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The map label for this gene is bepD [H]

Identifier: 82701825

GI number: 82701825

Start: 798903

End: 800141

Strand: Reverse

Name: bepD [H]

Synonym: Nmul_A0692

Alternate gene names: 82701825

Gene position: 800141-798903 (Counterclockwise)

Preceding gene: 82701844

Following gene: 82701824

Centisome position: 25.13

GC content: 56.74

Gene sequence:

>1239_bases
ATGACAGCCATCCAGGATTATAAAAACAAACCCGGCAACTCGTTAATGTGCAGCCAAATAAAAATGCCTGACTTACTGTA
TGCTACCGCGCGGCTCGCCCTAAGCGTTGCTGCAAGCGTCGCCTTGGGCGTTATGGTGTCGAGCTGTGGCAAGAAGCCAG
AAACACCTCCTCCCCCCGCCCTTCCCGTAAGTGTAATCGAGGTTCACCCTACCAGCGTACCGATCAGTGCCGAAGCCGTG
GCCCAGACCGAAGGCGCCAAGGAGGTCGAAATACGTCCCCGGGTGGGGGGCATTCTGCTCAAACGCCTGTATGAGGAAGG
TGCAGAGGTAAAAGCAGGTCAACCTCTGTTTCTGATTGATCCCGTACCTTACCGATATGCGCTTGCGCAGGCGAAGGCCC
AACTGGCAGAACAGAAAGCCCGTATCATTCAGACCGGACGCGAAGAAAAACGCCTGAAAGACCTGCTGGAGACGCAGGCA
ATCAGTCAGCGCGAGTATGATAACGCGGTCTCCGATAACGCGATTGCGCACGCCGCCTTGCAGCAGGCCGAAGTGCGCGT
GCGCGACGCCGAACTCAGCCTCTCCTATACCTCTGTAACCGCGCCTGTCAACGGTATTTCGGGCCGCTTCCAGTTTTCGG
AAGGCGCCCTGGTGGAAGCGAACAGCAGCCTTTTGACCACGCTGGTGCAATTGTCGCCGATCTGGGTGCGTTTCAGCCTG
TCGAATAACGAACTGATGCAGCTCGGCGGCCCCCTGAACGAGAAAAAAGTAAAACAAGTGACCCTGATATTGCCGGACGG
CTCAGAATACGAAAAGAAAGGGGAGTTGAATTTCGCCGCCAGCCAGATCGACCCGCTGCTGGGCACGCAGCAACTGCGCG
CCACGTTCGAAAATGCGGAACAGCGATTGCTGCCGGGTCAGTTTGTCAGAGCGAAAGTGGTCGTTGGCCAGCGTGACGGG
GTATTTCTCGTCCCTCAGAATGCAATACAAACCTCTGACCGCGGTCAGTCAGTGTATGTGATCAATGAGAAAAACGAAGC
GACTCCGCAGGCAGTGGTTACCGGGAAGTGGATGGGTACGGACTGGGTAATTCTTGACGGACTCAAAGCCGGGGATAAAG
TCATTGTCGATAATATCATCAAGCTTCGCCCCGGGGCGCCCGTTACCCCTCACGCGCCCGGAGAAACGCCGGGAACACCT
CCTGCCCAGCCTGATTCCGGCTCCGGCAAAGCCGCTTGA

Upstream 100 bases:

>100_bases
GCCATGTACGAATCGCTCTTTACATCTGTGAAGGTTGGTTTATAATTTACATACATACACGTATGTATGCAAGTTCCAAA
TTTAGCTGCACGGAGCATGA

Downstream 100 bases:

>100_bases
GCAAAAAACCGGGCGGACAACCGCCGGATAAATCATGACCAGATTTTTTATTCTGCGACCGATATTTGCGTCGGTTATCT
CCATTATCATCGTCCTTGCC

Product: secretion protein HlyD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 411

Protein sequence:

>412_residues
MTAIQDYKNKPGNSLMCSQIKMPDLLYATARLALSVAASVALGVMVSSCGKKPETPPPPALPVSVIEVHPTSVPISAEAV
AQTEGAKEVEIRPRVGGILLKRLYEEGAEVKAGQPLFLIDPVPYRYALAQAKAQLAEQKARIIQTGREEKRLKDLLETQA
ISQREYDNAVSDNAIAHAALQQAEVRVRDAELSLSYTSVTAPVNGISGRFQFSEGALVEANSSLLTTLVQLSPIWVRFSL
SNNELMQLGGPLNEKKVKQVTLILPDGSEYEKKGELNFAASQIDPLLGTQQLRATFENAEQRLLPGQFVRAKVVVGQRDG
VFLVPQNAIQTSDRGQSVYVINEKNEATPQAVVTGKWMGTDWVILDGLKAGDKVIVDNIIKLRPGAPVTPHAPGETPGTP
PAQPDSGSGKAA

Sequences:

>Translated_412_residues
MTAIQDYKNKPGNSLMCSQIKMPDLLYATARLALSVAASVALGVMVSSCGKKPETPPPPALPVSVIEVHPTSVPISAEAV
AQTEGAKEVEIRPRVGGILLKRLYEEGAEVKAGQPLFLIDPVPYRYALAQAKAQLAEQKARIIQTGREEKRLKDLLETQA
ISQREYDNAVSDNAIAHAALQQAEVRVRDAELSLSYTSVTAPVNGISGRFQFSEGALVEANSSLLTTLVQLSPIWVRFSL
SNNELMQLGGPLNEKKVKQVTLILPDGSEYEKKGELNFAASQIDPLLGTQQLRATFENAEQRLLPGQFVRAKVVVGQRDG
VFLVPQNAIQTSDRGQSVYVINEKNEATPQAVVTGKWMGTDWVILDGLKAGDKVIVDNIIKLRPGAPVTPHAPGETPGTP
PAQPDSGSGKAA
>Mature_411_residues
TAIQDYKNKPGNSLMCSQIKMPDLLYATARLALSVAASVALGVMVSSCGKKPETPPPPALPVSVIEVHPTSVPISAEAVA
QTEGAKEVEIRPRVGGILLKRLYEEGAEVKAGQPLFLIDPVPYRYALAQAKAQLAEQKARIIQTGREEKRLKDLLETQAI
SQREYDNAVSDNAIAHAALQQAEVRVRDAELSLSYTSVTAPVNGISGRFQFSEGALVEANSSLLTTLVQLSPIWVRFSLS
NNELMQLGGPLNEKKVKQVTLILPDGSEYEKKGELNFAASQIDPLLGTQQLRATFENAEQRLLPGQFVRAKVVVGQRDGV
FLVPQNAIQTSDRGQSVYVINEKNEATPQAVVTGKWMGTDWVILDGLKAGDKVIVDNIIKLRPGAPVTPHAPGETPGTPP
AQPDSGSGKAA

Specific function: Involved in resistance to several unrelated toxic compounds, such as dyes, detergents and antibiotics [H]

COG id: COG0845

COG function: function code M; Membrane-fusion protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]

Homologues:

Organism=Escherichia coli, GI1789665, Length=365, Percent_Identity=35.6164383561644, Blast_Score=205, Evalue=3e-54,
Organism=Escherichia coli, GI1786668, Length=366, Percent_Identity=34.6994535519126, Blast_Score=197, Evalue=1e-51,
Organism=Escherichia coli, GI1789929, Length=352, Percent_Identity=33.8068181818182, Blast_Score=188, Evalue=6e-49,
Organism=Escherichia coli, GI87082036, Length=345, Percent_Identity=30.1449275362319, Blast_Score=145, Evalue=5e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006143 [H]

Pfam domain/function: PF00529 HlyD [H]

EC number: NA

Molecular weight: Translated: 44281; Mature: 44150

Theoretical pI: Translated: 6.81; Mature: 6.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAIQDYKNKPGNSLMCSQIKMPDLLYATARLALSVAASVALGVMVSSCGKKPETPPPPA
CCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LPVSVIEVHPTSVPISAEAVAQTEGAKEVEIRPRVGGILLKRLYEEGAEVKAGQPLFLID
CCEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEC
PVPYRYALAQAKAQLAEQKARIIQTGREEKRLKDLLETQAISQREYDNAVSDNAIAHAAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHH
QQAEVRVRDAELSLSYTSVTAPVNGISGRFQFSEGALVEANSSLLTTLVQLSPIWVRFSL
HHHHHEEEECEEEEEEEEEECCCCCCCCEEEECCCCEEECCHHHHHHHHHCCCEEEEEEE
SNNELMQLGGPLNEKKVKQVTLILPDGSEYEKKGELNFAASQIDPLLGTQQLRATFENAE
CCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHH
QRLLPGQFVRAKVVVGQRDGVFLVPQNAIQTSDRGQSVYVINEKNEATPQAVVTGKWMGT
HHCCCCHHEEEEEEEECCCCEEEEECHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCC
DWVILDGLKAGDKVIVDNIIKLRPGAPVTPHAPGETPGTPPAQPDSGSGKAA
CEEEEECCCCCCEEEECHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TAIQDYKNKPGNSLMCSQIKMPDLLYATARLALSVAASVALGVMVSSCGKKPETPPPPA
CCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LPVSVIEVHPTSVPISAEAVAQTEGAKEVEIRPRVGGILLKRLYEEGAEVKAGQPLFLID
CCEEEEEECCCCCCCCHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCEEEEC
PVPYRYALAQAKAQLAEQKARIIQTGREEKRLKDLLETQAISQREYDNAVSDNAIAHAAL
CCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHH
QQAEVRVRDAELSLSYTSVTAPVNGISGRFQFSEGALVEANSSLLTTLVQLSPIWVRFSL
HHHHHEEEECEEEEEEEEEECCCCCCCCEEEECCCCEEECCHHHHHHHHHCCCEEEEEEE
SNNELMQLGGPLNEKKVKQVTLILPDGSEYEKKGELNFAASQIDPLLGTQQLRATFENAE
CCCCCEECCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEHHHHHHHHCHHHHHHHHHHHH
QRLLPGQFVRAKVVVGQRDGVFLVPQNAIQTSDRGQSVYVINEKNEATPQAVVTGKWMGT
HHCCCCHHEEEEEEEECCCCEEEEECHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCC
DWVILDGLKAGDKVIVDNIIKLRPGAPVTPHAPGETPGTPPAQPDSGSGKAA
CEEEEECCCCCCEEEECHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12271122 [H]