Click here to switch to the map view.

The map label for this gene is fliQ [H]

Identifier: 82702485

GI number: 82702485

Start: 1543699

End: 1543968

Strand: Direct

Name: fliQ [H]

Synonym: Nmul_A1356

Alternate gene names: 82702485

Gene position: 1543699-1543968 (Clockwise)

Preceding gene: 82702484

Following gene: 82702486

Centisome position: 48.48

GC content: 52.96

Gene sequence:

>270_bases
ATGACACCTGAAAGCGTAATGACACTCGGCCAGAAAGCAATGGAAGTTACCTTGATGGTTTCCGCTCCCTTGTTACTGGC
CGCACTCGCCACCGGATTGCTGGTCAGCATCTTTCAGGCTGCTACCCAGATCAATGAGATGACTCTGTCTTTCATTCCCA
AACTCGTGGTCCTGTTTGCCATGCTGGTGCTTGCAGGCCCGTGGATGCTTTCGGTGCTGCTCGACTATATGAGGCAGGTG
CTGGAAGGAATTCCCGGAGTGATCGGATAG

Upstream 100 bases:

>100_bases
GCTGGTCGACGGATGGCATATGCTGATCGGTTCGCTGGCAGAGAGCTTTTATTAAGGATGCAACATATTTATTCACCGGA
CGAGATGACGGAAAAAAACC

Downstream 100 bases:

>100_bases
TTGTCAGAACTATCCGGAAAAGATAGACAAAAGCGGCATCTTGCTTGTCACATCCCGCCCTCCAGTGCTTCCTGGATCAG
AGAGATAAAGCGGAATTTCA

Product: flagellar biosynthesis protein FliQ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 89; Mature: 88

Protein sequence:

>89_residues
MTPESVMTLGQKAMEVTLMVSAPLLLAALATGLLVSIFQAATQINEMTLSFIPKLVVLFAMLVLAGPWMLSVLLDYMRQV
LEGIPGVIG

Sequences:

>Translated_89_residues
MTPESVMTLGQKAMEVTLMVSAPLLLAALATGLLVSIFQAATQINEMTLSFIPKLVVLFAMLVLAGPWMLSVLLDYMRQV
LEGIPGVIG
>Mature_88_residues
TPESVMTLGQKAMEVTLMVSAPLLLAALATGLLVSIFQAATQINEMTLSFIPKLVVLFAMLVLAGPWMLSVLLDYMRQVL
EGIPGVIG

Specific function: Role in flagellar biosynthesis [H]

COG id: COG1987

COG function: function code NU; Flagellar biosynthesis pathway, component FliQ

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential). Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FliQ/MopD/SpaQ family [H]

Homologues:

Organism=Escherichia coli, GI1788260, Length=89, Percent_Identity=61.7977528089888, Blast_Score=89, Evalue=4e-20,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002191
- InterPro:   IPR006305 [H]

Pfam domain/function: PF01313 Bac_export_3 [H]

EC number: NA

Molecular weight: Translated: 9520; Mature: 9389

Theoretical pI: Translated: 4.30; Mature: 4.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
9.0 %Met     (Translated Protein)
9.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPESVMTLGQKAMEVTLMVSAPLLLAALATGLLVSIFQAATQINEMTLSFIPKLVVLFA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVLAGPWMLSVLLDYMRQVLEGIPGVIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TPESVMTLGQKAMEVTLMVSAPLLLAALATGLLVSIFQAATQINEMTLSFIPKLVVLFA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MLVLAGPWMLSVLLDYMRQVLEGIPGVIG
HHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12522265 [H]