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The map label for this gene is yhfW [H]

Identifier: 82702628

GI number: 82702628

Start: 1714199

End: 1715698

Strand: Direct

Name: yhfW [H]

Synonym: Nmul_A1499

Alternate gene names: 82702628

Gene position: 1714199-1715698 (Clockwise)

Preceding gene: 82702627

Following gene: 82702630

Centisome position: 53.83

GC content: 54.33

Gene sequence:

>1500_bases
ATGAACACAACTTCTGTCTGGCGCGCCACAGGGCCTTCCGCCGGCTTCCCGATGTTGCAGGAAGAACTTACTACGGATGT
CGTGATTGTGGGAGGCGGAATAACCGGCGTATCCCTGGCCTTGAACTTGGCTGAGCAAGGCATCGGAGCGGTATTGCTGG
AAGCACATGATTGTGATTTCGGCAGTACAGGAAATTCCACTGGCAACCTTTATGAAACTCTGAGCCGTGGTATTTATCCT
ATCGTCGAGCGATGGGACAAGGATGTTGCTCGTGCTGTCACCACTGCCCGACGCCAGGCAGTAGAGCAGATCGAGGAGCG
GGTGCGAAAATACAATATTACCTGTGGGTTCCGGCGTTGCCCATTACACCGCTATGCTACCTCAGCAGGGGGAAAGGAGA
GCGTGCAACAGGAATACGAAGGTTCGCTAATCGCGGGATTATCAGTGCGCCTGGAAGACAAGCTTCCGCATCCTTTTCCT
GCTCCACATGGACGGGTGTTGATTTTGGATAATCAGGCTCAGTTCCATCCGCAGGCTTATGTTCGCGAACTTGCGCAGCA
GGCAGCAAAACAGGGGTGCCGCATCTTCGAAAATTCCATGGTCCTGGAAGTGGATGCGGATGAGCGTGTCGTACGTACCG
CCAACGGTAAAGTAACTGCCAGGGAAATCGTGCTTGCGACTCACTCCCCCAAGGGTATTCACCTGGTGCAGACCGAAATG
GTGGTGAACCGGGAATACGGACTCGCCAGGCGCATCAGCAGGGATACATATCCCGCGGGAATCTTCTGGAGCAGCGGCCT
GGAGAGGCTTTCGGTTCGGACTCTGGATGTCGAGGATGCGACATATCTCATCTGTGTCGGCGAAGAGCATAAAACCGGAC
AGCAGGATACCAGGACGAGCATCGATCGGCTGGAAACGGCAGCAAGCGAATATCTTGGCATGAAGGAAATTGATTACCGC
TGGTCAGCCCAGAATTATAGCGCTGCAGATGGTCTGCCATACATTGGCCGTGATGCAACGGGTTGCTTCGTCGCAACCGG
ATTTGAAACCGATGGCCTGACCTATGGAACGCTTGCGGCCTCACTCATTGCTGACCAGATTGCGGGCCGCGACAACGTCT
TTGCCCCGCTTGTCAAGGCAAGCCGTTTTGAACCGGTAAAAGGCGTAAAGGGGATAGTCGAGGAAAACATCTCGGTAATG
AAGTCGTTCATCAAGGACTACATCACGGATCGGGAGGCAATACCGTTGTCCCAACTCACACCAGGAAAAGCTGCGATAGT
CAAATTCGAGAGCGAATCGCTTGCTGCTTACAGGGATGCCGAGGGTACATTATTTGCTGTTTCACCTGTATGCACCCATA
TGAAGTGCAGGGTACATTGGAATGCGGTGGAAAAAAGCTGGGATTGCCCCTGCCACGGAAGCCGCTTCGCGCCTGATGGC
GCAGTAATCGAGGGACCGGCCATCGAGCCGCTTCGAAGGCACGTTCTGCCGGGACACTGA

Upstream 100 bases:

>100_bases
AAAAGCCGCTGCCCATGCTCGAGGAATTCGGCACGGACCGGGTGATTCTTTGAACCGGCACTCCCGTAGCTTGAGAAAAC
TAAACAAAAAGGAATACGTG

Downstream 100 bases:

>100_bases
ACGAAACTAAGCGAAATCAGAAGAAACAAGCCGATTTCGTCCATCTGGCACGGAAAACTCTCCGCGCGTTCTCTCTGCTG
GTCTGGTTTGTTTTTATTCC

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MNTTSVWRATGPSAGFPMLQEELTTDVVIVGGGITGVSLALNLAEQGIGAVLLEAHDCDFGSTGNSTGNLYETLSRGIYP
IVERWDKDVARAVTTARRQAVEQIEERVRKYNITCGFRRCPLHRYATSAGGKESVQQEYEGSLIAGLSVRLEDKLPHPFP
APHGRVLILDNQAQFHPQAYVRELAQQAAKQGCRIFENSMVLEVDADERVVRTANGKVTAREIVLATHSPKGIHLVQTEM
VVNREYGLARRISRDTYPAGIFWSSGLERLSVRTLDVEDATYLICVGEEHKTGQQDTRTSIDRLETAASEYLGMKEIDYR
WSAQNYSAADGLPYIGRDATGCFVATGFETDGLTYGTLAASLIADQIAGRDNVFAPLVKASRFEPVKGVKGIVEENISVM
KSFIKDYITDREAIPLSQLTPGKAAIVKFESESLAAYRDAEGTLFAVSPVCTHMKCRVHWNAVEKSWDCPCHGSRFAPDG
AVIEGPAIEPLRRHVLPGH

Sequences:

>Translated_499_residues
MNTTSVWRATGPSAGFPMLQEELTTDVVIVGGGITGVSLALNLAEQGIGAVLLEAHDCDFGSTGNSTGNLYETLSRGIYP
IVERWDKDVARAVTTARRQAVEQIEERVRKYNITCGFRRCPLHRYATSAGGKESVQQEYEGSLIAGLSVRLEDKLPHPFP
APHGRVLILDNQAQFHPQAYVRELAQQAAKQGCRIFENSMVLEVDADERVVRTANGKVTAREIVLATHSPKGIHLVQTEM
VVNREYGLARRISRDTYPAGIFWSSGLERLSVRTLDVEDATYLICVGEEHKTGQQDTRTSIDRLETAASEYLGMKEIDYR
WSAQNYSAADGLPYIGRDATGCFVATGFETDGLTYGTLAASLIADQIAGRDNVFAPLVKASRFEPVKGVKGIVEENISVM
KSFIKDYITDREAIPLSQLTPGKAAIVKFESESLAAYRDAEGTLFAVSPVCTHMKCRVHWNAVEKSWDCPCHGSRFAPDG
AVIEGPAIEPLRRHVLPGH
>Mature_499_residues
MNTTSVWRATGPSAGFPMLQEELTTDVVIVGGGITGVSLALNLAEQGIGAVLLEAHDCDFGSTGNSTGNLYETLSRGIYP
IVERWDKDVARAVTTARRQAVEQIEERVRKYNITCGFRRCPLHRYATSAGGKESVQQEYEGSLIAGLSVRLEDKLPHPFP
APHGRVLILDNQAQFHPQAYVRELAQQAAKQGCRIFENSMVLEVDADERVVRTANGKVTAREIVLATHSPKGIHLVQTEM
VVNREYGLARRISRDTYPAGIFWSSGLERLSVRTLDVEDATYLICVGEEHKTGQQDTRTSIDRLETAASEYLGMKEIDYR
WSAQNYSAADGLPYIGRDATGCFVATGFETDGLTYGTLAASLIADQIAGRDNVFAPLVKASRFEPVKGVKGIVEENISVM
KSFIKDYITDREAIPLSQLTPGKAAIVKFESESLAAYRDAEGTLFAVSPVCTHMKCRVHWNAVEKSWDCPCHGSRFAPDG
AVIEGPAIEPLRRHVLPGH

Specific function: Unknown

COG id: COG0665

COG function: function code E; Glycine/D-amino acid oxidases (deaminating)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

Organism=Escherichia coli, GI1787559, Length=408, Percent_Identity=28.4313725490196, Blast_Score=110, Evalue=2e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076
- InterPro:   IPR017941
- InterPro:   IPR005805 [H]

Pfam domain/function: PF01266 DAO; PF00355 Rieske [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 54759; Mature: 54759

Theoretical pI: Translated: 6.20; Mature: 6.20

Prosite motif: PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTSVWRATGPSAGFPMLQEELTTDVVIVGGGITGVSLALNLAEQGIGAVLLEAHDCDF
CCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCC
GSTGNSTGNLYETLSRGIYPIVERWDKDVARAVTTARRQAVEQIEERVRKYNITCGFRRC
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
PLHRYATSAGGKESVQQEYEGSLIAGLSVRLEDKLPHPFPAPHGRVLILDNQAQFHPQAY
CCHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHH
VRELAQQAAKQGCRIFENSMVLEVDADERVVRTANGKVTAREIVLATHSPKGIHLVQTEM
HHHHHHHHHHCCCEEECCCEEEEECCCCCEEEECCCCEEEEEEEEEECCCCCEEEEEEEE
VVNREYGLARRISRDTYPAGIFWSSGLERLSVRTLDVEDATYLICVGEEHKTGQQDTRTS
ECCCCCCHHHHHCCCCCCCCEEHHCCCCEEEEEEEEECCCEEEEEECCCCCCCCHHHHHH
IDRLETAASEYLGMKEIDYRWSAQNYSAADGLPYIGRDATGCFVATGFETDGLTYGTLAA
HHHHHHHHHHHCCCHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHH
SLIADQIAGRDNVFAPLVKASRFEPVKGVKGIVEENISVMKSFIKDYITDREAIPLSQLT
HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PGKAAIVKFESESLAAYRDAEGTLFAVSPVCTHMKCRVHWNAVEKSWDCPCHGSRFAPDG
CCCEEEEEECCCCHHHEECCCCCEEEECHHCCCEEEEEEEEHHCCCCCCCCCCCCCCCCC
AVIEGPAIEPLRRHVLPGH
CEEECCCHHHHHHHCCCCC
>Mature Secondary Structure
MNTTSVWRATGPSAGFPMLQEELTTDVVIVGGGITGVSLALNLAEQGIGAVLLEAHDCDF
CCCCCEEEECCCCCCCCHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEEECCCC
GSTGNSTGNLYETLSRGIYPIVERWDKDVARAVTTARRQAVEQIEERVRKYNITCGFRRC
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCC
PLHRYATSAGGKESVQQEYEGSLIAGLSVRLEDKLPHPFPAPHGRVLILDNQAQFHPQAY
CCHHHHHCCCCHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCHHHH
VRELAQQAAKQGCRIFENSMVLEVDADERVVRTANGKVTAREIVLATHSPKGIHLVQTEM
HHHHHHHHHHCCCEEECCCEEEEECCCCCEEEECCCCEEEEEEEEEECCCCCEEEEEEEE
VVNREYGLARRISRDTYPAGIFWSSGLERLSVRTLDVEDATYLICVGEEHKTGQQDTRTS
ECCCCCCHHHHHCCCCCCCCEEHHCCCCEEEEEEEEECCCEEEEEECCCCCCCCHHHHHH
IDRLETAASEYLGMKEIDYRWSAQNYSAADGLPYIGRDATGCFVATGFETDGLTYGTLAA
HHHHHHHHHHHCCCHHCCCEECCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEHHHHHH
SLIADQIAGRDNVFAPLVKASRFEPVKGVKGIVEENISVMKSFIKDYITDREAIPLSQLT
HHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHCC
PGKAAIVKFESESLAAYRDAEGTLFAVSPVCTHMKCRVHWNAVEKSWDCPCHGSRFAPDG
CCCEEEEEECCCCHHHEECCCCCEEEECHHCCCEEEEEEEEHHCCCCCCCCCCCCCCCCC
AVIEGPAIEPLRRHVLPGH
CEEECCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]