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The map label for this gene is exbB [H]

Identifier: 82703417

GI number: 82703417

Start: 2617488

End: 2618135

Strand: Direct

Name: exbB [H]

Synonym: Nmul_A2300

Alternate gene names: 82703417

Gene position: 2617488-2618135 (Clockwise)

Preceding gene: 82703411

Following gene: 82703418

Centisome position: 82.2

GC content: 56.64

Gene sequence:

>648_bases
ATGCAGGAACTGAATGCAACCTGGACCGCGCTGAAACTCGGCGGCTTTACCGTTTTGCCGCTGTCATTGCTGGCGGTGAT
CGCATTGGCGATCATGCTTGAAAAAGCGTTCATCTATTGGAAGTTTGCCCGCCTGTCTCACGACCTGCTGAATCTGGTTG
AGACTTACGGCTTTGCATGGGCCGATCTGGAAAAAATACTCTCCGGATTGGATGATCGCCACTACTACAAGCGCTTCTTC
GAGGTTGTGATCAGTAACAGGCACCATCCGTCCTGGTGGACGGAATCGCGCGCGGCAGACGAAGCCCAGTTAATCGAGAC
ATCGCTGGGACGCCGGTTGTGGGTATTGGAAACAATCGTCACCGCGGCGCCCCTGCTCGGGCTTGTCGGGACCGTTATCG
GCATGATGCGCGCTTTCCAGGTCATTGGCGGCGAAGGGGTGGTTAACCCGACGGCCGTGACCGGAGGAGTAGCCGAAGCG
CTTATCGCCACCGTCGTTGGCCTCCTGATTGCGCTGATTGCGCTCTTCGGCTTCAATTACTTCTCCCGCCTTCAATCCCA
AACGATGGATGAGATGGAACGACTGGGCACGCGCCTCATCGATCATATTCGCCTGGATCAGGAGGAGAGCGGTCATGAAG
CGGCGTAA

Upstream 100 bases:

>100_bases
GGAGCGCGTCTCCCCAGCTGCAGGAAATTGCAAGGCCTGGAGAAACAGTTGTCGATAATTTAATCAACATGGGACTTGTC
GTCCCCGCTCGGAGATAAAC

Downstream 100 bases:

>100_bases
ACCCAGGGAATACCGCAGGGGGCGCATCGAAATCATCCCGATGATCGACGTGATGTTTTTCCTGCTTGCCACATTCATGC
TATCGTCATTATCGATGCAG

Product: MotA/TolQ/ExbB proton channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 215; Mature: 215

Protein sequence:

>215_residues
MQELNATWTALKLGGFTVLPLSLLAVIALAIMLEKAFIYWKFARLSHDLLNLVETYGFAWADLEKILSGLDDRHYYKRFF
EVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETIVTAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEA
LIATVVGLLIALIALFGFNYFSRLQSQTMDEMERLGTRLIDHIRLDQEESGHEAA

Sequences:

>Translated_215_residues
MQELNATWTALKLGGFTVLPLSLLAVIALAIMLEKAFIYWKFARLSHDLLNLVETYGFAWADLEKILSGLDDRHYYKRFF
EVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETIVTAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEA
LIATVVGLLIALIALFGFNYFSRLQSQTMDEMERLGTRLIDHIRLDQEESGHEAA
>Mature_215_residues
MQELNATWTALKLGGFTVLPLSLLAVIALAIMLEKAFIYWKFARLSHDLLNLVETYGFAWADLEKILSGLDDRHYYKRFF
EVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETIVTAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEA
LIATVVGLLIALIALFGFNYFSRLQSQTMDEMERLGTRLIDHIRLDQEESGHEAA

Specific function: Involved in the tonB-dependent energy-dependent transport of various receptor-bound substrates. Protects exbD from proteolytic degradation and functionally stabilizes tonB [H]

COG id: COG0811

COG function: function code U; Biopolymer transport proteins

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the exbB/tolQ family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002898 [H]

Pfam domain/function: PF01618 MotA_ExbB [H]

EC number: NA

Molecular weight: Translated: 23945; Mature: 23945

Theoretical pI: Translated: 5.28; Mature: 5.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQELNATWTALKLGGFTVLPLSLLAVIALAIMLEKAFIYWKFARLSHDLLNLVETYGFAW
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ADLEKILSGLDDRHYYKRFFEVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETIV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHCCHHHHHHHHH
TAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEALIATVVGLLIALIALFGFNY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSRLQSQTMDEMERLGTRLIDHIRLDQEESGHEAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MQELNATWTALKLGGFTVLPLSLLAVIALAIMLEKAFIYWKFARLSHDLLNLVETYGFAW
CCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHH
ADLEKILSGLDDRHYYKRFFEVVISNRHHPSWWTESRAADEAQLIETSLGRRLWVLETIV
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCHHHCHHHHHHHHHHHCCHHHHHHHHH
TAAPLLGLVGTVIGMMRAFQVIGGEGVVNPTAVTGGVAEALIATVVGLLIALIALFGFNY
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FSRLQSQTMDEMERLGTRLIDHIRLDQEESGHEAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9371459 [H]