| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is yfiS [H]
Identifier: 82702930
GI number: 82702930
Start: 2066832
End: 2068493
Strand: Direct
Name: yfiS [H]
Synonym: Nmul_A1807
Alternate gene names: 82702930
Gene position: 2066832-2068493 (Clockwise)
Preceding gene: 82702929
Following gene: 82702931
Centisome position: 64.91
GC content: 59.87
Gene sequence:
>1662_bases GTGACCAAACAAGCCCGCAATAAAGAATCGAACCGGGGACGCTCCGGCACTTGGGAACCGCTCAAGATACTGCCATTCAG GGCATTCTGGTTCGCCGCGCTTGGCTCCAACATCGGAACGTGGATCAATGGCGTATCCTCCGCCTGGGTAATGACCGACC TGTCTCCCTCACCGGTGATGGTGTCCCTGGTGCAGGCGGCCACTTCGTTGCCCATGGTACTGTTCGCGCTGGCTGCAGGT GCGCTGACCGACATTGTAGACCGACGGCGTTATCTTCTCTTCACGCAGATATGGATGGCCGCGGCTGCGGCAATGCTCAC CGTACTTGCTGCTATCGATCAGATCGATATCTGGAACCTCCTGATTCTGACCTTTGCTTTGGGCATTGGCGCATCACTGG CAACTCCCGCGCTGAATATCACTGCCCCCGAGCTTGTTCCCAGGAGTATGTTGCCGGAAGCGGTCGCATTGAGTTCATTG TCGATGAACCTGTCGCGTTCCCTCGGCCCAGCCATTGCCGGCGTATTGCTGGCCCAGATCGGCCCATGGGCCGCTTATGG CCTGAATGCGCTCTCGTTTATAGGCATGATTGTCGTCCTCTGGAGATGGAAGCGCGAACCGGAAGAGCGGTCGCTGCCAC CCGAACGCTTCTTCCAGGCATTGCGCGCCGGGGTACGTTATGCTCATGTAGCATCGCCTTTCCGAGCGGTGCTGATTCGT ACCACGGCTTTTATTCTCTTCGCAGCTTCGGGATGGGCGCTTCTTCCGCTGATTGCACGGGTCGAACTGGGCGGGGGACC CGGAACTTATGGACTCTTGCTCTCCTTCGTCGGTATTGGGGCGGTGTGCGGTATCCTTGTTCTGCCCCGGCTGCATGAAC TCGCCTCCCGCGATCGCCTGGTGCTGGCGGCAAGCCTGATTTATGGGGCAACGATCATGGCACTGGCAATCCTGCAGAGC GAAGAGATGCTTTACGCCATCATGACGCTTTCCGGCGCGGCCTGGGTTAGCGTGCTCTGGTCACTGCAGGTTACCGCACA AACCTCTGTTCCTGCCTGGGTTCGGGGACGCGCACTGTCTCTCTATATCATGGTCTTCTCCGCAGGCCTGGCATTGGGAA GCCTGTTCTGGGGATGGGTTGCTGCCAGCACTACCGTTCCCACTGCCCTCCTGCTATCCTCGGCCGGGACGATGGTGGCG GCGCTGGCTGTTCGCAATTTCAGTCTGGGCTCCCGGGAGGCTCCGGATCTTGCTCCTTCATACCATTGGCGGCCGCATCC TCCAGCAATGGAAGAACCTGACTTGCGCCGGGGGCCCGTGCTAGTCACTGTCGAATATGAGATTGGGCTGGATCAGCGGC GAGCCTTCCTGGAAGCAATCCGCTCACTGGGAGCATCGCGGCGGCGCGATGGGGCGTTTGCCTGGGGGGTCTTTGAGGAC CTCGAGAAGCCGGGGCGTTATATCGAATTCTTCCAGCAGGCCTCGTGGCTGGATCATCTGCGCCAGCATGCACGCGTTAC CCGCGAGGACCAGCGAGTGCAGGAAAACGTCAACCGCTTTCATACGGGCAGCGAAGCCCCACGCGTTTCACACTTCATCG GTGGCACACCGACAGCGTCAACCGACAGCCCGGCGGCAACGGGAGGCATGACTGAAGCATAA
Upstream 100 bases:
>100_bases AAATCCGTGCTGCTATCGTCCATTTTCGAGCAGGAAGTGGATTAATTCAGGCAGGCGGTGGGAATGTGACTTTTCTTATG ACAAGCCTGGGTTTTCGCTG
Downstream 100 bases:
>100_bases AGAGGAAACTGACAGGCAAATTGCCGATAGTCACCCTTTTTTCCATCTCACTGAAAGGAGCATTTACATGATCGAACTAC GTCGCGCCCATGAGCGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MTKQARNKESNRGRSGTWEPLKILPFRAFWFAALGSNIGTWINGVSSAWVMTDLSPSPVMVSLVQAATSLPMVLFALAAG ALTDIVDRRRYLLFTQIWMAAAAAMLTVLAAIDQIDIWNLLILTFALGIGASLATPALNITAPELVPRSMLPEAVALSSL SMNLSRSLGPAIAGVLLAQIGPWAAYGLNALSFIGMIVVLWRWKREPEERSLPPERFFQALRAGVRYAHVASPFRAVLIR TTAFILFAASGWALLPLIARVELGGGPGTYGLLLSFVGIGAVCGILVLPRLHELASRDRLVLAASLIYGATIMALAILQS EEMLYAIMTLSGAAWVSVLWSLQVTAQTSVPAWVRGRALSLYIMVFSAGLALGSLFWGWVAASTTVPTALLLSSAGTMVA ALAVRNFSLGSREAPDLAPSYHWRPHPPAMEEPDLRRGPVLVTVEYEIGLDQRRAFLEAIRSLGASRRRDGAFAWGVFED LEKPGRYIEFFQQASWLDHLRQHARVTREDQRVQENVNRFHTGSEAPRVSHFIGGTPTASTDSPAATGGMTEA
Sequences:
>Translated_553_residues MTKQARNKESNRGRSGTWEPLKILPFRAFWFAALGSNIGTWINGVSSAWVMTDLSPSPVMVSLVQAATSLPMVLFALAAG ALTDIVDRRRYLLFTQIWMAAAAAMLTVLAAIDQIDIWNLLILTFALGIGASLATPALNITAPELVPRSMLPEAVALSSL SMNLSRSLGPAIAGVLLAQIGPWAAYGLNALSFIGMIVVLWRWKREPEERSLPPERFFQALRAGVRYAHVASPFRAVLIR TTAFILFAASGWALLPLIARVELGGGPGTYGLLLSFVGIGAVCGILVLPRLHELASRDRLVLAASLIYGATIMALAILQS EEMLYAIMTLSGAAWVSVLWSLQVTAQTSVPAWVRGRALSLYIMVFSAGLALGSLFWGWVAASTTVPTALLLSSAGTMVA ALAVRNFSLGSREAPDLAPSYHWRPHPPAMEEPDLRRGPVLVTVEYEIGLDQRRAFLEAIRSLGASRRRDGAFAWGVFED LEKPGRYIEFFQQASWLDHLRQHARVTREDQRVQENVNRFHTGSEAPRVSHFIGGTPTASTDSPAATGGMTEA >Mature_552_residues TKQARNKESNRGRSGTWEPLKILPFRAFWFAALGSNIGTWINGVSSAWVMTDLSPSPVMVSLVQAATSLPMVLFALAAGA LTDIVDRRRYLLFTQIWMAAAAAMLTVLAAIDQIDIWNLLILTFALGIGASLATPALNITAPELVPRSMLPEAVALSSLS MNLSRSLGPAIAGVLLAQIGPWAAYGLNALSFIGMIVVLWRWKREPEERSLPPERFFQALRAGVRYAHVASPFRAVLIRT TAFILFAASGWALLPLIARVELGGGPGTYGLLLSFVGIGAVCGILVLPRLHELASRDRLVLAASLIYGATIMALAILQSE EMLYAIMTLSGAAWVSVLWSLQVTAQTSVPAWVRGRALSLYIMVFSAGLALGSLFWGWVAASTTVPTALLLSSAGTMVAA LAVRNFSLGSREAPDLAPSYHWRPHPPAMEEPDLRRGPVLVTVEYEIGLDQRRAFLEAIRSLGASRRRDGAFAWGVFEDL EKPGRYIEFFQQASWLDHLRQHARVTREDQRVQENVNRFHTGSEAPRVSHFIGGTPTASTDSPAATGGMTEA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 59971; Mature: 59840
Theoretical pI: Translated: 9.98; Mature: 9.98
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQARNKESNRGRSGTWEPLKILPFRAFWFAALGSNIGTWINGVSSAWVMTDLSPSPVM CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCHHH VSLVQAATSLPMVLFALAAGALTDIVDRRRYLLFTQIWMAAAAAMLTVLAAIDQIDIWNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILTFALGIGASLATPALNITAPELVPRSMLPEAVALSSLSMNLSRSLGPAIAGVLLAQI HHHHHHHHCCCHHCCCCCCCCCHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPWAAYGLNALSFIGMIVVLWRWKREPEERSLPPERFFQALRAGVRYAHVASPFRAVLIR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH TTAFILFAASGWALLPLIARVELGGGPGTYGLLLSFVGIGAVCGILVLPRLHELASRDRL HHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VLAASLIYGATIMALAILQSEEMLYAIMTLSGAAWVSVLWSLQVTAQTSVPAWVRGRALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECCCCCHHHCCHHHH LYIMVFSAGLALGSLFWGWVAASTTVPTALLLSSAGTMVAALAVRNFSLGSREAPDLAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC YHWRPHPPAMEEPDLRRGPVLVTVEYEIGLDQRRAFLEAIRSLGASRRRDGAFAWGVFED CCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH LEKPGRYIEFFQQASWLDHLRQHARVTREDQRVQENVNRFHTGSEAPRVSHFIGGTPTAS HHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC TDSPAATGGMTEA CCCCCCCCCCCCC >Mature Secondary Structure TKQARNKESNRGRSGTWEPLKILPFRAFWFAALGSNIGTWINGVSSAWVMTDLSPSPVM CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEECCCCCHHH VSLVQAATSLPMVLFALAAGALTDIVDRRRYLLFTQIWMAAAAAMLTVLAAIDQIDIWNL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LILTFALGIGASLATPALNITAPELVPRSMLPEAVALSSLSMNLSRSLGPAIAGVLLAQI HHHHHHHHCCCHHCCCCCCCCCHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GPWAAYGLNALSFIGMIVVLWRWKREPEERSLPPERFFQALRAGVRYAHVASPFRAVLIR CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHH TTAFILFAASGWALLPLIARVELGGGPGTYGLLLSFVGIGAVCGILVLPRLHELASRDRL HHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH VLAASLIYGATIMALAILQSEEMLYAIMTLSGAAWVSVLWSLQVTAQTSVPAWVRGRALS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEEEECCCCCHHHCCHHHH LYIMVFSAGLALGSLFWGWVAASTTVPTALLLSSAGTMVAALAVRNFSLGSREAPDLAPS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCC YHWRPHPPAMEEPDLRRGPVLVTVEYEIGLDQRRAFLEAIRSLGASRRRDGAFAWGVFED CCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEHHHHHH LEKPGRYIEFFQQASWLDHLRQHARVTREDQRVQENVNRFHTGSEAPRVSHFIGGTPTAS HHCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCHHHHCCCCCCCC TDSPAATGGMTEA CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8946165; 9384377 [H]