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The map label for this gene is ypfJ [H]

Identifier: 82702834

GI number: 82702834

Start: 1953575

End: 1954447

Strand: Direct

Name: ypfJ [H]

Synonym: Nmul_A1710

Alternate gene names: 82702834

Gene position: 1953575-1954447 (Clockwise)

Preceding gene: 82702833

Following gene: 82702835

Centisome position: 61.35

GC content: 58.19

Gene sequence:

>873_bases
ATGAAATGGGAAGGTTATCGCCAAAGTAGTAACGTCGAGGATCGCCGAGGTTCGGGCAGCGCATTTGGACTGGGTGGCGG
CAGAATCAGCGCCGGCGCGATTGTCATAGCGTTGATCGGTGGGTTGTTGTTCGGCATCGATCCTCTCACCATGCTCAGCG
TGATCACCGGCGGAGGCAGCGGAGGCAACATGGTTCAGGAACAAGGTTCTGCACCCGCTGCGCCCCCGGGGGACATGCAG
GCAGCCTTCGTTTCGACAGTCCTCGCCGATACCGAGGATGTATGGACGGGCCTGATGAGGCAGGAAAACAAAACTTATGA
GCCGCCCAAGCTTGTGCTGTTTCGAGGTGCTGCTCTAACGGCGTGCGGGCAGGGAAGCGCGGCAATGGGTCCCTTCTACT
GTCCGGAGGACCAGCGCATCTATATCGATCTGGACTTCTTCAATACGATGGCAAACCAGCTTGGAGCAGGAGGCGACTTC
GCGCAGGCATACGTCATTTCGCACGAAGTCGGGCATCATGTACAGAATCTCCTTGGCATCTCCGGTCAGGTGAATGCCGC
GCGCGCTCGGTTGCCGCGCTCACAGGCGAATTCCTTGTCGGTACGTGTCGAATTGCAGGCGGACTGTCTGGCTGGGGTCT
GGGCCTACCATTCGCAGCGTTCCAAGGGATGGCTGGAGCAAGGCGATATCGAAGAAGCAATGAACGCGGCAACGCAGATC
GGCGATGATACATTGCAGCGCAGGACACGCGGCACGATCGTGCCGGAAAGCTTCACGCATGGCACGAGCGCCCAGCGTAC
CGGCTGGTTTAAGCGGGGATTGCAAGCGGGAAACATGACGGATTGCAATACTCTTAGATCGGAAAAGCTGTAA

Upstream 100 bases:

>100_bases
GCAGACCCCAGCACTCTTCGATGGAAATAGGCTGGAGGCAAGCTTCTGGAAGCCGCACAAGGGATTACACAAGAAGAACT
GATTGTACCTGGAGCCGAAA

Downstream 100 bases:

>100_bases
CCTTGCCTCAAGATTCACAGGGAGAACAATCATGAGAGTTTCCGAGCTTAAGGGCGAACTGCTCGACTACTGGGTGGCAA
AAGCCAACGATGTGGAAGAA

Product: zinc binding 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MKWEGYRQSSNVEDRRGSGSAFGLGGGRISAGAIVIALIGGLLFGIDPLTMLSVITGGGSGGNMVQEQGSAPAAPPGDMQ
AAFVSTVLADTEDVWTGLMRQENKTYEPPKLVLFRGAALTACGQGSAAMGPFYCPEDQRIYIDLDFFNTMANQLGAGGDF
AQAYVISHEVGHHVQNLLGISGQVNAARARLPRSQANSLSVRVELQADCLAGVWAYHSQRSKGWLEQGDIEEAMNAATQI
GDDTLQRRTRGTIVPESFTHGTSAQRTGWFKRGLQAGNMTDCNTLRSEKL

Sequences:

>Translated_290_residues
MKWEGYRQSSNVEDRRGSGSAFGLGGGRISAGAIVIALIGGLLFGIDPLTMLSVITGGGSGGNMVQEQGSAPAAPPGDMQ
AAFVSTVLADTEDVWTGLMRQENKTYEPPKLVLFRGAALTACGQGSAAMGPFYCPEDQRIYIDLDFFNTMANQLGAGGDF
AQAYVISHEVGHHVQNLLGISGQVNAARARLPRSQANSLSVRVELQADCLAGVWAYHSQRSKGWLEQGDIEEAMNAATQI
GDDTLQRRTRGTIVPESFTHGTSAQRTGWFKRGLQAGNMTDCNTLRSEKL
>Mature_290_residues
MKWEGYRQSSNVEDRRGSGSAFGLGGGRISAGAIVIALIGGLLFGIDPLTMLSVITGGGSGGNMVQEQGSAPAAPPGDMQ
AAFVSTVLADTEDVWTGLMRQENKTYEPPKLVLFRGAALTACGQGSAAMGPFYCPEDQRIYIDLDFFNTMANQLGAGGDF
AQAYVISHEVGHHVQNLLGISGQVNAARARLPRSQANSLSVRVELQADCLAGVWAYHSQRSKGWLEQGDIEEAMNAATQI
GDDTLQRRTRGTIVPESFTHGTSAQRTGWFKRGLQAGNMTDCNTLRSEKL

Specific function: Unknown

COG id: COG2321

COG function: function code R; Predicted metalloprotease

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788819, Length=292, Percent_Identity=48.2876712328767, Blast_Score=280, Evalue=6e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007343 [H]

Pfam domain/function: PF04228 Zn_peptidase [H]

EC number: NA

Molecular weight: Translated: 30944; Mature: 30944

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKWEGYRQSSNVEDRRGSGSAFGLGGGRISAGAIVIALIGGLLFGIDPLTMLSVITGGGS
CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GGNMVQEQGSAPAAPPGDMQAAFVSTVLADTEDVWTGLMRQENKTYEPPKLVLFRGAALT
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEECCCEEE
ACGQGSAAMGPFYCPEDQRIYIDLDFFNTMANQLGAGGDFAQAYVISHEVGHHVQNLLGI
ECCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
SGQVNAARARLPRSQANSLSVRVELQADCLAGVWAYHSQRSKGWLEQGDIEEAMNAATQI
CCCCCHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
GDDTLQRRTRGTIVPESFTHGTSAQRTGWFKRGLQAGNMTDCNTLRSEKL
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCC
>Mature Secondary Structure
MKWEGYRQSSNVEDRRGSGSAFGLGGGRISAGAIVIALIGGLLFGIDPLTMLSVITGGGS
CCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
GGNMVQEQGSAPAAPPGDMQAAFVSTVLADTEDVWTGLMRQENKTYEPPKLVLFRGAALT
CCCHHHHCCCCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEECCCEEE
ACGQGSAAMGPFYCPEDQRIYIDLDFFNTMANQLGAGGDFAQAYVISHEVGHHVQNLLGI
ECCCCCCCCCCEECCCCCEEEEEEHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC
SGQVNAARARLPRSQANSLSVRVELQADCLAGVWAYHSQRSKGWLEQGDIEEAMNAATQI
CCCCCHHHHHCCCCCCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHC
GDDTLQRRTRGTIVPESFTHGTSAQRTGWFKRGLQAGNMTDCNTLRSEKL
CHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]