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The map label for this gene is insD1 [C]

Identifier: 82702426

GI number: 82702426

Start: 1490270

End: 1490581

Strand: Direct

Name: insD1 [C]

Synonym: Nmul_A1297

Alternate gene names: 82702426

Gene position: 1490270-1490581 (Clockwise)

Preceding gene: 82702423

Following gene: 82702429

Centisome position: 46.8

GC content: 52.88

Gene sequence:

>312_bases
GTGTCCGTGAAATCGGGGGAAAACCCTGCTCTTCTTAACCGCAAACTGGAAGGAATGGGCAAGCCTGCTGTCAATCACAA
GCGGGTCTATCGCATCATGCGTCAGAACGGGCTGTTGCTGGCCCGATATACGGGCAAACAGCGCGTGCTGTCTCATGAAG
GCAAGGTCATTACCTTGTGTTCCAATTTGCGCTGGTGCTCGGATGGCTTTGAGATTCCCTGCTTGAATGGGCAGGTGATG
GGCCGGAGAGCGGATAGGTCTGCATGTTCCCGTTGCAAATTTTATAGAGCGTCATTGATGTGCTCCCCATAA

Upstream 100 bases:

>100_bases
CAGACCGAACTAGTTGTACCGCTTCCTGCTTGAACTCCGCTGCATATTTCCTTCGCGTTGCCATGACACACCTCCTGACT
CATTATCAGCCTTTTTAGAT

Downstream 100 bases:

>100_bases
AACGTGCCATCTGGAATCTAGGCTCAGGACTCATTAATTGAGATAGAAGATGACAGTTGCGGCGATACAGATGGCAGAGA
AGAAGGTATGGGCACAGCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 103; Mature: 102

Protein sequence:

>103_residues
MSVKSGENPALLNRKLEGMGKPAVNHKRVYRIMRQNGLLLARYTGKQRVLSHEGKVITLCSNLRWCSDGFEIPCLNGQVM
GRRADRSACSRCKFYRASLMCSP

Sequences:

>Translated_103_residues
MSVKSGENPALLNRKLEGMGKPAVNHKRVYRIMRQNGLLLARYTGKQRVLSHEGKVITLCSNLRWCSDGFEIPCLNGQVM
GRRADRSACSRCKFYRASLMCSP
>Mature_102_residues
SVKSGENPALLNRKLEGMGKPAVNHKRVYRIMRQNGLLLARYTGKQRVLSHEGKVITLCSNLRWCSDGFEIPCLNGQVMG
RRADRSACSRCKFYRASLMCSP

Specific function: Involved in the transposition of the insertion sequence is2 [C]

COG id: COG2801

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Escherichia coli, GI1790724, Length=70, Percent_Identity=55.7142857142857, Blast_Score=72, Evalue=9e-15,
Organism=Escherichia coli, GI1789424, Length=70, Percent_Identity=55.7142857142857, Blast_Score=72, Evalue=9e-15,
Organism=Escherichia coli, GI1789224, Length=70, Percent_Identity=55.7142857142857, Blast_Score=72, Evalue=9e-15,
Organism=Escherichia coli, GI1788305, Length=70, Percent_Identity=55.7142857142857, Blast_Score=72, Evalue=9e-15,
Organism=Escherichia coli, GI1787669, Length=70, Percent_Identity=55.7142857142857, Blast_Score=72, Evalue=9e-15,
Organism=Escherichia coli, GI1786558, Length=70, Percent_Identity=55.7142857142857, Blast_Score=72, Evalue=9e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR001584
- InterPro:   IPR012337
- InterPro:   IPR002514 [H]

Pfam domain/function: PF00665 rve; PF01527 Transposase_8 [H]

EC number: NA

Molecular weight: Translated: 11618; Mature: 11487

Theoretical pI: Translated: 10.76; Mature: 10.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.8 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
10.7 %Cys+Met (Translated Protein)
5.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVKSGENPALLNRKLEGMGKPAVNHKRVYRIMRQNGLLLARYTGKQRVLSHEGKVITLC
CCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCEEEEE
SNLRWCSDGFEIPCLNGQVMGRRADRSACSRCKFYRASLMCSP
CCCEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEECCC
>Mature Secondary Structure 
SVKSGENPALLNRKLEGMGKPAVNHKRVYRIMRQNGLLLARYTGKQRVLSHEGKVITLC
CCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHCCEEEEEECCCHHHHCCCCCEEEEE
SNLRWCSDGFEIPCLNGQVMGRRADRSACSRCKFYRASLMCSP
CCCEECCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA