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The map label for this gene is flgF [H]

Identifier: 82702454

GI number: 82702454

Start: 1514338

End: 1515090

Strand: Direct

Name: flgF [H]

Synonym: Nmul_A1325

Alternate gene names: 82702454

Gene position: 1514338-1515090 (Clockwise)

Preceding gene: 82702453

Following gene: 82702455

Centisome position: 47.56

GC content: 59.1

Gene sequence:

>753_bases
ATGGATCGCATGATTTATGTTGCCATGACGGGGGCCAAGCACGCGCTGGGACAGCATGCTGCGGTATCTCACAATCTGGC
GAACGCGAACACTCCGGGATACCGGGCCGAAATAAATGCGCTGCGCGCTGTACCGGTGTTCAGCGATACCCTCGCTACAA
GGGCATTTGTGGTGGATTCAAGTGTCGGGGCGGATTTCCGTCCGGGCACAGTGCAGAACACTGCACGTGAACTTGACGTA
GCAATACAGGGAGCCGGGTGGATCGCGGTACAACTGGCGGATGGTAGCGAGGCTTATACTCGCAACGGCGATCTTCATGT
CAGTGCCAATGGGGTATTGCAGACCCGCGACGGGTTGAACGTGCTGGGCGATACCGGGCTGATTTCCATCCAGCCGAATG
CGAAAGTGACCATAGGTACCGACGGCACAATTTCGACAGTACCGGCCGGAGCAGGGACGAGCGAACCCAATCTGGCTGTC
GCAGTGGGCCGGATCAAGCTGGTTAATCCGCCTGAAGCGCAGCTTGTTCGCGGTTCCGACGGGCTCTTCCGGCTCAGCGG
CGGTGGCGAGGCGGAGGCGGATGGAAACGTTACCTTGAGCAGCGGTGCACTGGAGGGAAGCAACGTCAATGTCGTGGAGG
CGATGGTGGACATGATTTCCCTTTCCCGCCAGTTCGAGACGCATATGAAGCTGTTGCAGAATGCGGAAGGCAATGCCCAA
CGGGCGAGCCAGCTCCTGTCGATCAGCGGGTGA

Upstream 100 bases:

>100_bases
TTACCAAGCCAATGCCCAGACGATCAAGACTCAGGATCAGATACTTCAGACAGTGGTGAACCTGAAGTAATCCGAGTGGC
AGGCAATCATTGGAGTAAAT

Downstream 100 bases:

>100_bases
GGTGGGGACACAGTCCTGTACGTTTCCGTATTGATACGTCACCTGATGAGTAATTGCAGCCAGATAATAGAAAATAATTT
TTCATGGAGTTGATGTGATT

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 250; Mature: 250

Protein sequence:

>250_residues
MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAVPVFSDTLATRAFVVDSSVGADFRPGTVQNTARELDV
AIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDGLNVLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAV
AVGRIKLVNPPEAQLVRGSDGLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQ
RASQLLSISG

Sequences:

>Translated_250_residues
MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAVPVFSDTLATRAFVVDSSVGADFRPGTVQNTARELDV
AIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDGLNVLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAV
AVGRIKLVNPPEAQLVRGSDGLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQ
RASQLLSISG
>Mature_250_residues
MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAVPVFSDTLATRAFVVDSSVGADFRPGTVQNTARELDV
AIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDGLNVLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAV
AVGRIKLVNPPEAQLVRGSDGLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQ
RASQLLSISG

Specific function: Unknown

COG id: COG4787

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787317, Length=256, Percent_Identity=49.21875, Blast_Score=221, Evalue=3e-59,
Organism=Escherichia coli, GI1787318, Length=274, Percent_Identity=31.021897810219, Blast_Score=83, Evalue=2e-17,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 25816; Mature: 25816

Theoretical pI: Translated: 5.01; Mature: 5.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAVPVFSDTLATRAFVVDS
CCCEEEEEECCCHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHEEEEEEEC
SVGADFRPGTVQNTARELDVAIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDGLN
CCCCCCCCCCHHHHHHEEEEEEECCCEEEEEEECCCCCEECCCCEEEECCCEEEECCCCE
VLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAVAVGRIKLVNPPEAQLVRGSD
EECCCCEEEECCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCHHEEEECCC
GLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQ
CEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RASQLLSISG
HHHHHHCCCC
>Mature Secondary Structure
MDRMIYVAMTGAKHALGQHAAVSHNLANANTPGYRAEINALRAVPVFSDTLATRAFVVDS
CCCEEEEEECCCHHHHCCCHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHHEEEEEEEC
SVGADFRPGTVQNTARELDVAIQGAGWIAVQLADGSEAYTRNGDLHVSANGVLQTRDGLN
CCCCCCCCCCHHHHHHEEEEEEECCCEEEEEEECCCCCEECCCCEEEECCCEEEECCCCE
VLGDTGLISIQPNAKVTIGTDGTISTVPAGAGTSEPNLAVAVGRIKLVNPPEAQLVRGSD
EECCCCEEEECCCCEEEECCCCCEEEECCCCCCCCCCEEEEEEEEEEECCCHHEEEECCC
GLFRLSGGGEAEADGNVTLSSGALEGSNVNVVEAMVDMISLSRQFETHMKLLQNAEGNAQ
CEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
RASQLLSISG
HHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]