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The map label for this gene is 82702178

Identifier: 82702178

GI number: 82702178

Start: 1210947

End: 1211618

Strand: Reverse

Name: 82702178

Synonym: Nmul_A1049

Alternate gene names: NA

Gene position: 1211618-1210947 (Counterclockwise)

Preceding gene: 82702179

Following gene: 82702177

Centisome position: 38.05

GC content: 56.4

Gene sequence:

>672_bases
ATGACCTTCAAGCACAGCAGCATATCCTTGTCTGGCCTGGTGTTCGTCGTTGTGATCCACGCCGGATTGCTTTATTTCCT
GTTCAAGCAACAGTTGATTCCCCCGCCGGAACAATTAGCGACACTGATGGTAAATTTCATTCCTTCGCCCCAGCCGAAGG
AAGAGGCCAAGCCTGAAACGCCACCTCCTCCGCCCAAGCCCAAGCCTAAACCTGTAAAGAAACCGCAACCGCAGCAACTC
GTTGCAAAAGCGCCCCCATTGTCCGAGAGTGAGCCAGTCGCCCCGCCTCCCCCGCCGGAACCGGCACTCGAAGCCGAGCC
TGAAGCCGAACCCGAACCGGTAGTGGAAGCAGCTCCTGCGCCGCAAATGCCGGCTGGTCCGGTTTCACTTTCCTCGGAAT
TATCAGTCGCGTGCCCCCACTTGAATGCACCGACTTACCCGGCACTTTCGAAACGGCTGGGTGAAGAAGGAAAGCTCGTG
CTAAGAGTGGAACTGGATGAAAAAGGATACGTCGATGTGGCACACGTAGTGAACAGCAGCGGTTTCAAACGGTTGGACGA
AGCTGCCATGGCCGCTGTCAAAACCTGGCGCTGCACACCCACCGTACGCAATGGTCAACCGGTGCGGGCTGTTGCCCTGC
AACCCTTCAACTTTGTACTCCAAGGAGATTAA

Upstream 100 bases:

>100_bases
CTGATCAACAAGTCGCTCGTCGAGGAATGGCTGGCGCGAAATGCCGTCGATACCGCGAACGGAAAGCAGAATGGAAAGTA
TTGAGACCGCAGGGCAGGCA

Downstream 100 bases:

>100_bases
CCTAATGCAAACAGGTCTCGGATTTTCAAATTTTCTGGCGCAGCTCGACGGCGTCGGTATGACGGTGCTCATACTGCTGC
TTGCACTCTCTGTAGCAAGC

Product: TonB-like protein

Products: NA

Alternate protein names: NB Protein; NB-Like; NB C-Terminal; NB Domain Protein; NB-Like Protein; Nb Family Protein; NB Domain-Containing Protein; NB Family C-Terminal Domain-Containing

Number of amino acids: Translated: 223; Mature: 222

Protein sequence:

>223_residues
MTFKHSSISLSGLVFVVVIHAGLLYFLFKQQLIPPPEQLATLMVNFIPSPQPKEEAKPETPPPPPKPKPKPVKKPQPQQL
VAKAPPLSESEPVAPPPPPEPALEAEPEAEPEPVVEAAPAPQMPAGPVSLSSELSVACPHLNAPTYPALSKRLGEEGKLV
LRVELDEKGYVDVAHVVNSSGFKRLDEAAMAAVKTWRCTPTVRNGQPVRAVALQPFNFVLQGD

Sequences:

>Translated_223_residues
MTFKHSSISLSGLVFVVVIHAGLLYFLFKQQLIPPPEQLATLMVNFIPSPQPKEEAKPETPPPPPKPKPKPVKKPQPQQL
VAKAPPLSESEPVAPPPPPEPALEAEPEAEPEPVVEAAPAPQMPAGPVSLSSELSVACPHLNAPTYPALSKRLGEEGKLV
LRVELDEKGYVDVAHVVNSSGFKRLDEAAMAAVKTWRCTPTVRNGQPVRAVALQPFNFVLQGD
>Mature_222_residues
TFKHSSISLSGLVFVVVIHAGLLYFLFKQQLIPPPEQLATLMVNFIPSPQPKEEAKPETPPPPPKPKPKPVKKPQPQQLV
AKAPPLSESEPVAPPPPPEPALEAEPEAEPEPVVEAAPAPQMPAGPVSLSSELSVACPHLNAPTYPALSKRLGEEGKLVL
RVELDEKGYVDVAHVVNSSGFKRLDEAAMAAVKTWRCTPTVRNGQPVRAVALQPFNFVLQGD

Specific function: Unknown

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23989; Mature: 23858

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTFKHSSISLSGLVFVVVIHAGLLYFLFKQQLIPPPEQLATLMVNFIPSPQPKEEAKPET
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCC
PPPPPKPKPKPVKKPQPQQLVAKAPPLSESEPVAPPPPPEPALEAEPEAEPEPVVEAAPA
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
PQMPAGPVSLSSELSVACPHLNAPTYPALSKRLGEEGKLVLRVELDEKGYVDVAHVVNSS
CCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCC
GFKRLDEAAMAAVKTWRCTPTVRNGQPVRAVALQPFNFVLQGD
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEECC
>Mature Secondary Structure 
TFKHSSISLSGLVFVVVIHAGLLYFLFKQQLIPPPEQLATLMVNFIPSPQPKEEAKPET
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHCCCCC
PPPPPKPKPKPVKKPQPQQLVAKAPPLSESEPVAPPPPPEPALEAEPEAEPEPVVEAAPA
CCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCC
PQMPAGPVSLSSELSVACPHLNAPTYPALSKRLGEEGKLVLRVELDEKGYVDVAHVVNSS
CCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCC
GFKRLDEAAMAAVKTWRCTPTVRNGQPVRAVALQPFNFVLQGD
CHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA