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The map label for this gene is ccmB [H]

Identifier: 82702345

GI number: 82702345

Start: 1400698

End: 1401357

Strand: Reverse

Name: ccmB [H]

Synonym: Nmul_A1216

Alternate gene names: 82702345

Gene position: 1401357-1400698 (Counterclockwise)

Preceding gene: 82702346

Following gene: 82702344

Centisome position: 44.01

GC content: 60.61

Gene sequence:

>660_bases
ATGTTTTTCTGGATCCTCCGCCGAGATCTTCTGCTTGCGGCAAGACGCCGCTCCGATGTCCTGACGACGCTGTTTTTTTT
CATCATCGTCGTCAGTCTTTTCCCGCTTGGCGTCGGGCCGGAGATGAACATGCTTCGTGTGATGGCGCCAGGCGTGGTCT
GGGTGGCTGCTCTGCTGGCCTCGATGTTATCACTGGGACGCATGTTTTCCAGCGATTATCTGGATGGCACGCTGGAGCAG
ATGCTGCTCTCGCCCCAATCTCTGCCCCTGCTCGTATTGGGCAAGGCACTGGCCCACTGGCTCGTGACCGGGGTCCCCCT
TGTACTGATGGCGCCGGTATTGGGCATTCAGTACGATCTGACGGGTGATGCCCTTCTGGTGCTGACCGCTTCCCTGCTGC
TCGGAACGCCCGTGCTGAGCCTGATCGGTGCAATCGGCGCAGCGCTTACTCTGGGCCTGCGCGGCGGGGGCGTATTGGTC
TCGCTGCTGGTGTTGCCGCTGTACATTCCTGTGCTGATTTTCGGTGCGGGTGCAGTGGAAGCAAGCTCCGCCGGGTTAGG
GGCGGGAGCACACATGTCGCTGCTAGGCGCTTTCCTGCTGGCATCTCTCGTATTGGCGCCGTGGAGTACCGCGGTCGCGC
TGCGTATATCCCTGGAATAA

Upstream 100 bases:

>100_bases
ATAGAGCGGCACCTGGAACACGGGGGCATGATCGTGATGACCACCCACCAGGAAATCGAGATAGCAGGCGCCGCCATCCA
GCGGCTGCAGCTCACCTGAC

Downstream 100 bases:

>100_bases
AGAAGGTCGAAGAATCCCGGCAGCTCTTCATTGCGGATCGGCGAGCGCGGTGAAGAGGGGGTGCCAATCGCGGCAGGAGG
TTTACATGCAAATCCGCTTG

Product: heme exporter protein CcmB

Products: NA

Alternate protein names: Cytochrome c-type biogenesis protein CcmB [H]

Number of amino acids: Translated: 219; Mature: 219

Protein sequence:

>219_residues
MFFWILRRDLLLAARRRSDVLTTLFFFIIVVSLFPLGVGPEMNMLRVMAPGVVWVAALLASMLSLGRMFSSDYLDGTLEQ
MLLSPQSLPLLVLGKALAHWLVTGVPLVLMAPVLGIQYDLTGDALLVLTASLLLGTPVLSLIGAIGAALTLGLRGGGVLV
SLLVLPLYIPVLIFGAGAVEASSAGLGAGAHMSLLGAFLLASLVLAPWSTAVALRISLE

Sequences:

>Translated_219_residues
MFFWILRRDLLLAARRRSDVLTTLFFFIIVVSLFPLGVGPEMNMLRVMAPGVVWVAALLASMLSLGRMFSSDYLDGTLEQ
MLLSPQSLPLLVLGKALAHWLVTGVPLVLMAPVLGIQYDLTGDALLVLTASLLLGTPVLSLIGAIGAALTLGLRGGGVLV
SLLVLPLYIPVLIFGAGAVEASSAGLGAGAHMSLLGAFLLASLVLAPWSTAVALRISLE
>Mature_219_residues
MFFWILRRDLLLAARRRSDVLTTLFFFIIVVSLFPLGVGPEMNMLRVMAPGVVWVAALLASMLSLGRMFSSDYLDGTLEQ
MLLSPQSLPLLVLGKALAHWLVTGVPLVLMAPVLGIQYDLTGDALLVLTASLLLGTPVLSLIGAIGAALTLGLRGGGVLV
SLLVLPLYIPVLIFGAGAVEASSAGLGAGAHMSLLGAFLLASLVLAPWSTAVALRISLE

Specific function: Required for the export of heme to the periplasm for the biogenesis of c-type cytochromes [H]

COG id: COG2386

COG function: function code O; ABC-type transport system involved in cytochrome c biogenesis, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CcmB/CycW/HelB family [H]

Homologues:

Organism=Escherichia coli, GI1788528, Length=220, Percent_Identity=47.7272727272727, Blast_Score=155, Evalue=3e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003544 [H]

Pfam domain/function: PF03379 CcmB [H]

EC number: NA

Molecular weight: Translated: 22959; Mature: 22959

Theoretical pI: Translated: 7.70; Mature: 7.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFWILRRDLLLAARRRSDVLTTLFFFIIVVSLFPLGVGPEMNMLRVMAPGVVWVAALLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SMLSLGRMFSSDYLDGTLEQMLLSPQSLPLLVLGKALAHWLVTGVPLVLMAPVLGIQYDL
HHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCEECC
TGDALLVLTASLLLGTPVLSLIGAIGAALTLGLRGGGVLVSLLVLPLYIPVLIFGAGAVE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
ASSAGLGAGAHMSLLGAFLLASLVLAPWSTAVALRISLE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure
MFFWILRRDLLLAARRRSDVLTTLFFFIIVVSLFPLGVGPEMNMLRVMAPGVVWVAALLA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH
SMLSLGRMFSSDYLDGTLEQMLLSPQSLPLLVLGKALAHWLVTGVPLVLMAPVLGIQYDL
HHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCEECC
TGDALLVLTASLLLGTPVLSLIGAIGAALTLGLRGGGVLVSLLVLPLYIPVLIFGAGAVE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCC
ASSAGLGAGAHMSLLGAFLLASLVLAPWSTAVALRISLE
CCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]