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The map label for this gene is yoaA [H]

Identifier: 82702541

GI number: 82702541

Start: 1620732

End: 1622708

Strand: Direct

Name: yoaA [H]

Synonym: Nmul_A1412

Alternate gene names: 82702541

Gene position: 1620732-1622708 (Clockwise)

Preceding gene: 82702540

Following gene: 82702542

Centisome position: 50.9

GC content: 54.53

Gene sequence:

>1977_bases
ATGACACCTTCCATGCTCGATATCAATTCCCTTTTCTCTGCTGGGGGCGCTTTAGCCCGGAGTGTGCCAGGTTATATAGT
GCGTACGCAGCAGAGGGAAATGGCTCAGGCAATTGCTGATACCATTGCCTCCAGCACGATCCTGATTGCAGAGGCCGGAA
CGGGCACGGGCAAAACCTTCGCCTATCTGGTGCCCGCCTTGATGACAGGGGGAAAGGTGATTATTTCCACGGGGACAAAG
ACTCTGCAAGATCAGTTGTTCAACCGTGACATTCCAACCGTTCAGAGCGCGCTCAAAATTCCAGTTACCGTGGCCTTGTT
GAAGGGACGGGCAAATTACGTTTGTCACTATCATCTCGAGCTTACCTTCCAGGAAAGCCGACCGGCCCTCGTCAGCCGAG
AAGAGGTGAAGTATCTGAACTTGATTGAACGTTATGCCAAGAACAGCAAGAGCGGGGACAAGAGCGGCTTGAGTGAAGTA
CCTGAAAATGCCTCAGTCTGGCAGTACGTCACTTCCACCCGCGATAATTGCCTGGGTTCGAACTGTCCGCACTACAAGGA
TTGTTTTGTCATCGAAGCACGCAAGCAGGCCCTGTCAGCCGATGTGGTGGTGGTAAACCATCATCTATTCTTTGCCGACG
TCATGCTGCGTGATGAAGGACTGTCGGAGTTGCTCCCCACCTGCAATACAGTGATATTTGACGAGGCTCACCAGTTACCG
GAAACAGCCAGCCTCTTCTTTGGGGAATCCGTCAGCACCGGTCAATTGCTGGAGTTGGCCCGGGACAGCGAGGCTGAAGC
ACTGGGGAATGCAAAAGATTTTGCTCCCCTCCCCCCTGCTATCGCGGCAATGGAAAAGGCCGCGCGCGATTTGCGCTTGA
CTGTGGAAGGGGAGAACATGCGCATGCCGGTGACTGCAATCAAGGCTAACGCAAAATTTGCCGGCGCGCTGAGCGAATTG
CAGGAAAGACTGGATAGCCTGATCGATCTGCTCGAAAGCCAAGCTGAGCGCTCGGATGGTCTGGAAAATTGCTGGCAGCG
TTCTCGGGAAATCGCCGGCCGTATAAAACGCTGGCAAGAACAGGCTGAAGCCGAAGGCTTCGTGCGGTGGGTGGAAGTAT
TCAGCCAGGCATTGCAACTCAATGCCACCCCGCTTTCCATTGCGGGGATATTCAACAAACAATTGGGCGGCCCTCCACGC
GCCTGGATATTTACGTCCGCAACACTTTCAGTCAAGGGCGACTTCTCTCATTATAACGATCAGATGGGGCTGAATACGGG
AACCATCCCTTCGCATTCCATGTGCTGGGAAAGTCCCTTTGATTTTGCCCATCAGGCTTTGCTCTATGTTCCAGCAGGCA
TTCCGGAACCGAACAGCAGCAGATATACGGAAGACGTGGTGAAGGCAGCGCTGCCGGTATTGAAGGCCAGCCGGGGGCGG
GCATTTTTCCTGTGCACCAGCCTGCGCGCGATGCAAAAGACATATGAATTGCTGCTGGAGGCATTCAAGCGGGAAAGACT
CGACTACCCTCTGCTGCTGCAAGGCCAAGGTGCGCGCTCCCACATGCTGGAGCGTTTCCGGAAGATGGGCAATGCAATTC
TGATCGGCAGCCAATCCTTCTGGGAGGGCGTGGATGTGCGTGGAGAAGCATTATCCCTGGTGGTGATCGACAAACTTCCT
TTCGCTCCTCCCGATGACCCGGTGCTTGCCGCACGTATCGACAAAATCAACAAGGAGGGCCGTAATGCCTTCATGGAGTA
TCAATTGCCGCACGCTGTGATCAATCTGAAACAAGGAGCTGGCAGGTTGATCCGGGATGAAACCGACCGGGGGGTACTGA
TGATCTGCGATCCGCGCCTGATCAGCAGGCCCTATGGCAGAAAAATCTGGCAGAGCCTGCCCCCCATGAAGCGCACACGC
AATCTGGCTGAAGTGGAAGCGTTTTTTTCGGCAAATTCCACCTTGACCCAGGCGTGA

Upstream 100 bases:

>100_bases
TAACTCGCATAAATCGCTCCAGTTATAGCCCCCCTTCCCTTGCAATACCTATAGCCAGGATGCCTTATTCCTGACACTGG
GATATCATAGTGTAAGGTTG

Downstream 100 bases:

>100_bases
AGCACATTTTGCCCGCGCTCCTGGCGGGGTGTATTTTCATGCAGGATGTGCGCGGCGAAAACAACGATGCGTCCGAGAGC
TCCCAAAGCCACAGACCCGA

Product: helicase c2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 657

Protein sequence:

>658_residues
MTPSMLDINSLFSAGGALARSVPGYIVRTQQREMAQAIADTIASSTILIAEAGTGTGKTFAYLVPALMTGGKVIISTGTK
TLQDQLFNRDIPTVQSALKIPVTVALLKGRANYVCHYHLELTFQESRPALVSREEVKYLNLIERYAKNSKSGDKSGLSEV
PENASVWQYVTSTRDNCLGSNCPHYKDCFVIEARKQALSADVVVVNHHLFFADVMLRDEGLSELLPTCNTVIFDEAHQLP
ETASLFFGESVSTGQLLELARDSEAEALGNAKDFAPLPPAIAAMEKAARDLRLTVEGENMRMPVTAIKANAKFAGALSEL
QERLDSLIDLLESQAERSDGLENCWQRSREIAGRIKRWQEQAEAEGFVRWVEVFSQALQLNATPLSIAGIFNKQLGGPPR
AWIFTSATLSVKGDFSHYNDQMGLNTGTIPSHSMCWESPFDFAHQALLYVPAGIPEPNSSRYTEDVVKAALPVLKASRGR
AFFLCTSLRAMQKTYELLLEAFKRERLDYPLLLQGQGARSHMLERFRKMGNAILIGSQSFWEGVDVRGEALSLVVIDKLP
FAPPDDPVLAARIDKINKEGRNAFMEYQLPHAVINLKQGAGRLIRDETDRGVLMICDPRLISRPYGRKIWQSLPPMKRTR
NLAEVEAFFSANSTLTQA

Sequences:

>Translated_658_residues
MTPSMLDINSLFSAGGALARSVPGYIVRTQQREMAQAIADTIASSTILIAEAGTGTGKTFAYLVPALMTGGKVIISTGTK
TLQDQLFNRDIPTVQSALKIPVTVALLKGRANYVCHYHLELTFQESRPALVSREEVKYLNLIERYAKNSKSGDKSGLSEV
PENASVWQYVTSTRDNCLGSNCPHYKDCFVIEARKQALSADVVVVNHHLFFADVMLRDEGLSELLPTCNTVIFDEAHQLP
ETASLFFGESVSTGQLLELARDSEAEALGNAKDFAPLPPAIAAMEKAARDLRLTVEGENMRMPVTAIKANAKFAGALSEL
QERLDSLIDLLESQAERSDGLENCWQRSREIAGRIKRWQEQAEAEGFVRWVEVFSQALQLNATPLSIAGIFNKQLGGPPR
AWIFTSATLSVKGDFSHYNDQMGLNTGTIPSHSMCWESPFDFAHQALLYVPAGIPEPNSSRYTEDVVKAALPVLKASRGR
AFFLCTSLRAMQKTYELLLEAFKRERLDYPLLLQGQGARSHMLERFRKMGNAILIGSQSFWEGVDVRGEALSLVVIDKLP
FAPPDDPVLAARIDKINKEGRNAFMEYQLPHAVINLKQGAGRLIRDETDRGVLMICDPRLISRPYGRKIWQSLPPMKRTR
NLAEVEAFFSANSTLTQA
>Mature_657_residues
TPSMLDINSLFSAGGALARSVPGYIVRTQQREMAQAIADTIASSTILIAEAGTGTGKTFAYLVPALMTGGKVIISTGTKT
LQDQLFNRDIPTVQSALKIPVTVALLKGRANYVCHYHLELTFQESRPALVSREEVKYLNLIERYAKNSKSGDKSGLSEVP
ENASVWQYVTSTRDNCLGSNCPHYKDCFVIEARKQALSADVVVVNHHLFFADVMLRDEGLSELLPTCNTVIFDEAHQLPE
TASLFFGESVSTGQLLELARDSEAEALGNAKDFAPLPPAIAAMEKAARDLRLTVEGENMRMPVTAIKANAKFAGALSELQ
ERLDSLIDLLESQAERSDGLENCWQRSREIAGRIKRWQEQAEAEGFVRWVEVFSQALQLNATPLSIAGIFNKQLGGPPRA
WIFTSATLSVKGDFSHYNDQMGLNTGTIPSHSMCWESPFDFAHQALLYVPAGIPEPNSSRYTEDVVKAALPVLKASRGRA
FFLCTSLRAMQKTYELLLEAFKRERLDYPLLLQGQGARSHMLERFRKMGNAILIGSQSFWEGVDVRGEALSLVVIDKLPF
APPDDPVLAARIDKINKEGRNAFMEYQLPHAVINLKQGAGRLIRDETDRGVLMICDPRLISRPYGRKIWQSLPPMKRTRN
LAEVEAFFSANSTLTQA

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase ATP-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788110, Length=647, Percent_Identity=44.3585780525502, Blast_Score=533, Evalue=1e-152,
Organism=Escherichia coli, GI1787018, Length=246, Percent_Identity=28.4552845528455, Blast_Score=102, Evalue=9e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014001
- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR006935 [H]

Pfam domain/function: PF06733 DEAD_2; PF04851 ResIII [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 72804; Mature: 72673

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPSMLDINSLFSAGGALARSVPGYIVRTQQREMAQAIADTIASSTILIAEAGTGTGKTF
CCCCCCCHHHHHHCCCHHHHCCCCCEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCHH
AYLVPALMTGGKVIISTGTKTLQDQLFNRDIPTVQSALKIPVTVALLKGRANYVCHYHLE
HHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCEEEEEEEE
LTFQESRPALVSREEVKYLNLIERYAKNSKSGDKSGLSEVPENASVWQYVTSTRDNCLGS
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCC
NCPHYKDCFVIEARKQALSADVVVVNHHLFFADVMLRDEGLSELLPTCNTVIFDEAHQLP
CCCCCCCEEEEEEHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHCCEEEHHHHCCC
ETASLFFGESVSTGQLLELARDSEAEALGNAKDFAPLPPAIAAMEKAARDLRLTVEGENM
CHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCE
RMPVTAIKANAKFAGALSELQERLDSLIDLLESQAERSDGLENCWQRSREIAGRIKRWQE
ECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QAEAEGFVRWVEVFSQALQLNATPLSIAGIFNKQLGGPPRAWIFTSATLSVKGDFSHYND
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHCCC
QMGLNTGTIPSHSMCWESPFDFAHQALLYVPAGIPEPNSSRYTEDVVKAALPVLKASRGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
AFFLCTSLRAMQKTYELLLEAFKRERLDYPLLLQGQGARSHMLERFRKMGNAILIGSQSF
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCHHH
WEGVDVRGEALSLVVIDKLPFAPPDDPVLAARIDKINKEGRNAFMEYQLPHAVINLKQGA
HCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHEEECCCC
GRLIRDETDRGVLMICDPRLISRPYGRKIWQSLPPMKRTRNLAEVEAFFSANSTLTQA
CCHHCCCCCCCEEEEECCHHHCCCCHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
TPSMLDINSLFSAGGALARSVPGYIVRTQQREMAQAIADTIASSTILIAEAGTGTGKTF
CCCCCCHHHHHHCCCHHHHCCCCCEEECHHHHHHHHHHHHHCCCEEEEEECCCCCCCHH
AYLVPALMTGGKVIISTGTKTLQDQLFNRDIPTVQSALKIPVTVALLKGRANYVCHYHLE
HHHHHHHHCCCEEEEECCCHHHHHHHHCCCCHHHHHHHHCCCEEEEECCCCCEEEEEEEE
LTFQESRPALVSREEVKYLNLIERYAKNSKSGDKSGLSEVPENASVWQYVTSTRDNCLGS
EEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHCCCCCCCC
NCPHYKDCFVIEARKQALSADVVVVNHHLFFADVMLRDEGLSELLPTCNTVIFDEAHQLP
CCCCCCCEEEEEEHHHHCCCCEEEEECHHHHHHHHHHHCCHHHHHHHHCCEEEHHHHCCC
ETASLFFGESVSTGQLLELARDSEAEALGNAKDFAPLPPAIAAMEKAARDLRLTVEGENM
CHHHHHHCCCCCCHHHHHHHCCCCHHHCCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCE
RMPVTAIKANAKFAGALSELQERLDSLIDLLESQAERSDGLENCWQRSREIAGRIKRWQE
ECCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
QAEAEGFVRWVEVFSQALQLNATPLSIAGIFNKQLGGPPRAWIFTSATLSVKGDFSHYND
HHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHCCCCCCEEEEEEEEEEEECCHHHCCC
QMGLNTGTIPSHSMCWESPFDFAHQALLYVPAGIPEPNSSRYTEDVVKAALPVLKASRGR
CCCCCCCCCCCCCCCCCCCHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
AFFLCTSLRAMQKTYELLLEAFKRERLDYPLLLQGQGARSHMLERFRKMGNAILIGSQSF
EEEEHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEECCHHH
WEGVDVRGEALSLVVIDKLPFAPPDDPVLAARIDKINKEGRNAFMEYQLPHAVINLKQGA
HCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHEEECCCHHHEEECCCC
GRLIRDETDRGVLMICDPRLISRPYGRKIWQSLPPMKRTRNLAEVEAFFSANSTLTQA
CCHHCCCCCCCEEEEECCHHHCCCCHHHHHHHCCCHHHHCCHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]