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The map label for this gene is flgD [H]

Identifier: 82702452

GI number: 82702452

Start: 1512315

End: 1512983

Strand: Direct

Name: flgD [H]

Synonym: Nmul_A1323

Alternate gene names: 82702452

Gene position: 1512315-1512983 (Clockwise)

Preceding gene: 82702451

Following gene: 82702453

Centisome position: 47.49

GC content: 55.46

Gene sequence:

>669_bases
ATGAGTACTATCCAGAATACACAGCCGACAAGTAATCCATTTGCCGCTTATGGAACCAGAAGTACTGCCAAACCGGCAGA
AGAAGACTTGCAGGACCGGTTTCTCAAGCTGCTGGTTACCCAAATGAAAAACCAGGATCCGCTCAATCCTCTCGACAACG
CGCAAGTCACCACACAGCTTGCTCAAATCAGTACCGTGAACGGTGTCGAGAGACTTAATGCGACCATTCGAACCATTGCC
GACAGTTTTACTGCCGGGCAATCACTGCAAGCCGCCGGCATGATCGGAAGAGAGGTCCTTGTGCCTGGCTCCGCCTTGCA
GTTGGCCAATGGAGCGGCACGCTTCGGGATCGAACTGACGCAACCCGCGGATGAGGTAAAGGTAAGAATACATGACGCGG
CCGGCCGCGAGATTCAAGTCATGAATCTGGGTCCTCAGGCGGCGGGTTCCCTCGAATTGGCGTGGGATGGCAAGACGAGT
GATGGCAGCCAGGCAGCGAACGGGAACTACAGCATAAGCGTTGCCGCGCTGCGTGGCGATCAGAAGGTGGAAGTACAGGC
ATTGGCGGCGGCAATCGTTCAAGGCGTATCCCAGGGAAATCAAGGCGTGCAACTGGACGTCGGCAGGCTGGGGATGGTGG
GATTGGCCGATATCAGGCAGATTTTTTAG

Upstream 100 bases:

>100_bases
GATTTCTGCTTCGCGCTCGTACCAGAACAATGTGGACATGATGAATACCGCGAAGACGTTACTGCTGAAAACCCTCACGA
TCGGACAATAGGAAATCCCC

Downstream 100 bases:

>100_bases
GCTGAGGTAGGGAAGGGCCTGCGGCCGAAAGCGGTCCAGCTACAGGACATTTGGCATTTATCACGGTATTCAGTACGAAC
GAACAGGCAGGGGAGCGAAA

Product: flagellar basal body rod modification protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 221

Protein sequence:

>222_residues
MSTIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQLAQISTVNGVERLNATIRTIA
DSFTAGQSLQAAGMIGREVLVPGSALQLANGAARFGIELTQPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTS
DGSQAANGNYSISVAALRGDQKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF

Sequences:

>Translated_222_residues
MSTIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQLAQISTVNGVERLNATIRTIA
DSFTAGQSLQAAGMIGREVLVPGSALQLANGAARFGIELTQPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTS
DGSQAANGNYSISVAALRGDQKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF
>Mature_221_residues
STIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQLAQISTVNGVERLNATIRTIAD
SFTAGQSLQAAGMIGREVLVPGSALQLANGAARFGIELTQPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTSD
GSQAANGNYSISVAALRGDQKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF

Specific function: Required for flagellar hook formation. May act as a scaffolding protein [H]

COG id: COG1843

COG function: function code N; Flagellar hook capping protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgD family [H]

Homologues:

Organism=Escherichia coli, GI1787315, Length=202, Percent_Identity=43.0693069306931, Blast_Score=171, Evalue=5e-44,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005648 [H]

Pfam domain/function: PF03963 FlgD [H]

EC number: NA

Molecular weight: Translated: 23353; Mature: 23221

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQL
CCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AQISTVNGVERLNATIRTIADSFTAGQSLQAAGMIGREVLVPGSALQLANGAARFGIELT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCHHHHCCCHHHCCEEEC
QPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTSDGSQAANGNYSISVAALRGD
CCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCC
QKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF
CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC
>Mature Secondary Structure 
STIQNTQPTSNPFAAYGTRSTAKPAEEDLQDRFLKLLVTQMKNQDPLNPLDNAQVTTQL
CCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH
AQISTVNGVERLNATIRTIADSFTAGQSLQAAGMIGREVLVPGSALQLANGAARFGIELT
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEECCCCHHHHCCCHHHCCEEEC
QPADEVKVRIHDAAGREIQVMNLGPQAAGSLELAWDGKTSDGSQAANGNYSISVAALRGD
CCCCCEEEEEECCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEEEEEECCC
QKVEVQALAAAIVQGVSQGNQGVQLDVGRLGMVGLADIRQIF
CCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11677608; 12644504 [H]