKVQGMTIIILLAVGEKLLEWVGISPFYSMLLNIDLVAVGVQVLLLAVLNILFYFDYRKDALYLCL LCVTSNIVFTLLSQYLGPAFYGYGFALSVVTTTLVGMIIVSKRLNGLVYETFMLR >Mature_454_residues AGIGFRLRELTGTDTLSGLTLAYGFAGIIGSGPWVLSIVGILLIGIINTENSTAPYYVEQFQISITYLMAISLILTSPLQ LMITRFIADKLYEKQDEKVLPNLTGAIFIVVIVSGTIAALSLIYLFSGSVLYRLLMLAGLVILSTIWIVVIVLSGLKAYR AVLLAFLVGYGVTVLASMEMKAFGLEGLLSGFVLGHAILLFMLLVVVFRSYSRDKLMAFDFLQRSQIFPSLAITGFLYNL AIWVDKFIFWFNPQTGVAVISPLRGSQIYDLPIFLAYLSIIPGMAVFLLRMETDFVEQYTKFYAAINGGAPLKPILQIYE EMVLTIQRGFIEIFKVQGMTIIILLAVGEKLLEWVGISPFYSMLLNIDLVAVGVQVLLLAVLNILFYFDYRKDALYLCLL CVTSNIVFTLLSQYLGPAFYGYGFALSVVTTTLVGMIIVSKRLNGLVYETFMLR
Specific function: Unknown
COG id: COG4267
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50483; Mature: 50351
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGIGFRLRELTGTDTLSGLTLAYGFAGIIGSGPWVLSIVGILLIGIINTENSTAPYYVE CCCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH QFQISITYLMAISLILTSPLQLMITRFIADKLYEKQDEKVLPNLTGAIFIVVIVSGTIAA HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHH LSLIYLFSGSVLYRLLMLAGLVILSTIWIVVIVLSGLKAYRAVLLAFLVGYGVTVLASME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKAFGLEGLLSGFVLGHAILLFMLLVVVFRSYSRDKLMAFDFLQRSQIFPSLAITGFLYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH LAIWVDKFIFWFNPQTGVAVISPLRGSQIYDLPIFLAYLSIIPGMAVFLLRMETDFVEQY HHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKFYAAINGGAPLKPILQIYEEMVLTIQRGFIEIFKVQGMTIIILLAVGEKLLEWVGISP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH FYSMLLNIDLVAVGVQVLLLAVLNILFYFDYRKDALYLCLLCVTSNIVFTLLSQYLGPAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHH YGYGFALSVVTTTLVGMIIVSKRLNGLVYETFMLR HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC >Mature Secondary Structure AGIGFRLRELTGTDTLSGLTLAYGFAGIIGSGPWVLSIVGILLIGIINTENSTAPYYVE CCCCHHHHHCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHH QFQISITYLMAISLILTSPLQLMITRFIADKLYEKQDEKVLPNLTGAIFIVVIVSGTIAA HHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHHHHHHHH LSLIYLFSGSVLYRLLMLAGLVILSTIWIVVIVLSGLKAYRAVLLAFLVGYGVTVLASME HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MKAFGLEGLLSGFVLGHAILLFMLLVVVFRSYSRDKLMAFDFLQRSQIFPSLAITGFLYN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHH LAIWVDKFIFWFNPQTGVAVISPLRGSQIYDLPIFLAYLSIIPGMAVFLLRMETDFVEQY HHHHHHHHHHEECCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TKFYAAINGGAPLKPILQIYEEMVLTIQRGFIEIFKVQGMTIIILLAVGEKLLEWVGISP HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCH FYSMLLNIDLVAVGVQVLLLAVLNILFYFDYRKDALYLCLLCVTSNIVFTLLSQYLGPAF HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCHHH YGYGFALSVVTTTLVGMIIVSKRLNGLVYETFMLR HHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA