| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is 82702001
Identifier: 82702001
GI number: 82702001
Start: 990746
End: 992275
Strand: Reverse
Name: 82702001
Synonym: Nmul_A0872
Alternate gene names: NA
Gene position: 992275-990746 (Counterclockwise)
Preceding gene: 82702002
Following gene: 82701999
Centisome position: 31.16
GC content: 55.62
Gene sequence:
>1530_bases ATGGATCCGAACGAAAGCAAAAAATGGGACATGCACTGGTACGATTGGCTGGTATTTGCGGTACCGACGATCTTCATCGC GAGCCTGGGACTGGAATCCGCGTTTGGGACAACGCCGGGGCCCGGTACAGCTGCGTACCGTGATTTCCGCGCAGTTGCGC ACTGGTTTGATCCGGTCTTCTTCCAGTACAACCTTGTCATGACGCTGCTGGCGGTTCTGGTTGTGCCATCGCTCGCCTTA AGCTACATGATGAAGATGGCGAACCGCAAGGAACGGCGTTTATACCGCGACGTTCCACCTGAGCGGCGCGGCGAAATCCG TCAGCGGATGGGACGACGGGCTTCCTTTGGCACTTACAGGGGAAGCGTCTGCCTGACCACGGTCGTCGTGCTGCTCGGTA GTTCCATTCTGCTGCTGTTCAAGCCCGTTTCCTCGTCTGCGGAACTTGGGGTGGATTTCAGTCTCGGGGCGAACATGTTG ATGATGGGCCCCTTCATGGAACTGTATGAAACGGGTAATGGTTCCTATTATTCCCACCTGGTCCGCAACCTGACGGCTTT CCAGTTCGGATTCCTTGGCGCTTACGTCTATTTCATCGGCTCTGTCGTCCGTGCCTACTTCACCATGGACCTGACTTCCA ATACGTTCGTCGATGGCGCTATCCGCATGATCGTCGCAAGCCTGCTGGCGCTGGTGCTCTCCTTTGCGTTCGATCTGCTG CTGCCACACGAACTCGATGTGAATGTGTCCTCAACTGCCCCCTCAACCGCTGCGCCCTCCGACGTGAATGCCACGACACC CGCGCTCCCCCCACCCTCAACGCCTTCTACCGGTGAGGAATCCGGAGAAACCACATCTCCTGAAAGATCAGGCAATAGCG AAAAACTCCTTTCGAAACAGGAAGTCCCGTTGCCTGCCAGATTGAGCCTCCTGCCTCTTGTTGCTTTCTTTCTCGGTTTC TATCCGAAACGGACTGCACTCGGAATTGAGCGGATCGTCATTAAACTGACCAGAGGAATCATTCCCACCATGAGCTACCG CGCGCTGCCGCTTTCCATGCTGGCAGGAATGAGCTACTCGCACGAATTGAGACTGGAGCGGGAAGGGTTCGATAATATCG AAAACCTCAGCAATGCTGACCCTGTGGATCTCGCGATACGCACCTGCTTCAGCTATAGCCAGTTGAAGCAATGGATCGAT CAGGCATGGCTGGCTTCTCATCTGCGCGAAGATTATCCCGGCTTCGCGCAGCGGACAGGCATCACGAACAGTGAGGAACT TCGCTGTTTCTTCTCCACCTGCGACACCTCCCATACCGACGGAGTGGAACAATTGCTAGCCGCCCTGTCAGCAGACCCGG CAACCGTCGCTTCGTGGAGATTGAGGCTCAATACTCTCCGGATACTGCTGGATACAAACTCTTCCCGGCAGGGGAGCGGT CACGACTTCACCGAAAGGGAACTCACCCCGCCTCAAGTTACACATCCGGAAGCAGCAACCAGCTCACCTAAATCACAAAC AGATCGATAA
Upstream 100 bases:
>100_bases AGGCAATCCGCACGGCCTTTCAATCATCGCCAATTCTGGATCGAGGCTGCGCATCAAGCAATCGCTGCGGCAGAAGGTAA GGAAAGTTGAAAAGACGTGT
Downstream 100 bases:
>100_bases ACTCGTGAACCGGCATTGCTTCCAGCCTGCCTTGATCATGACAGGCATTCATGATTGCCTCGCACTGCTGGGCGGGGAAA CGCCGCCCAAGATTGATTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 509; Mature: 509
Protein sequence:
>509_residues MDPNESKKWDMHWYDWLVFAVPTIFIASLGLESAFGTTPGPGTAAYRDFRAVAHWFDPVFFQYNLVMTLLAVLVVPSLAL SYMMKMANRKERRLYRDVPPERRGEIRQRMGRRASFGTYRGSVCLTTVVVLLGSSILLLFKPVSSSAELGVDFSLGANML MMGPFMELYETGNGSYYSHLVRNLTAFQFGFLGAYVYFIGSVVRAYFTMDLTSNTFVDGAIRMIVASLLALVLSFAFDLL LPHELDVNVSSTAPSTAAPSDVNATTPALPPPSTPSTGEESGETTSPERSGNSEKLLSKQEVPLPARLSLLPLVAFFLGF YPKRTALGIERIVIKLTRGIIPTMSYRALPLSMLAGMSYSHELRLEREGFDNIENLSNADPVDLAIRTCFSYSQLKQWID QAWLASHLREDYPGFAQRTGITNSEELRCFFSTCDTSHTDGVEQLLAALSADPATVASWRLRLNTLRILLDTNSSRQGSG HDFTERELTPPQVTHPEAATSSPKSQTDR
Sequences:
>Translated_509_residues MDPNESKKWDMHWYDWLVFAVPTIFIASLGLESAFGTTPGPGTAAYRDFRAVAHWFDPVFFQYNLVMTLLAVLVVPSLAL SYMMKMANRKERRLYRDVPPERRGEIRQRMGRRASFGTYRGSVCLTTVVVLLGSSILLLFKPVSSSAELGVDFSLGANML MMGPFMELYETGNGSYYSHLVRNLTAFQFGFLGAYVYFIGSVVRAYFTMDLTSNTFVDGAIRMIVASLLALVLSFAFDLL LPHELDVNVSSTAPSTAAPSDVNATTPALPPPSTPSTGEESGETTSPERSGNSEKLLSKQEVPLPARLSLLPLVAFFLGF YPKRTALGIERIVIKLTRGIIPTMSYRALPLSMLAGMSYSHELRLEREGFDNIENLSNADPVDLAIRTCFSYSQLKQWID QAWLASHLREDYPGFAQRTGITNSEELRCFFSTCDTSHTDGVEQLLAALSADPATVASWRLRLNTLRILLDTNSSRQGSG HDFTERELTPPQVTHPEAATSSPKSQTDR >Mature_509_residues MDPNESKKWDMHWYDWLVFAVPTIFIASLGLESAFGTTPGPGTAAYRDFRAVAHWFDPVFFQYNLVMTLLAVLVVPSLAL SYMMKMANRKERRLYRDVPPERRGEIRQRMGRRASFGTYRGSVCLTTVVVLLGSSILLLFKPVSSSAELGVDFSLGANML MMGPFMELYETGNGSYYSHLVRNLTAFQFGFLGAYVYFIGSVVRAYFTMDLTSNTFVDGAIRMIVASLLALVLSFAFDLL LPHELDVNVSSTAPSTAAPSDVNATTPALPPPSTPSTGEESGETTSPERSGNSEKLLSKQEVPLPARLSLLPLVAFFLGF YPKRTALGIERIVIKLTRGIIPTMSYRALPLSMLAGMSYSHELRLEREGFDNIENLSNADPVDLAIRTCFSYSQLKQWID QAWLASHLREDYPGFAQRTGITNSEELRCFFSTCDTSHTDGVEQLLAALSADPATVASWRLRLNTLRILLDTNSSRQGSG HDFTERELTPPQVTHPEAATSSPKSQTDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 56462; Mature: 56462
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDPNESKKWDMHWYDWLVFAVPTIFIASLGLESAFGTTPGPGTAAYRDFRAVAHWFDPVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FQYNLVMTLLAVLVVPSLALSYMMKMANRKERRLYRDVPPERRGEIRQRMGRRASFGTYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC GSVCLTTVVVLLGSSILLLFKPVSSSAELGVDFSLGANMLMMGPFMELYETGNGSYYSHL CHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHCCCCHHHHHHHHHHHHCCCCHHHHHH VRNLTAFQFGFLGAYVYFIGSVVRAYFTMDLTSNTFVDGAIRMIVASLLALVLSFAFDLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPHELDVNVSSTAPSTAAPSDVNATTPALPPPSTPSTGEESGETTSPERSGNSEKLLSKQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC EVPLPARLSLLPLVAFFLGFYPKRTALGIERIVIKLTRGIIPTMSYRALPLSMLAGMSYS CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC HELRLEREGFDNIENLSNADPVDLAIRTCFSYSQLKQWIDQAWLASHLREDYPGFAQRTG HHEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC ITNSEELRCFFSTCDTSHTDGVEQLLAALSADPATVASWRLRLNTLRILLDTNSSRQGSG CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEECCCCCCCCC HDFTERELTPPQVTHPEAATSSPKSQTDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MDPNESKKWDMHWYDWLVFAVPTIFIASLGLESAFGTTPGPGTAAYRDFRAVAHWFDPVF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHH FQYNLVMTLLAVLVVPSLALSYMMKMANRKERRLYRDVPPERRGEIRQRMGRRASFGTYR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCC GSVCLTTVVVLLGSSILLLFKPVSSSAELGVDFSLGANMLMMGPFMELYETGNGSYYSHL CHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEHHCCCCHHHHHHHHHHHHCCCCHHHHHH VRNLTAFQFGFLGAYVYFIGSVVRAYFTMDLTSNTFVDGAIRMIVASLLALVLSFAFDLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LPHELDVNVSSTAPSTAAPSDVNATTPALPPPSTPSTGEESGETTSPERSGNSEKLLSKQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCC EVPLPARLSLLPLVAFFLGFYPKRTALGIERIVIKLTRGIIPTMSYRALPLSMLAGMSYS CCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCC HELRLEREGFDNIENLSNADPVDLAIRTCFSYSQLKQWIDQAWLASHLREDYPGFAQRTG HHEEECCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCC ITNSEELRCFFSTCDTSHTDGVEQLLAALSADPATVASWRLRLNTLRILLDTNSSRQGSG CCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHEEEEEEEECCCCCCCCC HDFTERELTPPQVTHPEAATSSPKSQTDR CCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA