Click here to switch to the map view.

The map label for this gene is 82702113

Identifier: 82702113

GI number: 82702113

Start: 1143423

End: 1143845

Strand: Reverse

Name: 82702113

Synonym: Nmul_A0984

Alternate gene names: NA

Gene position: 1143845-1143423 (Counterclockwise)

Preceding gene: 82702114

Following gene: 82702112

Centisome position: 35.92

GC content: 53.19

Gene sequence:

>423_bases
ATGAGCGCGACTAGCTTTATCTACACAAATATTCTTCTATATCTGCTCTCTCCGAGTGCGGCCAAGGCAAACCGCGCTGA
AGAAGTCCTGCGAGGTGGCGGCAGGATCAGTGTACAGGTCCTTAACGAAATGGCCAGCGTCATGCGCCGCAAGCTTTCCA
TGCCATGGCATGAGGTCAACGATGTGCTTTTCCTGATCCGCTCAATTTGTCCCGTCGAACCGCTGACGCTGGAAGTACAC
GACCGGGGGCGGCGGGTTGCAGAGCGGTGGGGCCTGAGCTTGTACGATGGGATGATTGCAGCGGCGGCGCTGCTCTCAAA
CTGCGATATTCTATATTCTGAGGACATGCAGCACGATTTGCTGATAGACGAGCAATTGCGAATACAGAATCCCTTTTTCG
TAAACTGCAATGGCGAAAACTGA

Upstream 100 bases:

>100_bases
GAGATCAGAAAAAAACCGGGGGCAGATGAATTTCTGGAAAGGTTGCGCAAGTATCGGGGCAGACTTCCCGCCGATTTCAG
GTTTGACCGGGAAGAAGCGA

Downstream 100 bases:

>100_bases
GGTCATATGCGGGTTGATACGCAAACGAAGGAGGAAGCAAGCCGGGTGCTGGGGGAAACGGGCCTTGCAGTTTCCCACGA
CATACGCCTGTTTTTAAGAA

Product: PilT protein-like

Products: NA

Alternate protein names: PilT Protein Domain Protein; PilT Protein Domain-Containing Protein; PilT Protein-Like; PIN Domain Protein; Pilt Protein Domain Protein; PilT-Like Protein; PilT Protein N-Terminal

Number of amino acids: Translated: 140; Mature: 139

Protein sequence:

>140_residues
MSATSFIYTNILLYLLSPSAAKANRAEEVLRGGGRISVQVLNEMASVMRRKLSMPWHEVNDVLFLIRSICPVEPLTLEVH
DRGRRVAERWGLSLYDGMIAAAALLSNCDILYSEDMQHDLLIDEQLRIQNPFFVNCNGEN

Sequences:

>Translated_140_residues
MSATSFIYTNILLYLLSPSAAKANRAEEVLRGGGRISVQVLNEMASVMRRKLSMPWHEVNDVLFLIRSICPVEPLTLEVH
DRGRRVAERWGLSLYDGMIAAAALLSNCDILYSEDMQHDLLIDEQLRIQNPFFVNCNGEN
>Mature_139_residues
SATSFIYTNILLYLLSPSAAKANRAEEVLRGGGRISVQVLNEMASVMRRKLSMPWHEVNDVLFLIRSICPVEPLTLEVHD
RGRRVAERWGLSLYDGMIAAAALLSNCDILYSEDMQHDLLIDEQLRIQNPFFVNCNGEN

Specific function: Unknown

COG id: COG5573

COG function: function code R; Predicted nucleic-acid-binding protein, contains PIN domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15839; Mature: 15707

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSATSFIYTNILLYLLSPSAAKANRAEEVLRGGGRISVQVLNEMASVMRRKLSMPWHEVN
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCHHHHH
DVLFLIRSICPVEPLTLEVHDRGRRVAERWGLSLYDGMIAAAALLSNCDILYSEDMQHDL
HHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCC
LIDEQLRIQNPFFVNCNGEN
CCCCCCCCCCCEEEEECCCC
>Mature Secondary Structure 
SATSFIYTNILLYLLSPSAAKANRAEEVLRGGGRISVQVLNEMASVMRRKLSMPWHEVN
CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHCCCHHHHH
DVLFLIRSICPVEPLTLEVHDRGRRVAERWGLSLYDGMIAAAALLSNCDILYSEDMQHDL
HHHHHHHHHCCCCCEEEEECHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCCCCCC
LIDEQLRIQNPFFVNCNGEN
CCCCCCCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA