| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
Click here to switch to the map view.
The map label for this gene is 82702023
Identifier: 82702023
GI number: 82702023
Start: 1015334
End: 1017901
Strand: Reverse
Name: 82702023
Synonym: Nmul_A0894
Alternate gene names: NA
Gene position: 1017901-1015334 (Counterclockwise)
Preceding gene: 82702024
Following gene: 82702022
Centisome position: 31.97
GC content: 58.14
Gene sequence:
>2568_bases ATGAGGTGGCGCAACAGGAGCATACTCGCTCGTTGGCTGCTATCGGGGGAATGGCAGGCTCATAAGGTTCAGTCAGGCGT CGCCGTGATCGCAATCGCGCTCGGGGTGGCGCTCGGGTTTGCCATCCACCTCATCAATACTGCCGCCTTCAACGAATTTT CCGCCGCCGCGCGCAGCCTTTCCGGCGAGTCGGATCTTGAAGTGCGTGGCCCGCAGGCCACAATCGACGAATCGATTTAT CCACTGCTGGCAGAGCAAGAGGATGTCGAGCTGGCAAATCCCGTACTGGAACTCGACGTTTCCCTCCCCAACCATTCTAG GGAGCGCAAAGACGCCACCCTGAAAATTCTCGGGCTGGATATTTTTCGTGCCTCGGTCATGGCGCCCGACCTGATTGGGA TTCCGGCAGAAGACAAGCTGTTCGATGTCCTCGCGGATGACGCCATTTTCCTCTCTCCTGCCGCCATGGAATGGCTGGGG GTAAAGCAAGGCGACATCCTGAACCTGAGTGTAGGCACCCAGACAGTCGCACTGCGGGTTGCCGGGGGATTGCGCAGGGC GCGGGCGGGACAGCGCATTGGCGTAATGGATATTGCCACGGCGCAATGGCGGTTTCATCGTCTCGGCCAGTTATCGCGCG TCGAGTTGAAACTGCTTCCCGGCACTGATAAAGCTGCATTCAAGGCGCAACTCGAGCAGGAACTGGAGCCCCAGAACCAA TACCTCGTTGCCGAACCCACCACCGGGGAAACCCGGGTGGCAAACATGTCGCGTGCCTATCGGGTAAACCTGAACGTGCT TGCGATGGTAGCGCTGTTTACCGGCACCTTTCTGGTATTCTCCACCCAGGCGCTATCCATTGTCCGGCGAAGACACCAGT TCGCCCTGTTGCGGGTGCTCGGCGTTACGCGCAAACAAATGCTGGGACAGGTTTTATGGGAGGGCGCCATTCTTGGCTTC ATCGGGTCGCTGCTCGGCCTTGCTCTCGGATATGCTACAGCCACCAGCGCGCTGCATTATTTTGGCGGAGACCTCGGAGG GGGGTTTTTCCCTGGAATAAAACCCGTCATGCATTTTGACCCCGTGGCAGCAATGGTCTTTTTCATTCTGGGGGTGGGCA TTACCTTGCTTGGCAGTGCCGCTCCTGCCTGGGAAGCAGCCACGGCTCTTCCAGCGCCCGCATTGAAATCCGGCAGCGAA GATACGGCCCTTGCCAGGCTGGGGAATCCGTGGCCGGGATTGCTTTTCCTTGCTTCGGGCATCCTCTTTACCCGATTGCC GCCGATTTTCGATTTACCGATTTTCGGTTATCTTGCCGTAGCGCAACTGCTGACGGGCGGCATTATTCTCATGCCACCCC TTTCTGCACTCATTTTCACTGTCGTATTCCGTATGGCGCAGCACGCGGGCCGTGCGAGGCCGGTGCTGACTACGGCACTG GCGCGGCTCGCCAATGCCCCCAATCAAGCCGCGATCGCGCTTGGCGGCATATTGGCAAGCTTTACCCTGATGGTCGCCAT GGCGATCATGGTTGCAAGTTTTCGCGTATCGGTCGATGACTGGTTGAGGCATATCCTGCCTGCCGATCTGTATGTCGAAA CCGCAGCGAGCGGAGATACGCGGGGCCTAACCCCGGATGAGATGAAAGCACTGGCGGAAACGCCGGGTCTCGTGCGAGTG GACTTTTTCCGCTCCTCCAAGCTGATGCTCGATCCTAGCCGGCCCAATATCACGCTGATCGCGCGTCCCATCGATATATC CGAGCCCGGCAATACGTTGCCGCTGACAGGCGAATCGATTCCGGTCGCCCAGCTTCCGAAAGGTGCAATTCCGATCTGGG TTTCCGAACCCATGGTGGATTTATACGGTTATACGCTTGGCAAGCACGTCACGCTACCCATCGCTATTCCCGCACGCACG TTTATCGTGACAGGAGTATGGCGTGACTATGGGCGGCAATTCGGCGCGATACAGATGCGCTTGGCGGATTATCAGGCCCT GACGGATGATCGGCTCGTGAATGATGCCGCCCTTTGGCTGGAGCAAGGGGTGGCGCCGGAACAGGTAATCGAGTCGATGA GGCAGCTCCCGTTTGGCAATGCGCTGAAGTTTTCCGATCCGGGTCAGATACGCGCGCTGAGCCTGAATATTTTTGACCGC AGCTTTGCCGTAACCTATCTGCTTGAAGGTGTGGCAATAATCATTGGCCTGCTCGGTGTTGCGGCCAGCTTCTCGGCGCA GGCCCTGGGGCGCATCAAAGAATTTGGAATGCTGCGCCACATCGGCATGACACGGCGCCAGATACTTGGCATGCTGGCAA TAGAAGGAGGTCTGCTGACAGCGCTCGGCGTTGTGCTCGGCTTTGTGCTTGGAGGATGTATCAGCCTGATCCTGGTTTTT ATCGTGAACCCCCAATCGTTCCACTGGACCATGCAATTGAGTCTCCCCTGGGAGAGTCTCTTGAGCGTGGCGCTGACACT GATGTTTCTGGCTGCATTCACGGCAGTGGCATCGGGGCGCCACGCCGTTTCGGGCAATGCAGTACGCGCCGTAAGGGAGG ACTGGTAA
Upstream 100 bases:
>100_bases ATGCCGCCGCGGCAACGGCAGACCGCGTTCTCGTGCTGACAAAGGATGGGCTGCATCCCTTTGTGGCGGAAAAGGCTACG GACTTGCCGAAGCAAATAAA
Downstream 100 bases:
>100_bases TGCGAGTCGTAAAGCGTAATCCCGGATATTTCACCCGTTCCCGCAAACAAAGGTGGCACGATGCCGGATTCAAACGGCTG ACTGGAACCGCTTTCCTTGT
Product: hypothetical protein
Products: NA
Alternate protein names: ABC Transporter Permease Protein; ABC Transporter Integral Membrane Protein; ABC-Type Transporter Permease Protein; Efflux ABC Transporter Permease Protein; Permease; ABC Transporter Membrane Protein; Abc Transporter Permease Protein; Lipoprotein Releasing System LolE Permease Component; ABC-Type Transport System Permease Component
Number of amino acids: Translated: 855; Mature: 855
Protein sequence:
>855_residues MRWRNRSILARWLLSGEWQAHKVQSGVAVIAIALGVALGFAIHLINTAAFNEFSAAARSLSGESDLEVRGPQATIDESIY PLLAEQEDVELANPVLELDVSLPNHSRERKDATLKILGLDIFRASVMAPDLIGIPAEDKLFDVLADDAIFLSPAAMEWLG VKQGDILNLSVGTQTVALRVAGGLRRARAGQRIGVMDIATAQWRFHRLGQLSRVELKLLPGTDKAAFKAQLEQELEPQNQ YLVAEPTTGETRVANMSRAYRVNLNVLAMVALFTGTFLVFSTQALSIVRRRHQFALLRVLGVTRKQMLGQVLWEGAILGF IGSLLGLALGYATATSALHYFGGDLGGGFFPGIKPVMHFDPVAAMVFFILGVGITLLGSAAPAWEAATALPAPALKSGSE DTALARLGNPWPGLLFLASGILFTRLPPIFDLPIFGYLAVAQLLTGGIILMPPLSALIFTVVFRMAQHAGRARPVLTTAL ARLANAPNQAAIALGGILASFTLMVAMAIMVASFRVSVDDWLRHILPADLYVETAASGDTRGLTPDEMKALAETPGLVRV DFFRSSKLMLDPSRPNITLIARPIDISEPGNTLPLTGESIPVAQLPKGAIPIWVSEPMVDLYGYTLGKHVTLPIAIPART FIVTGVWRDYGRQFGAIQMRLADYQALTDDRLVNDAALWLEQGVAPEQVIESMRQLPFGNALKFSDPGQIRALSLNIFDR SFAVTYLLEGVAIIIGLLGVAASFSAQALGRIKEFGMLRHIGMTRRQILGMLAIEGGLLTALGVVLGFVLGGCISLILVF IVNPQSFHWTMQLSLPWESLLSVALTLMFLAAFTAVASGRHAVSGNAVRAVREDW
Sequences:
>Translated_855_residues MRWRNRSILARWLLSGEWQAHKVQSGVAVIAIALGVALGFAIHLINTAAFNEFSAAARSLSGESDLEVRGPQATIDESIY PLLAEQEDVELANPVLELDVSLPNHSRERKDATLKILGLDIFRASVMAPDLIGIPAEDKLFDVLADDAIFLSPAAMEWLG VKQGDILNLSVGTQTVALRVAGGLRRARAGQRIGVMDIATAQWRFHRLGQLSRVELKLLPGTDKAAFKAQLEQELEPQNQ YLVAEPTTGETRVANMSRAYRVNLNVLAMVALFTGTFLVFSTQALSIVRRRHQFALLRVLGVTRKQMLGQVLWEGAILGF IGSLLGLALGYATATSALHYFGGDLGGGFFPGIKPVMHFDPVAAMVFFILGVGITLLGSAAPAWEAATALPAPALKSGSE DTALARLGNPWPGLLFLASGILFTRLPPIFDLPIFGYLAVAQLLTGGIILMPPLSALIFTVVFRMAQHAGRARPVLTTAL ARLANAPNQAAIALGGILASFTLMVAMAIMVASFRVSVDDWLRHILPADLYVETAASGDTRGLTPDEMKALAETPGLVRV DFFRSSKLMLDPSRPNITLIARPIDISEPGNTLPLTGESIPVAQLPKGAIPIWVSEPMVDLYGYTLGKHVTLPIAIPART FIVTGVWRDYGRQFGAIQMRLADYQALTDDRLVNDAALWLEQGVAPEQVIESMRQLPFGNALKFSDPGQIRALSLNIFDR SFAVTYLLEGVAIIIGLLGVAASFSAQALGRIKEFGMLRHIGMTRRQILGMLAIEGGLLTALGVVLGFVLGGCISLILVF IVNPQSFHWTMQLSLPWESLLSVALTLMFLAAFTAVASGRHAVSGNAVRAVREDW >Mature_855_residues MRWRNRSILARWLLSGEWQAHKVQSGVAVIAIALGVALGFAIHLINTAAFNEFSAAARSLSGESDLEVRGPQATIDESIY PLLAEQEDVELANPVLELDVSLPNHSRERKDATLKILGLDIFRASVMAPDLIGIPAEDKLFDVLADDAIFLSPAAMEWLG VKQGDILNLSVGTQTVALRVAGGLRRARAGQRIGVMDIATAQWRFHRLGQLSRVELKLLPGTDKAAFKAQLEQELEPQNQ YLVAEPTTGETRVANMSRAYRVNLNVLAMVALFTGTFLVFSTQALSIVRRRHQFALLRVLGVTRKQMLGQVLWEGAILGF IGSLLGLALGYATATSALHYFGGDLGGGFFPGIKPVMHFDPVAAMVFFILGVGITLLGSAAPAWEAATALPAPALKSGSE DTALARLGNPWPGLLFLASGILFTRLPPIFDLPIFGYLAVAQLLTGGIILMPPLSALIFTVVFRMAQHAGRARPVLTTAL ARLANAPNQAAIALGGILASFTLMVAMAIMVASFRVSVDDWLRHILPADLYVETAASGDTRGLTPDEMKALAETPGLVRV DFFRSSKLMLDPSRPNITLIARPIDISEPGNTLPLTGESIPVAQLPKGAIPIWVSEPMVDLYGYTLGKHVTLPIAIPART FIVTGVWRDYGRQFGAIQMRLADYQALTDDRLVNDAALWLEQGVAPEQVIESMRQLPFGNALKFSDPGQIRALSLNIFDR SFAVTYLLEGVAIIIGLLGVAASFSAQALGRIKEFGMLRHIGMTRRQILGMLAIEGGLLTALGVVLGFVLGGCISLILVF IVNPQSFHWTMQLSLPWESLLSVALTLMFLAAFTAVASGRHAVSGNAVRAVREDW
Specific function: Unknown
COG id: COG0577
COG function: function code V; ABC-type antimicrobial peptide transport system, permease component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 92259; Mature: 92259
Theoretical pI: Translated: 7.92; Mature: 7.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRWRNRSILARWLLSGEWQAHKVQSGVAVIAIALGVALGFAIHLINTAAFNEFSAAARSL CCCCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGESDLEVRGPQATIDESIYPLLAEQEDVELANPVLELDVSLPNHSRERKDATLKILGLD CCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCCCCCCCCCEEEEEEHH IFRASVMAPDLIGIPAEDKLFDVLADDAIFLSPAAMEWLGVKQGDILNLSVGTQTVALRV HHHHHHCCCCCCCCCCCHHHHHHHHCCCEEECHHHHHHHCCCCCCEEEEECCCEEEEEEH AGGLRRARAGQRIGVMDIATAQWRFHRLGQLSRVELKLLPGTDKAAFKAQLEQELEPQNQ HHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC YLVAEPTTGETRVANMSRAYRVNLNVLAMVALFTGTFLVFSTQALSIVRRRHQFALLRVL EEEECCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVTRKQMLGQVLWEGAILGFIGSLLGLALGYATATSALHYFGGDLGGGFFPGIKPVMHFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC PVAAMVFFILGVGITLLGSAAPAWEAATALPAPALKSGSEDTALARLGNPWPGLLFLASG HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHHH ILFTRLPPIFDLPIFGYLAVAQLLTGGIILMPPLSALIFTVVFRMAQHAGRARPVLTTAL HHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHH ARLANAPNQAAIALGGILASFTLMVAMAIMVASFRVSVDDWLRHILPADLYVETAASGDT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCC RGLTPDEMKALAETPGLVRVDFFRSSKLMLDPSRPNITLIARPIDISEPGNTLPLTGESI CCCCHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCC PVAQLPKGAIPIWVSEPMVDLYGYTLGKHVTLPIAIPARTFIVTGVWRDYGRQFGAIQMR CHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCHHHHEEHHHHHHCCCCCCEEEE LADYQALTDDRLVNDAALWLEQGVAPEQVIESMRQLPFGNALKFSDPGQIRALSLNIFDR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHH SFAVTYLLEGVAIIIGLLGVAASFSAQALGRIKEFGMLRHIGMTRRQILGMLAIEGGLLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALGVVLGFVLGGCISLILVFIVNPQSFHWTMQLSLPWESLLSVALTLMFLAAFTAVASGR HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC HAVSGNAVRAVREDW CCCCCCHHHHHHCCC >Mature Secondary Structure MRWRNRSILARWLLSGEWQAHKVQSGVAVIAIALGVALGFAIHLINTAAFNEFSAAARSL CCCCCHHHHHHHHHCCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC SGESDLEVRGPQATIDESIYPLLAEQEDVELANPVLELDVSLPNHSRERKDATLKILGLD CCCCCCEEECCCCHHHHHHHHHHCCCCCCHHHCCEEEEEECCCCCCCCCCCCEEEEEEHH IFRASVMAPDLIGIPAEDKLFDVLADDAIFLSPAAMEWLGVKQGDILNLSVGTQTVALRV HHHHHHCCCCCCCCCCCHHHHHHHHCCCEEECHHHHHHHCCCCCCEEEEECCCEEEEEEH AGGLRRARAGQRIGVMDIATAQWRFHRLGQLSRVELKLLPGTDKAAFKAQLEQELEPQNQ HHHHHHHHCCCCCCEEEEHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHCCCCCC YLVAEPTTGETRVANMSRAYRVNLNVLAMVALFTGTFLVFSTQALSIVRRRHQFALLRVL EEEECCCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GVTRKQMLGQVLWEGAILGFIGSLLGLALGYATATSALHYFGGDLGGGFFPGIKPVMHFD HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCC PVAAMVFFILGVGITLLGSAAPAWEAATALPAPALKSGSEDTALARLGNPWPGLLFLASG HHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHCCCCCCHHHHHCCCCCCHHHHHHHH ILFTRLPPIFDLPIFGYLAVAQLLTGGIILMPPLSALIFTVVFRMAQHAGRARPVLTTAL HHHHCCCCCCCCHHHHHHHHHHHHHCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHH ARLANAPNQAAIALGGILASFTLMVAMAIMVASFRVSVDDWLRHILPADLYVETAASGDT HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCEEEECCCCCC RGLTPDEMKALAETPGLVRVDFFRSSKLMLDPSRPNITLIARPIDISEPGNTLPLTGESI CCCCHHHHHHHHCCCCEEEEEEECCCCEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCC PVAQLPKGAIPIWVSEPMVDLYGYTLGKHVTLPIAIPARTFIVTGVWRDYGRQFGAIQMR CHHHCCCCCEEEEECCCHHHHHHHHCCCEEEEEEEECCHHHHEEHHHHHHCCCCCCEEEE LADYQALTDDRLVNDAALWLEQGVAPEQVIESMRQLPFGNALKFSDPGQIRALSLNIFDR HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEHHH SFAVTYLLEGVAIIIGLLGVAASFSAQALGRIKEFGMLRHIGMTRRQILGMLAIEGGLLT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH ALGVVLGFVLGGCISLILVFIVNPQSFHWTMQLSLPWESLLSVALTLMFLAAFTAVASGR HHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCC HAVSGNAVRAVREDW CCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA