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The map label for this gene is clpS

Identifier: 82703365

GI number: 82703365

Start: 2552712

End: 2553020

Strand: Direct

Name: clpS

Synonym: Nmul_A2247

Alternate gene names: 82703365

Gene position: 2552712-2553020 (Clockwise)

Preceding gene: 82703363

Following gene: 82703366

Centisome position: 80.17

GC content: 45.63

Gene sequence:

>309_bases
ATGGCTGCAAGAAATCATGGTGAGGTTGTACTTGAGGCTAAAAAGAGTAAACTCAAGCCGCCGCCAATGTTCAAGGTTAT
TTTGCTGAATGATGACTTCACTCCGATGGATTTCGTGGTGACTGTATTACAGACTTTTTTTTCCATGAACCGAGAACAGG
CGACACAAATCATGCTCAAAGTCCATATGGACGGAGCTGGAGTATGTGGAGTTTATCCCAATGATGTGGCTTCCACAAAA
GTCGAACAGGTGGTTGCATTTGCAAGGCAGCATCAGCATCCGCTACAGTGCGTGATGGAGGAGAACTGA

Upstream 100 bases:

>100_bases
AATTTTCTAAAAGGTACTTGAATATTTCAGCGCAATCATCAAATATAAAGATTGGAAGTGGTTATATTTCGGTTTTAATT
AAAGGCAAGAATACAGGATC

Downstream 100 bases:

>100_bases
AATGATTGCTCAAGAATTAGAGGTAAGTCTGCATATGGCATTCGTGGAATCGCGTCAGAAGCGCCACGAGTTCATTACGG
TCGAGCATCTGTTACTGGCC

Product: ATP-dependent Clp protease adaptor protein ClpS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 102; Mature: 101

Protein sequence:

>102_residues
MAARNHGEVVLEAKKSKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLKVHMDGAGVCGVYPNDVASTK
VEQVVAFARQHQHPLQCVMEEN

Sequences:

>Translated_102_residues
MAARNHGEVVLEAKKSKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLKVHMDGAGVCGVYPNDVASTK
VEQVVAFARQHQHPLQCVMEEN
>Mature_101_residues
AARNHGEVVLEAKKSKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLKVHMDGAGVCGVYPNDVASTKV
EQVVAFARQHQHPLQCVMEEN

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

Organism=Escherichia coli, GI1787108, Length=90, Percent_Identity=54.4444444444444, Blast_Score=112, Evalue=6e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS_NITMU (Q2Y6T2)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_412931.1
- ProteinModelPortal:   Q2Y6T2
- SMR:   Q2Y6T2
- STRING:   Q2Y6T2
- GeneID:   3785024
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A2247
- eggNOG:   COG2127
- HOGENOM:   HBG644923
- OMA:   FVIHILE
- PhylomeDB:   Q2Y6T2
- BioCyc:   NMUL323848:NMUL_A2247-MONOMER
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11474; Mature: 11342

Theoretical pI: Translated: 6.94; Mature: 6.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
6.9 %Met     (Translated Protein)
8.8 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
7.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAARNHGEVVLEAKKSKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLK
CCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHEE
VHMDGAGVCGVYPNDVASTKVEQVVAFARQHQHPLQCVMEEN
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC
>Mature Secondary Structure 
AARNHGEVVLEAKKSKLKPPPMFKVILLNDDFTPMDFVVTVLQTFFSMNREQATQIMLK
CCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHEE
VHMDGAGVCGVYPNDVASTKVEQVVAFARQHQHPLQCVMEEN
EECCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA