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The map label for this gene is ytfM [C]

Identifier: 82702920

GI number: 82702920

Start: 2052858

End: 2054714

Strand: Reverse

Name: ytfM [C]

Synonym: Nmul_A1797

Alternate gene names: 82702920

Gene position: 2054714-2052858 (Counterclockwise)

Preceding gene: 82702923

Following gene: 82702919

Centisome position: 64.53

GC content: 56.17

Gene sequence:

>1857_bases
ATGCAAAGCCTGCCTTTCATTCGCGGGCTTCCAGTATTGTTTATACAGCCCTTCTTGCATTTGCCCGTCTTGAAATTCTT
GTTTTCTCTTCTGGCGGATAAAGCGTGTCTTTATCTCGGGGTGATCATTTTGCTCATGCTGAGTAACGACACGGTCGAAG
CGGGTCTCTTCGGCGGCCTCTTCGGAGACGATGCTCCTCCCCCCTCCATCAGCCTTTCCGCTCCGGAGCCCGTGGCGGAT
CTGCTGAAAACACATTTCCGTCTGCCGACAGAAGCTCTGGAAGATGAAACTGCGCGCGCTACTTTCATGCGGCGCGCCCA
GCGCGAAATTAGCGAACTGCTCGCCACCGAGGGTTATTTCATGCCCAGGATAACATTGCATCTCTCCACCCCCGGCGAGG
TACCGCAACTGGAAGTCGCGCCGGGACCGCGGACAATGGTTGTCGGGGTGCATATCGAGTTCAAGGGAGACCTGAGTGTT
GATGAGCCTGGACGGCGCGCACGGATTGAAAAGCTGCGCTCTGCCTGGTCCCTCAAGGAAGGCCAGCCCTTTCGCTCCCC
TGCCTGGGAAGAGGCCAAATCGGTATTGCTATCCAATGTCGCGGGAGAGGATTATGTCGCAGCGCAGATCGAGGAAAGCA
GGGCGGAGATAGATCCCGATTCTTCGCAGGCGCGGTTGAGGGTGATAGTGAACTCCGGGCCGGCATTCCACTTTGGCGAG
CTCGACATAAAAGGGCTCAATCGCTACGAACCCTCACTCATAAGCGGCCTTGCGCCATTTAAACCGGGGGACCTTTATCG
CCGTGATCAATTACTCTCGTTCCAGACGAAATTGCAGAATCTGCCTCAATTCAGTTCTGCGGCTGTCAATATTCAACCTG
ACGAAGTAACGCATCAGGCGGCGCCGGTAGAGGTAGTGCTATCGGAGGCGAAGTCGAAGAGGGTAGGGTTCGGCGCAGGG
TACAGTTCCAATACGGGTGCGCGTGGCGAGGTCACTTACATGAATAACGATTTCCTGAATAACGCCTTGAGACTGAACAG
TGGATTGCGTATCGAGCAGAAACGCCAGAGCTTGACGGGCTCAATCGACAGCGTGGCGGATGCCTCGGGAACATGGTTTT
CCTTGGGGGCGGCAGCGGATAGAACCTTTATCCAGCAACTGGAAACCATACGCCAGAAAGTCGGCGTCAGTCGCAACCAG
CTCTTGGACAAGACCGAAACAAGACTATCATTGAACTGGCAGCGGGAAAACCGGGATCCAAAAGGGGGCCTGGAGCAGAT
CAACCAGACCTTGGTGCTGGACGGTTATCTACGCTATCGTTCCGTGGACAACCCGTTATTCCCCAGGGATGGCAGCGTTT
CCGAATTGCGCATCGGTGGCGGCAAGCGGGAACTGTTGTCCGATCAGGACTTCTTGCGGACTTATGCCAGGCATCAGTTC
TGGTATCCGGTGGGCAAGCGCGACGTGCTATTTCTGAGGGGCGAGCTGGGGTACACCTTTGCTCCCTCGCGCTTCGGCAT
TCCCCAGGAATATCTCTTTAGAGCGGGCGGTATTCAATCCGTTCGCGGATACGCTTTTCAGCGTTTAGGCGTGAGGGAAG
GCAGCGCGGTGGTCGGGGGCAGGGTAATGTTCACGGGTTCAATTGAATATAATCACTGGCTTACACGTAATTGGGGTGCT
GCCATCTTTACCGATGTGGGGGATGCGGCCGATACCATAGGCGGGTTGAACCCGGCTGTCGGATACGGGGGAGGGATACG
CTGGCGCAGTCCTGTAGGGCCATTGGCGGTGGATGTCGCCCGCGGGCAGCGGGACGGGAAATTCCGTTTTCATTTTTCGA
TTGCCGTGGCGTTCTGA

Upstream 100 bases:

>100_bases
CGCTTTACTCAGGAAAATCGCTTATATCGCCGGTCTGCTATTCTTTGATCCTGGCGGTCCGCCTGCGGGGGCAAAGATTT
GCCTTGTTCCGCGGCTTTAC

Downstream 100 bases:

>100_bases
CAGCGCATGAAGGCTGTAAACGAACAGCGAATCCAACATGCTTTCCCAAGCTTCCGCTGGTGGCAATGGATGCTGCTGGC
GGCGATCTTCATCCTCCTCG

Product: surface antigen (D15)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 618; Mature: 618

Protein sequence:

>618_residues
MQSLPFIRGLPVLFIQPFLHLPVLKFLFSLLADKACLYLGVIILLMLSNDTVEAGLFGGLFGDDAPPPSISLSAPEPVAD
LLKTHFRLPTEALEDETARATFMRRAQREISELLATEGYFMPRITLHLSTPGEVPQLEVAPGPRTMVVGVHIEFKGDLSV
DEPGRRARIEKLRSAWSLKEGQPFRSPAWEEAKSVLLSNVAGEDYVAAQIEESRAEIDPDSSQARLRVIVNSGPAFHFGE
LDIKGLNRYEPSLISGLAPFKPGDLYRRDQLLSFQTKLQNLPQFSSAAVNIQPDEVTHQAAPVEVVLSEAKSKRVGFGAG
YSSNTGARGEVTYMNNDFLNNALRLNSGLRIEQKRQSLTGSIDSVADASGTWFSLGAAADRTFIQQLETIRQKVGVSRNQ
LLDKTETRLSLNWQRENRDPKGGLEQINQTLVLDGYLRYRSVDNPLFPRDGSVSELRIGGGKRELLSDQDFLRTYARHQF
WYPVGKRDVLFLRGELGYTFAPSRFGIPQEYLFRAGGIQSVRGYAFQRLGVREGSAVVGGRVMFTGSIEYNHWLTRNWGA
AIFTDVGDAADTIGGLNPAVGYGGGIRWRSPVGPLAVDVARGQRDGKFRFHFSIAVAF

Sequences:

>Translated_618_residues
MQSLPFIRGLPVLFIQPFLHLPVLKFLFSLLADKACLYLGVIILLMLSNDTVEAGLFGGLFGDDAPPPSISLSAPEPVAD
LLKTHFRLPTEALEDETARATFMRRAQREISELLATEGYFMPRITLHLSTPGEVPQLEVAPGPRTMVVGVHIEFKGDLSV
DEPGRRARIEKLRSAWSLKEGQPFRSPAWEEAKSVLLSNVAGEDYVAAQIEESRAEIDPDSSQARLRVIVNSGPAFHFGE
LDIKGLNRYEPSLISGLAPFKPGDLYRRDQLLSFQTKLQNLPQFSSAAVNIQPDEVTHQAAPVEVVLSEAKSKRVGFGAG
YSSNTGARGEVTYMNNDFLNNALRLNSGLRIEQKRQSLTGSIDSVADASGTWFSLGAAADRTFIQQLETIRQKVGVSRNQ
LLDKTETRLSLNWQRENRDPKGGLEQINQTLVLDGYLRYRSVDNPLFPRDGSVSELRIGGGKRELLSDQDFLRTYARHQF
WYPVGKRDVLFLRGELGYTFAPSRFGIPQEYLFRAGGIQSVRGYAFQRLGVREGSAVVGGRVMFTGSIEYNHWLTRNWGA
AIFTDVGDAADTIGGLNPAVGYGGGIRWRSPVGPLAVDVARGQRDGKFRFHFSIAVAF
>Mature_618_residues
MQSLPFIRGLPVLFIQPFLHLPVLKFLFSLLADKACLYLGVIILLMLSNDTVEAGLFGGLFGDDAPPPSISLSAPEPVAD
LLKTHFRLPTEALEDETARATFMRRAQREISELLATEGYFMPRITLHLSTPGEVPQLEVAPGPRTMVVGVHIEFKGDLSV
DEPGRRARIEKLRSAWSLKEGQPFRSPAWEEAKSVLLSNVAGEDYVAAQIEESRAEIDPDSSQARLRVIVNSGPAFHFGE
LDIKGLNRYEPSLISGLAPFKPGDLYRRDQLLSFQTKLQNLPQFSSAAVNIQPDEVTHQAAPVEVVLSEAKSKRVGFGAG
YSSNTGARGEVTYMNNDFLNNALRLNSGLRIEQKRQSLTGSIDSVADASGTWFSLGAAADRTFIQQLETIRQKVGVSRNQ
LLDKTETRLSLNWQRENRDPKGGLEQINQTLVLDGYLRYRSVDNPLFPRDGSVSELRIGGGKRELLSDQDFLRTYARHQF
WYPVGKRDVLFLRGELGYTFAPSRFGIPQEYLFRAGGIQSVRGYAFQRLGVREGSAVVGGRVMFTGSIEYNHWLTRNWGA
AIFTDVGDAADTIGGLNPAVGYGGGIRWRSPVGPLAVDVARGQRDGKFRFHFSIAVAF

Specific function: Unknown

COG id: COG0729

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli ytfM [H]

Homologues:

Organism=Escherichia coli, GI1790666, Length=525, Percent_Identity=24.3809523809524, Blast_Score=118, Evalue=1e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184 [H]

Pfam domain/function: PF01103 Bac_surface_Ag [H]

EC number: NA

Molecular weight: Translated: 68377; Mature: 68377

Theoretical pI: Translated: 8.35; Mature: 8.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLPFIRGLPVLFIQPFLHLPVLKFLFSLLADKACLYLGVIILLMLSNDTVEAGLFGGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
FGDDAPPPSISLSAPEPVADLLKTHFRLPTEALEDETARATFMRRAQREISELLATEGYF
CCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
MPRITLHLSTPGEVPQLEVAPGPRTMVVGVHIEFKGDLSVDEPGRRARIEKLRSAWSLKE
EEEEEEEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
GQPFRSPAWEEAKSVLLSNVAGEDYVAAQIEESRAEIDPDSSQARLRVIVNSGPAFHFGE
CCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECC
LDIKGLNRYEPSLISGLAPFKPGDLYRRDQLLSFQTKLQNLPQFSSAAVNIQPDEVTHQA
EEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCC
APVEVVLSEAKSKRVGFGAGYSSNTGARGEVTYMNNDFLNNALRLNSGLRIEQKRQSLTG
CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHCC
SIDSVADASGTWFSLGAAADRTFIQQLETIRQKVGVSRNQLLDKTETRLSLNWQRENRDP
CHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEECCCCCCC
KGGLEQINQTLVLDGYLRYRSVDNPLFPRDGSVSELRIGGGKRELLSDQDFLRTYARHQF
CCHHHHHCCEEEEECHHHHCCCCCCCCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHCCE
WYPVGKRDVLFLRGELGYTFAPSRFGIPQEYLFRAGGIQSVRGYAFQRLGVREGSAVVGG
ECCCCCCEEEEEECCCCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECC
RVMFTGSIEYNHWLTRNWGAAIFTDVGDAADTIGGLNPAVGYGGGIRWRSPVGPLAVDVA
EEEEEEEEEECCEEECCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEEC
RGQRDGKFRFHFSIAVAF
CCCCCCEEEEEEEEEEEC
>Mature Secondary Structure
MQSLPFIRGLPVLFIQPFLHLPVLKFLFSLLADKACLYLGVIILLMLSNDTVEAGLFGGL
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCC
FGDDAPPPSISLSAPEPVADLLKTHFRLPTEALEDETARATFMRRAQREISELLATEGYF
CCCCCCCCCEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE
MPRITLHLSTPGEVPQLEVAPGPRTMVVGVHIEFKGDLSVDEPGRRARIEKLRSAWSLKE
EEEEEEEECCCCCCCEEEECCCCCEEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHCCCC
GQPFRSPAWEEAKSVLLSNVAGEDYVAAQIEESRAEIDPDSSQARLRVIVNSGPAFHFGE
CCCCCCCCHHHHHHHHHHHCCCCCCEEHHHHHHHHCCCCCCCCCEEEEEEECCCCEEECC
LDIKGLNRYEPSLISGLAPFKPGDLYRRDQLLSFQTKLQNLPQFSSAAVNIQPDEVTHQA
EEECCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHCCC
APVEVVLSEAKSKRVGFGAGYSSNTGARGEVTYMNNDFLNNALRLNSGLRIEQKRQSLTG
CCHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHCCCCCCCHHHHHHHCC
SIDSVADASGTWFSLGAAADRTFIQQLETIRQKVGVSRNQLLDKTETRLSLNWQRENRDP
CHHHHCCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEEEEECCCCCCC
KGGLEQINQTLVLDGYLRYRSVDNPLFPRDGSVSELRIGGGKRELLSDQDFLRTYARHQF
CCHHHHHCCEEEEECHHHHCCCCCCCCCCCCCCCEEEECCCHHHHCCCHHHHHHHHHCCE
WYPVGKRDVLFLRGELGYTFAPSRFGIPQEYLFRAGGIQSVRGYAFQRLGVREGSAVVGG
ECCCCCCEEEEEECCCCCEECCCCCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCEEECC
RVMFTGSIEYNHWLTRNWGAAIFTDVGDAADTIGGLNPAVGYGGGIRWRSPVGPLAVDVA
EEEEEEEEEECCEEECCCCCEEEECCCHHHHHHCCCCCCCCCCCCCEECCCCCCEEEEEC
RGQRDGKFRFHFSIAVAF
CCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]