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The map label for this gene is secF [H]

Identifier: 82703541

GI number: 82703541

Start: 2763872

End: 2764804

Strand: Reverse

Name: secF [H]

Synonym: Nmul_A2426

Alternate gene names: 82703541

Gene position: 2764804-2763872 (Counterclockwise)

Preceding gene: 82703542

Following gene: 82703540

Centisome position: 86.83

GC content: 53.8

Gene sequence:

>933_bases
ATGGAATTTTTCAGGTTCAAGCGCGATATCCCTTTCATGAGCTGGGGGAAATATACGACGGCCATTTCCCTGGTTACTTT
TATTGCGGCGGTATTTTTCCTTGTTACCAAGGGGTTGAATCTGGGGGTTGATTTTACCGGCGGAACGGTCATGGAAGTCA
GCTACACCCAGCCGGCGGATCTCAACCGCATCCGGGGCACCTTGATCAAGCTCGGAATGGCTGACGCCAGCGTGCAGAAT
TTCGGCACTTCGCGGGATGTGCTGATACGCTTGCCAGCCAAGGCCGACATGTCGAGCGCAAAGCTTTCCGAGACAGTGAT
CGCCGCGTTGCATGCGGATGATGAGACGGCGGAGTTGCGCCGGGTAGAGTTTGTAGGCCCTCAAGTGGGCAAGGAATTGG
TGGAAAACGGCGCACTGGCCTTGCTGATTGTGTCGCTGGGGATCGTCGCTTATTTGGCAATGCGGTTCGAGTGGAAATTC
GGTGTTTCCGGCATCATCGCCAATTTGCATGACGTCGTGATTATCCTGGGATTTTTCGCATTCTTCCAGTGGGAATTTTC
ACTCACGGTTCTTGCCGCCATACTGGCGATTCTGGGGTATTCGGTAAACGAATCGGTGGTGGTATTCGACCGGATACGCG
AGAACTTCCGTAAAATGCGCCGGGCATCGGTGGCGCAAGTCATCGACAATGCCATAACCCGAACCATGTCGCGTACCATC
ATCACGCATGGCAGCACCCAGATGGTCGTTGTATCGATGCTGCTTTTCGGCGGCGAATCCCTGCATTACTTCGCTCTGGC
CCTCACCATCGGCATTCTGTTCGGCATTTATTCCTCTGTGCTGGTCGCAAGCCCCCTTCTCATGCTATTGGGTGTTTCGC
GCAAGGATATTGTCAAACCCGAAAAGAAGCCTGAACCGGAAGCGGTACCTTGA

Upstream 100 bases:

>100_bases
AAACTGGAGCGGGTTTCCATTGGGCAGGTGTGGAAGCCTGTGACCAACAAGCGCTGACAGCGAAAAAAAAGCGTACCTTT
GGAGAAAATAAGGGTCATCA

Downstream 100 bases:

>100_bases
ACCGGAATCCATAAATCAAACTCAGGCTTTTCCCTCTGGGGGGCCTTTCATATCCATTCAGTCCATTTTGGAAATTATTG
CCACCTTTATCGACATCATC

Product: preprotein translocase subunit SecF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MEFFRFKRDIPFMSWGKYTTAISLVTFIAAVFFLVTKGLNLGVDFTGGTVMEVSYTQPADLNRIRGTLIKLGMADASVQN
FGTSRDVLIRLPAKADMSSAKLSETVIAALHADDETAELRRVEFVGPQVGKELVENGALALLIVSLGIVAYLAMRFEWKF
GVSGIIANLHDVVIILGFFAFFQWEFSLTVLAAILAILGYSVNESVVVFDRIRENFRKMRRASVAQVIDNAITRTMSRTI
ITHGSTQMVVVSMLLFGGESLHYFALALTIGILFGIYSSVLVASPLLMLLGVSRKDIVKPEKKPEPEAVP

Sequences:

>Translated_310_residues
MEFFRFKRDIPFMSWGKYTTAISLVTFIAAVFFLVTKGLNLGVDFTGGTVMEVSYTQPADLNRIRGTLIKLGMADASVQN
FGTSRDVLIRLPAKADMSSAKLSETVIAALHADDETAELRRVEFVGPQVGKELVENGALALLIVSLGIVAYLAMRFEWKF
GVSGIIANLHDVVIILGFFAFFQWEFSLTVLAAILAILGYSVNESVVVFDRIRENFRKMRRASVAQVIDNAITRTMSRTI
ITHGSTQMVVVSMLLFGGESLHYFALALTIGILFGIYSSVLVASPLLMLLGVSRKDIVKPEKKPEPEAVP
>Mature_310_residues
MEFFRFKRDIPFMSWGKYTTAISLVTFIAAVFFLVTKGLNLGVDFTGGTVMEVSYTQPADLNRIRGTLIKLGMADASVQN
FGTSRDVLIRLPAKADMSSAKLSETVIAALHADDETAELRRVEFVGPQVGKELVENGALALLIVSLGIVAYLAMRFEWKF
GVSGIIANLHDVVIILGFFAFFQWEFSLTVLAAILAILGYSVNESVVVFDRIRENFRKMRRASVAQVIDNAITRTMSRTI
ITHGSTQMVVVSMLLFGGESLHYFALALTIGILFGIYSSVLVASPLLMLLGVSRKDIVKPEKKPEPEAVP

Specific function: Involved in protein export [H]

COG id: COG0341

COG function: function code U; Preprotein translocase subunit SecF

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secD/secF family. SecF subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786610, Length=305, Percent_Identity=39.672131147541, Blast_Score=247, Evalue=9e-67,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022813
- InterPro:   IPR022646
- InterPro:   IPR022645
- InterPro:   IPR005665 [H]

Pfam domain/function: PF07549 Sec_GG; PF02355 SecD_SecF [H]

EC number: NA

Molecular weight: Translated: 34110; Mature: 34110

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFFRFKRDIPFMSWGKYTTAISLVTFIAAVFFLVTKGLNLGVDFTGGTVMEVSYTQPAD
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCH
LNRIRGTLIKLGMADASVQNFGTSRDVLIRLPAKADMSSAKLSETVIAALHADDETAELR
HHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
RVEFVGPQVGKELVENGALALLIVSLGIVAYLAMRFEWKFGVSGIIANLHDVVIILGFFA
HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FFQWEFSLTVLAAILAILGYSVNESVVVFDRIRENFRKMRRASVAQVIDNAITRTMSRTI
HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHGSTQMVVVSMLLFGGESLHYFALALTIGILFGIYSSVLVASPLLMLLGVSRKDIVKP
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
EKKPEPEAVP
CCCCCCCCCC
>Mature Secondary Structure
MEFFRFKRDIPFMSWGKYTTAISLVTFIAAVFFLVTKGLNLGVDFTGGTVMEVSYTQPAD
CCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCEEEEEECCCCCH
LNRIRGTLIKLGMADASVQNFGTSRDVLIRLPAKADMSSAKLSETVIAALHADDETAELR
HHHHHHHHHHHCCCHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHHHH
RVEFVGPQVGKELVENGALALLIVSLGIVAYLAMRFEWKFGVSGIIANLHDVVIILGFFA
HHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FFQWEFSLTVLAAILAILGYSVNESVVVFDRIRENFRKMRRASVAQVIDNAITRTMSRTI
HHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITHGSTQMVVVSMLLFGGESLHYFALALTIGILFGIYSSVLVASPLLMLLGVSRKDIVKP
HCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCC
EKKPEPEAVP
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]