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The map label for this gene is tnpR [H]

Identifier: 82702115

GI number: 82702115

Start: 1144213

End: 1144485

Strand: Direct

Name: tnpR [H]

Synonym: Nmul_A0986

Alternate gene names: 82702115

Gene position: 1144213-1144485 (Clockwise)

Preceding gene: 82702105

Following gene: 82702116

Centisome position: 35.93

GC content: 50.55

Gene sequence:

>273_bases
ATGCTCATAGTCCATTCCATGGACAGGTTGGCCCGTAACATCGAAGACATGCTCAGGCTGGTGGGGGAAATGAATAATAA
GGGGGTATTGGTTCAGTTCGTTAAAGAGAATATGAGCTTTGCTGCTGGCAGCGAAGATCCTTGCTCTACGTTGATGTTTA
CCATGCTCAGCGCTTTCGCTCAGTTTGAGCGATCCCTGATCAAAGAGCGGCAACGGCAAGGAATAGTCCTGGCAAAGGCC
GAAGGAGTCTACAAGGCAGGAAGCCCGCTCTGA

Upstream 100 bases:

>100_bases
CAAATTTGGTTTTCGAAAGCTATTTAATGACAAGGCGTCAGCCAAGAATACAAACAGGCCGCAACTCCAGGTCGCACTCG
ACCATGTTCGTGCAGGGGAT

Downstream 100 bases:

>100_bases
ATGCAGAGAGGATTGTTCAGTTGCGGGAGCAGGCAGCAGGGGGGCGAACCGGACAAAGCTGGCGAAGGAGTTCGGGATAA
GCCGGGAAACCCTTTATCAA

Product: resolvase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 90; Mature: 90

Protein sequence:

>90_residues
MLIVHSMDRLARNIEDMLRLVGEMNNKGVLVQFVKENMSFAAGSEDPCSTLMFTMLSAFAQFERSLIKERQRQGIVLAKA
EGVYKAGSPL

Sequences:

>Translated_90_residues
MLIVHSMDRLARNIEDMLRLVGEMNNKGVLVQFVKENMSFAAGSEDPCSTLMFTMLSAFAQFERSLIKERQRQGIVLAKA
EGVYKAGSPL
>Mature_90_residues
MLIVHSMDRLARNIEDMLRLVGEMNNKGVLVQFVKENMSFAAGSEDPCSTLMFTMLSAFAQFERSLIKERQRQGIVLAKA
EGVYKAGSPL

Specific function: Resolvase catalyzes the resolution (a site-specific recombination) of the cointegrated replicon to yield the final transposition products [H]

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 10067; Mature: 10067

Theoretical pI: Translated: 8.51; Mature: 8.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
7.8 %Met     (Translated Protein)
8.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
7.8 %Met     (Mature Protein)
8.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLIVHSMDRLARNIEDMLRLVGEMNNKGVLVQFVKENMSFAAGSEDPCSTLMFTMLSAFA
CEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QFERSLIKERQRQGIVLAKAEGVYKAGSPL
HHHHHHHHHHHHCCEEEECCCCCCCCCCCC
>Mature Secondary Structure
MLIVHSMDRLARNIEDMLRLVGEMNNKGVLVQFVKENMSFAAGSEDPCSTLMFTMLSAFA
CEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
QFERSLIKERQRQGIVLAKAEGVYKAGSPL
HHHHHHHHHHHHCCEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2992807; 6312271; 3029727 [H]