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The map label for this gene is yhcQ [C]

Identifier: 82702055

GI number: 82702055

Start: 1055859

End: 1057703

Strand: Reverse

Name: yhcQ [C]

Synonym: Nmul_A0926

Alternate gene names: 82702055

Gene position: 1057703-1055859 (Counterclockwise)

Preceding gene: 82702056

Following gene: 82702054

Centisome position: 33.22

GC content: 54.8

Gene sequence:

>1845_bases
GTGACACAGCCCGCGTCGAATGCAGAGACTTCGACCCCAGGGATTTCTGCTGAATCAAAAGATCAAGTAACTCTATACGG
CGTTTCCAGCGGATACCGCACTGGCCAAGGCCCTTCACAAGCATGGCTTGGGCGTCTGTGCGGCATGCTGGACGGGGTCG
AAACGGGCCTTCTTGTAATAGAGGAATCCGCTAATACTTATGTTCCAGCAGGTATTTGGCCTCATGGAACACGGGATGTC
ACTCATCTTGGCAGCGCCGTGCAAAAGTGCCTTATTTGCCGGGCAGGCAACACGCAGCCCGGAAAAACCGATCAAACGAT
TCTGATTACCTGGCCCATCGAGCTGAATGGACGCCTGCACGGAGCGGTAGCGCTTGAGGTCACGCAGCGTCCCGCTGCCG
CGCTGCAAAAGATAAATCAGCAATTAAGTTGGGGAATGGGATGGTTTGAATCCCATTTCTGGCGCCAGAAAAGTACTGAC
GATTCTCGGCAACTGGAACGCGCGGCGATAGCGCTGGATGTAGCCGCGCTGGCAGGAGAACACCCAAAGCTCGAAGATGC
TTCCCTCGCGATTGCAAACGAACTATGCAAACGTCTTGCCTGCACGCGAATCGCGATTGGCATGGAGCGAAAAAATCAGG
TTCACCTGATTGCACTTTCCAACTCTGCCTGGTTTGAAAAAAAAAGCCAGTTTGTGACCGAAATCGAGAATGCCATGGAC
GAAGCGCTCGATCAGCGTAAAACCATCGCATATCCCCCGATCGAGGGACTGACCAAAGGCATTGCGGTAGCAAACAAGGA
TATAGCCAAGACAGGTTCGGTTCTGTCCATAGTACTGTGGAGCGCCGGGCGAGGCGTGGGCGTGATTACATTGGAGCGAG
CAGAAACACGCTTTATGCTCGCCGACGTGGAGCTATGCCAGGCTACGGCGTCGTTAATCGGCCCCATCTTGGATATGAAA
GAGGATGCGACTCATTGGATTGCGGGTCGCTCCGCGCAGCAGCTGCGCGCAGCTGCTCAAGCTCTGGTGGATCCACGTCG
CCCGAGTTTCCGCTACGCTGCTGCTTTCCTGCTGGCATTTCTGATTTTCATTTCGGTATTTGAAGCTGAATACCGGGTCC
CCGCCAAAGCAGTGCTGGAAGGTGAGGTCCAGCGGGCGGTCGTTGCGCCCTTTGAAGGCTATATCGCTCAAGCTTATATA
CGGGCCGGTCAAACCGTGAAACACGGACAATTGCTTGCCAAGCTGGATGATCGCGATTTGCTGGTAGAGCGCCAGAAATG
GCTGAGCGAATTTGAGCAGAATGATCGTAAGTACCGCGATGCGCTTGCCAAACGAGATCGACCGCAAGTTCGTATTCTGG
TGGCGCAAGTCGCGCAAGCGGAGGCCCAGCTGACCCTCGTGGAAGAAAAGCTGGCGCGCACTGCCATTCGTGCCCCTTTT
GACGGGATCGTGGTGACGGGTGATCTGAGCCAGATGTTTGGAAGCCCGGTGGAGCGAGGGAAACTTTTGTTTGAAGTTGC
ACCGCTCGATGCCTACAGGGTCATACTCAAGGTCGATGAGCGGGATATTCGTGATGTGGCGGCAGGACAAAAAGGCACTA
TTGTTCTGTCCGGCCTATCAGCCGAGTCCATGCCTCTGGAGGTGATCAATATCTCAATCGCCGAAGCCGAAGAGGGGCAC
AATTATTTTCGTGTCGAGGCGAAGCTTCAGCATGCCCCTCCACGACTTCGCCCCGGGATGGAGGGCGTAGGGAAAATTAG
TGTCGGTGAACGAACGTTGATCTGGATATGGACCCATCGATTTATCGACTGGCTGCGTATGCTGAGCTGGAACTGGCTGC
CGTGA

Upstream 100 bases:

>100_bases
TTGCCCCGGATGGCTCGCTGCGTGTCGCTTCATCCAATGGCGTGGTGTATGAGGCTTTGGTATGAAACAAATGAGTGACA
GACCAGACAGGGGTAGTTAA

Downstream 100 bases:

>100_bases
ACCTGAATCCATAGGAAGCAGGTAGTGGCTGAATCTTCCCTGAGTAGCTCCTGGTATCGTGTCGCTGATCTGAAACCGGT
CCTGCGGACGCATGCCAAGG

Product: GAF domain-containing protein

Products: NA

Alternate protein names: Phytochrome Sensor Protein; GAF Domain Protein; Membrane-Fusion Protein; Signal Transduction Protein; Membrane-Fusion Protein-Like; GAF Domain-Containing; Membrane-Fusion Protein-Like Protein

Number of amino acids: Translated: 614; Mature: 613

Protein sequence:

>614_residues
MTQPASNAETSTPGISAESKDQVTLYGVSSGYRTGQGPSQAWLGRLCGMLDGVETGLLVIEESANTYVPAGIWPHGTRDV
THLGSAVQKCLICRAGNTQPGKTDQTILITWPIELNGRLHGAVALEVTQRPAAALQKINQQLSWGMGWFESHFWRQKSTD
DSRQLERAAIALDVAALAGEHPKLEDASLAIANELCKRLACTRIAIGMERKNQVHLIALSNSAWFEKKSQFVTEIENAMD
EALDQRKTIAYPPIEGLTKGIAVANKDIAKTGSVLSIVLWSAGRGVGVITLERAETRFMLADVELCQATASLIGPILDMK
EDATHWIAGRSAQQLRAAAQALVDPRRPSFRYAAAFLLAFLIFISVFEAEYRVPAKAVLEGEVQRAVVAPFEGYIAQAYI
RAGQTVKHGQLLAKLDDRDLLVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAEAQLTLVEEKLARTAIRAPF
DGIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVILKVDERDIRDVAAGQKGTIVLSGLSAESMPLEVINISIAEAEEGH
NYFRVEAKLQHAPPRLRPGMEGVGKISVGERTLIWIWTHRFIDWLRMLSWNWLP

Sequences:

>Translated_614_residues
MTQPASNAETSTPGISAESKDQVTLYGVSSGYRTGQGPSQAWLGRLCGMLDGVETGLLVIEESANTYVPAGIWPHGTRDV
THLGSAVQKCLICRAGNTQPGKTDQTILITWPIELNGRLHGAVALEVTQRPAAALQKINQQLSWGMGWFESHFWRQKSTD
DSRQLERAAIALDVAALAGEHPKLEDASLAIANELCKRLACTRIAIGMERKNQVHLIALSNSAWFEKKSQFVTEIENAMD
EALDQRKTIAYPPIEGLTKGIAVANKDIAKTGSVLSIVLWSAGRGVGVITLERAETRFMLADVELCQATASLIGPILDMK
EDATHWIAGRSAQQLRAAAQALVDPRRPSFRYAAAFLLAFLIFISVFEAEYRVPAKAVLEGEVQRAVVAPFEGYIAQAYI
RAGQTVKHGQLLAKLDDRDLLVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAEAQLTLVEEKLARTAIRAPF
DGIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVILKVDERDIRDVAAGQKGTIVLSGLSAESMPLEVINISIAEAEEGH
NYFRVEAKLQHAPPRLRPGMEGVGKISVGERTLIWIWTHRFIDWLRMLSWNWLP
>Mature_613_residues
TQPASNAETSTPGISAESKDQVTLYGVSSGYRTGQGPSQAWLGRLCGMLDGVETGLLVIEESANTYVPAGIWPHGTRDVT
HLGSAVQKCLICRAGNTQPGKTDQTILITWPIELNGRLHGAVALEVTQRPAAALQKINQQLSWGMGWFESHFWRQKSTDD
SRQLERAAIALDVAALAGEHPKLEDASLAIANELCKRLACTRIAIGMERKNQVHLIALSNSAWFEKKSQFVTEIENAMDE
ALDQRKTIAYPPIEGLTKGIAVANKDIAKTGSVLSIVLWSAGRGVGVITLERAETRFMLADVELCQATASLIGPILDMKE
DATHWIAGRSAQQLRAAAQALVDPRRPSFRYAAAFLLAFLIFISVFEAEYRVPAKAVLEGEVQRAVVAPFEGYIAQAYIR
AGQTVKHGQLLAKLDDRDLLVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAEAQLTLVEEKLARTAIRAPFD
GIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVILKVDERDIRDVAAGQKGTIVLSGLSAESMPLEVINISIAEAEEGHN
YFRVEAKLQHAPPRLRPGMEGVGKISVGERTLIWIWTHRFIDWLRMLSWNWLP

Specific function: Unknown

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67781; Mature: 67649

Theoretical pI: Translated: 7.10; Mature: 7.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQPASNAETSTPGISAESKDQVTLYGVSSGYRTGQGPSQAWLGRLCGMLDGVETGLLVI
CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
EESANTYVPAGIWPHGTRDVTHLGSAVQKCLICRAGNTQPGKTDQTILITWPIELNGRLH
ECCCCCEECCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEECCEEE
GAVALEVTQRPAAALQKINQQLSWGMGWFESHFWRQKSTDDSRQLERAAIALDVAALAGE
EEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
HPKLEDASLAIANELCKRLACTRIAIGMERKNQVHLIALSNSAWFEKKSQFVTEIENAMD
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
EALDQRKTIAYPPIEGLTKGIAVANKDIAKTGSVLSIVLWSAGRGVGVITLERAETRFML
HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCEEEE
ADVELCQATASLIGPILDMKEDATHWIAGRSAQQLRAAAQALVDPRRPSFRYAAAFLLAF
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LIFISVFEAEYRVPAKAVLEGEVQRAVVAPFEGYIAQAYIRAGQTVKHGQLLAKLDDRDL
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHEEECCCHHH
LVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAEAQLTLVEEKLARTAIRAPF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVILKVDERDIRDVAAGQKGTIVLSGLS
CCEEEECCHHHHCCCCHHCCCEEEEECCCCEEEEEEEECCHHHHHHHCCCCCEEEEECCC
AESMPLEVINISIAEAEEGHNYFRVEAKLQHAPPRLRPGMEGVGKISVGERTLIWIWTHR
CCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEHHH
FIDWLRMLSWNWLP
HHHHHHHHCCCCCC
>Mature Secondary Structure 
TQPASNAETSTPGISAESKDQVTLYGVSSGYRTGQGPSQAWLGRLCGMLDGVETGLLVI
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCCCEEEE
EESANTYVPAGIWPHGTRDVTHLGSAVQKCLICRAGNTQPGKTDQTILITWPIELNGRLH
ECCCCCEECCCCCCCCCCHHHHHHHHHHHHHEEECCCCCCCCCCCEEEEEEEEEECCEEE
GAVALEVTQRPAAALQKINQQLSWGMGWFESHFWRQKSTDDSRQLERAAIALDVAALAGE
EEEEEEECCCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCC
HPKLEDASLAIANELCKRLACTRIAIGMERKNQVHLIALSNSAWFEKKSQFVTEIENAMD
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
EALDQRKTIAYPPIEGLTKGIAVANKDIAKTGSVLSIVLWSAGRGVGVITLERAETRFML
HHHHHCCCCCCCCHHHHHHHHHHCCCCHHHCCCEEEEEEECCCCCEEEEEEECCCCEEEE
ADVELCQATASLIGPILDMKEDATHWIAGRSAQQLRAAAQALVDPRRPSFRYAAAFLLAF
HHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
LIFISVFEAEYRVPAKAVLEGEVQRAVVAPFEGYIAQAYIRAGQTVKHGQLLAKLDDRDL
HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCHHEEECCCHHH
LVERQKWLSEFEQNDRKYRDALAKRDRPQVRILVAQVAQAEAQLTLVEEKLARTAIRAPF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DGIVVTGDLSQMFGSPVERGKLLFEVAPLDAYRVILKVDERDIRDVAAGQKGTIVLSGLS
CCEEEECCHHHHCCCCHHCCCEEEEECCCCEEEEEEEECCHHHHHHHCCCCCEEEEECCC
AESMPLEVINISIAEAEEGHNYFRVEAKLQHAPPRLRPGMEGVGKISVGERTLIWIWTHR
CCCCCEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCCCCCCCEEECCCEEEEEEEHHH
FIDWLRMLSWNWLP
HHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA