| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is rimK [C]
Identifier: 82702846
GI number: 82702846
Start: 1965494
End: 1966993
Strand: Direct
Name: rimK [C]
Synonym: Nmul_A1722
Alternate gene names: 82702846
Gene position: 1965494-1966993 (Clockwise)
Preceding gene: 82702845
Following gene: 82702861
Centisome position: 61.73
GC content: 53.4
Gene sequence:
>1500_bases GTGAATATCTTAATTATCGTAGACAAATCCGGGGATTGGCCTCTTCAAATTCCAGGCGTGACCGTGGTTGAGGCCCGAGC CTACCTGACCGATCCATCTTTTGCCGTTCAGGCGGAAAACAATCGCGGCACGAGTGCTACAGGGCAGTCTCTCAAGGTTT TCAACCTTTGTAAATCGTACCGCTATCAAGGATCGGGATATTACGTTTCATTGCTTGCCGAGGCCCGAGGACATAAACCG GTACCCAAAGTAGGTGCTATTGAGGATTTGCATTCCCGGAATTTGGTGCGCCACTTCATGGAGGAACTGGAGGATCTTGT TCAGAGTGTGCTGGCGCCCTTGCCGGGAGACGACTTCCAGCTTGCCTTCTATTTTGGCCGCACTCCGCTTACCGGTTATG ATTCCCTGGGTCATCAGTTCTTCAACCTGTTGCAGGTGCCACTCCTGGCCGTCCGCTTCGAACGCCACCGCCACCGGTGG AGCTTGCGCAGCGCTCGGCCCCTGGGCGCCGGCGAGATTCCTGTCGAACACCGGGACTTCGCGATACTTGCTGCGACCAC TTATTTCAATGAGCGCATGCAGCACCGAAGAAAACCCCCTCCCCGCTATGATCTTGCCATTCTCTGCAATCCGGATGAAT CTGAGCCGCCCTCCAATGCAAAAGCCCTGCAAAAGTTCAGGAAAGCAGCGGAAAAACTGGACATGCACGTGGATTTCATA ACGCGGACGGATATCGGCCGGTTGTCGCATTTCGATGCCTTGTTCATTCGCGAAACCACCTTCGTCAATCACTACACCTA TCGTTTTTCGCGGCTTGCATCCGCGGAAAAATTGGCACTGATCGACGACCCCAACTCTATCCTCAAATGCAACAACAAGG TTTACCTGGCTGAACTTCTCGCCCTGCATAAAGTGCCGATACCGAAAACGCTGTTGATCCATCATGATAATGTCGGCCGG ATTATTCCTGAACTGGGTCTTCCGTGCGTACTGAAGCAACCCGATAGCTCATTTTCACGAGGAGTCGTGAAAGTGGAGAC CGAGAGCGAGCTGATTCCCAAAGTAACCGAACTGCTTGCAAAATCCGTGCTCGTCATTGCACAACAATGGCTGCCGACCG AGTTCGACTGGCGGGTAGGCATACTCGACCGGAAGGTGCTGTTTGTAGCTCAATACTTCTTTCCCCCGGGGCATTGGCAG ATTATCGAGCGAGACGCGCAGCGGCATAAACTAAGAGAGGGGGCTACATCGGCTGTTCCACTGGATGAAGCGCCGCAAGA GGTCATCAGTATCGCACTCGAATCAGCCAACCTCATCGGGGATGGGTTCTACGGAGTGGATATCAAGCAGACGAACGACT GCTGTTATGTAATGGAAGTCAACGATAACCCGAATGTGGATGCCGGCAACGAAGACGCAGTGCTCGGCGATGCGCTCTAC GAGGAAATCATGCGGGTTTTTTTGAGGCGGATTGAAGCCGGCATGCGCTCATCCCACTGA
Upstream 100 bases:
>100_bases CCCCAGTCCGGGCGATAACGCTGGAAGGAAGCTCGCTTCCACGAATTCAACGGCAACGAGCCAGCCAAAAAGGTTTTTCT GTGAATATCTTAATTTTTCT
Downstream 100 bases:
>100_bases TCTGCAATCAAGCATTTGGCAATGCCCTCTCTATCGGGCAGCCTAGCTGAATCCGTTAGGGGGTCTTGTAAACAGGAACT CTGACCAGCACCTGCGGCAC
Product: glutathione synthase/ribosomal protein S6 modification protein
Products: NA
Alternate protein names: Glutathione Synthase/Ribosomal; RimK Domain Protein ATP-Grasp; Glutathione Synthase; Ribosomal Protein-Related Protein; RimK-Like ATP-Grasp Domain Family; Alpha-L-Glutamate Ligase Family Protein; RimK-Like ATP-Grasp; 30S Ribosomal Protein-Related Protein; GCN5-Related N-Acetyltransferase; Ribosomal Protein; Fused RimK-Like Domain/ Domain-Containing Protein; RimK Domain-Containing Protein; 30S Ribosomal Protein; Ribosomal Protein-Like Protein; Rimk Domain Protein ATP-Grasp; Glutathione Synthase/Ribosomal Glutaminyl Transferase; Ribosomal -Glutamic Acid Ligase
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MNILIIVDKSGDWPLQIPGVTVVEARAYLTDPSFAVQAENNRGTSATGQSLKVFNLCKSYRYQGSGYYVSLLAEARGHKP VPKVGAIEDLHSRNLVRHFMEELEDLVQSVLAPLPGDDFQLAFYFGRTPLTGYDSLGHQFFNLLQVPLLAVRFERHRHRW SLRSARPLGAGEIPVEHRDFAILAATTYFNERMQHRRKPPPRYDLAILCNPDESEPPSNAKALQKFRKAAEKLDMHVDFI TRTDIGRLSHFDALFIRETTFVNHYTYRFSRLASAEKLALIDDPNSILKCNNKVYLAELLALHKVPIPKTLLIHHDNVGR IIPELGLPCVLKQPDSSFSRGVVKVETESELIPKVTELLAKSVLVIAQQWLPTEFDWRVGILDRKVLFVAQYFFPPGHWQ IIERDAQRHKLREGATSAVPLDEAPQEVISIALESANLIGDGFYGVDIKQTNDCCYVMEVNDNPNVDAGNEDAVLGDALY EEIMRVFLRRIEAGMRSSH
Sequences:
>Translated_499_residues MNILIIVDKSGDWPLQIPGVTVVEARAYLTDPSFAVQAENNRGTSATGQSLKVFNLCKSYRYQGSGYYVSLLAEARGHKP VPKVGAIEDLHSRNLVRHFMEELEDLVQSVLAPLPGDDFQLAFYFGRTPLTGYDSLGHQFFNLLQVPLLAVRFERHRHRW SLRSARPLGAGEIPVEHRDFAILAATTYFNERMQHRRKPPPRYDLAILCNPDESEPPSNAKALQKFRKAAEKLDMHVDFI TRTDIGRLSHFDALFIRETTFVNHYTYRFSRLASAEKLALIDDPNSILKCNNKVYLAELLALHKVPIPKTLLIHHDNVGR IIPELGLPCVLKQPDSSFSRGVVKVETESELIPKVTELLAKSVLVIAQQWLPTEFDWRVGILDRKVLFVAQYFFPPGHWQ IIERDAQRHKLREGATSAVPLDEAPQEVISIALESANLIGDGFYGVDIKQTNDCCYVMEVNDNPNVDAGNEDAVLGDALY EEIMRVFLRRIEAGMRSSH >Mature_499_residues MNILIIVDKSGDWPLQIPGVTVVEARAYLTDPSFAVQAENNRGTSATGQSLKVFNLCKSYRYQGSGYYVSLLAEARGHKP VPKVGAIEDLHSRNLVRHFMEELEDLVQSVLAPLPGDDFQLAFYFGRTPLTGYDSLGHQFFNLLQVPLLAVRFERHRHRW SLRSARPLGAGEIPVEHRDFAILAATTYFNERMQHRRKPPPRYDLAILCNPDESEPPSNAKALQKFRKAAEKLDMHVDFI TRTDIGRLSHFDALFIRETTFVNHYTYRFSRLASAEKLALIDDPNSILKCNNKVYLAELLALHKVPIPKTLLIHHDNVGR IIPELGLPCVLKQPDSSFSRGVVKVETESELIPKVTELLAKSVLVIAQQWLPTEFDWRVGILDRKVLFVAQYFFPPGHWQ IIERDAQRHKLREGATSAVPLDEAPQEVISIALESANLIGDGFYGVDIKQTNDCCYVMEVNDNPNVDAGNEDAVLGDALY EEIMRVFLRRIEAGMRSSH
Specific function: Responsible For The Addition Of Glutamate Residues To The C-Terminus Of Ribosomal Protein S6. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56478; Mature: 56478
Theoretical pI: Translated: 6.76; Mature: 6.76
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNILIIVDKSGDWPLQIPGVTVVEARAYLTDPSFAVQAENNRGTSATGQSLKVFNLCKSY CEEEEEEECCCCCCEEECCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHH RYQGSGYYVSLLAEARGHKPVPKVGAIEDLHSRNLVRHFMEELEDLVQSVLAPLPGDDFQ CCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LAFYFGRTPLTGYDSLGHQFFNLLQVPLLAVRFERHRHRWSLRSARPLGAGEIPVEHRDF EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE AILAATTYFNERMQHRRKPPPRYDLAILCNPDESEPPSNAKALQKFRKAAEKLDMHVDFI EEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEE TRTDIGRLSHFDALFIRETTFVNHYTYRFSRLASAEKLALIDDPNSILKCNNKVYLAELL ECCCCCHHHHCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHEEECCEEHHHHHH ALHKVPIPKTLLIHHDNVGRIIPELGLPCVLKQPDSSFSRGVVKVETESELIPKVTELLA HHHCCCCCCEEEEEECCHHHHHHHCCCCEEEECCCCHHHCCEEEEECCHHHHHHHHHHHH KSVLVIAQQWLPTEFDWRVGILDRKVLFVAQYFFPPGHWQIIERDAQRHKLREGATSAVP HHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHCCCCCCC LDEAPQEVISIALESANLIGDGFYGVDIKQTNDCCYVMEVNDNPNVDAGNEDAVLGDALY CCCCHHHHHHHHHHHCCEECCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHH EEIMRVFLRRIEAGMRSSH HHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNILIIVDKSGDWPLQIPGVTVVEARAYLTDPSFAVQAENNRGTSATGQSLKVFNLCKSY CEEEEEEECCCCCCEEECCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCHHHHHHHHHH RYQGSGYYVSLLAEARGHKPVPKVGAIEDLHSRNLVRHFMEELEDLVQSVLAPLPGDDFQ CCCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEE LAFYFGRTPLTGYDSLGHQFFNLLQVPLLAVRFERHRHRWSLRSARPLGAGEIPVEHRDF EEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCE AILAATTYFNERMQHRRKPPPRYDLAILCNPDESEPPSNAKALQKFRKAAEKLDMHVDFI EEEEEHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCEEEEE TRTDIGRLSHFDALFIRETTFVNHYTYRFSRLASAEKLALIDDPNSILKCNNKVYLAELL ECCCCCHHHHCCEEEEEEEHHHHHHHHHHHHHCCCCCEEEEECCCHHEEECCEEHHHHHH ALHKVPIPKTLLIHHDNVGRIIPELGLPCVLKQPDSSFSRGVVKVETESELIPKVTELLA HHHCCCCCCEEEEEECCHHHHHHHCCCCEEEECCCCHHHCCEEEEECCHHHHHHHHHHHH KSVLVIAQQWLPTEFDWRVGILDRKVLFVAQYFFPPGHWQIIERDAQRHKLREGATSAVP HHHHHHHHHHCCCCCCEEEEEECHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHCCCCCCC LDEAPQEVISIALESANLIGDGFYGVDIKQTNDCCYVMEVNDNPNVDAGNEDAVLGDALY CCCCHHHHHHHHHHHCCEECCCEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHHHHH EEIMRVFLRRIEAGMRSSH HHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Glu; Ribosomal protein S6 [C]
Specific reaction: Catalyzes the addition of glutamic acids to the carboxyl end of ribosomal protein S6 [C]
General reaction: Ligases; Forming Carbon-Nitrogen Bonds; Acid-D-Amino-Acid Ligases [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA