Click here to switch to the map view.

The map label for this gene is yaeJ [C]

Identifier: 82703524

GI number: 82703524

Start: 2745912

End: 2746334

Strand: Direct

Name: yaeJ [C]

Synonym: Nmul_A2409

Alternate gene names: 82703524

Gene position: 2745912-2746334 (Clockwise)

Preceding gene: 82703523

Following gene: 82703528

Centisome position: 86.23

GC content: 52.72

Gene sequence:

>423_bases
ATGGCAGCCTTCGAAAAAATAGATATTCCCGATCATGAGGTCGAAATAAAGGCAATTCGCGCGCAAGGCGCCGGAGGGCA
GAATGTAAACAAGGTATCGAGCGCCGTTCATCTGCGCTTCGATATCAACGCTTCGTCGCTATCCGATATCCACAAGGAGC
GTTTGCTGAAGCTCCACGATCAGCGTATAACCCGCGAGGGCGTGATCATTATCAAGGCTCAGCAGTATCGCAGCCAGGAG
AAAAACCGCGAGGAAGCCTTAAGACGCCTGCACGAACTTGTAGACAGCATCGTTGAGTTGCCGCGAAAACGCAAGCCGAC
CCGGCCGACGGCGAGCTCCCAGAAAAAGCGGCTTGATAGCAAGACACACAAGGGCCAGATCAAGATCTTGAGAAAGAAAT
GGGTATCGGAACCGATGTCGTGA

Upstream 100 bases:

>100_bases
TGAATGTCGATCTGTGTTTTGACCATACGGAAGCGACCGGCGATTTCGGTTTCGCGCCCAGGGCGTTCTCACCTGAATGG
GATGGCGGACAGGAAAAGTG

Downstream 100 bases:

>100_bases
TGCACCCAATCTTTTCCTTTGCCTTCCCTCTCCCTGTCCTCTCTCCGCCAAATGGGAGAGGACATGTTTCAATGAGTGGA
AGCGAGTTCGTTTCCGTCTT

Product: class I peptide chain release factor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MAAFEKIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHDQRITREGVIIIKAQQYRSQE
KNREEALRRLHELVDSIVELPRKRKPTRPTASSQKKRLDSKTHKGQIKILRKKWVSEPMS

Sequences:

>Translated_140_residues
MAAFEKIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHDQRITREGVIIIKAQQYRSQE
KNREEALRRLHELVDSIVELPRKRKPTRPTASSQKKRLDSKTHKGQIKILRKKWVSEPMS
>Mature_139_residues
AAFEKIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHDQRITREGVIIIKAQQYRSQEK
NREEALRRLHELVDSIVELPRKRKPTRPTASSQKKRLDSKTHKGQIKILRKKWVSEPMS

Specific function: Unknown

COG id: COG1186

COG function: function code J; Protein chain release factor B

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the prokaryotic/mitochondrial release factor family [H]

Homologues:

Organism=Escherichia coli, GI1786389, Length=127, Percent_Identity=55.9055118110236, Blast_Score=143, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000352 [H]

Pfam domain/function: PF00472 RF-1 [H]

EC number: NA

Molecular weight: Translated: 16132; Mature: 16001

Theoretical pI: Translated: 10.99; Mature: 10.99

Prosite motif: PS00745 RF_PROK_I

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAFEKIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHD
CCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHH
QRITREGVIIIKAQQYRSQEKNREEALRRLHELVDSIVELPRKRKPTRPTASSQKKRLDS
HHHCCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
KTHKGQIKILRKKWVSEPMS
HCCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure 
AAFEKIDIPDHEVEIKAIRAQGAGGQNVNKVSSAVHLRFDINASSLSDIHKERLLKLHD
CCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHH
QRITREGVIIIKAQQYRSQEKNREEALRRLHELVDSIVELPRKRKPTRPTASSQKKRLDS
HHHCCCCEEEEECHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
KTHKGQIKILRKKWVSEPMS
HCCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624453 [H]