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The map label for this gene is psd

Identifier: 82701814

GI number: 82701814

Start: 780870

End: 781739

Strand: Reverse

Name: psd

Synonym: Nmul_A0681

Alternate gene names: 82701814

Gene position: 781739-780870 (Counterclockwise)

Preceding gene: 82701815

Following gene: 82701805

Centisome position: 24.55

GC content: 53.79

Gene sequence:

>870_bases
ATGCAGACAGCTTCTCTTTCTGTATTTCCTCAGTACTTATTGCCTAAACATGCGCTGACACTGCTGGCCGGACGTATTGC
CAATGCTGAGGCCGGCAATCTCACCACGCTTCTTATCCGTTGGTTTGTCTGGCGCTACGGGGTGAATATGAATGAAGCGA
TTAACCCGGATATTCGCAGCTATCGAACCTTCAACGAGTTTTTTACCCGTCCGCTGCTTCTGGAAAACCGTCCGATATCT
GATGCCGATTATGTTTGTCCAGCCGACGGCGTCATAAGCCAGCTCGGCGTCATTTCCGGCGACCAGATATTTCAGGCCAA
GGGACACAATTATTCCGCCGCCGCGCTGCTGGGAGGGGATACCCGGCTGGCGGAAAAATTCTATGGGGGCAACTTTGCCA
CCCTGTATCTGAGCCCGAGGGATTATCACCGGGTCCACATGCCCGTAGATGCACGCGTGAGCCGAATGATCTATGTTCCG
GGAGATCTGTTCTCCGTGAACGCGAAAACGGTCCGCGGCGTCCCGGGGTTGTTTGCACGCAACGAGAGGGTGATTTGCAT
ATTTGAATCGGAATTCGGGCCATTTGCTTTAGTGCTGGTAGGCGCCACTATTGTCGGGAGTGTAGCCACCGTATGGCATG
GAGTGGTCAACCCGCGGGATTCAGAAGGGGCGCGCGATGTACAGGAGTGGCGATATGACTCTGCGGATCTGGTGCTCAAA
AAAGGGGATGAGATGGGCAGATTCCAATTGGGATCAACAGTGGTAATGTTATTCCCGAAAAACGAAATAGCGTTTAATCC
CGCCTGGGCCCCCGGCCGAACCATACGGTTCGGGGAAACGATGGCGACCAAAGCTGATCCGGCCAAATAA

Upstream 100 bases:

>100_bases
ATTATGACATCTGGTTGACGCGAGTTGGAGTAAACCCGGGTCACGAAGATTGATCGCTTAATACACTATAATAGCCTCTA
TTTCTATCTCAAAAATTGCC

Downstream 100 bases:

>100_bases
AAAGAAAAGAGCATTCCTCATTTCCCTTCATTTCCCTCTTGCTGGCAAAGACGAAGGGCTGCAGGCGGAACTGAAAGAAG
TGCTTTAAGAAGATACGGGA

Product: phosphatidylserine decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 289

Protein sequence:

>289_residues
MQTASLSVFPQYLLPKHALTLLAGRIANAEAGNLTTLLIRWFVWRYGVNMNEAINPDIRSYRTFNEFFTRPLLLENRPIS
DADYVCPADGVISQLGVISGDQIFQAKGHNYSAAALLGGDTRLAEKFYGGNFATLYLSPRDYHRVHMPVDARVSRMIYVP
GDLFSVNAKTVRGVPGLFARNERVICIFESEFGPFALVLVGATIVGSVATVWHGVVNPRDSEGARDVQEWRYDSADLVLK
KGDEMGRFQLGSTVVMLFPKNEIAFNPAWAPGRTIRFGETMATKADPAK

Sequences:

>Translated_289_residues
MQTASLSVFPQYLLPKHALTLLAGRIANAEAGNLTTLLIRWFVWRYGVNMNEAINPDIRSYRTFNEFFTRPLLLENRPIS
DADYVCPADGVISQLGVISGDQIFQAKGHNYSAAALLGGDTRLAEKFYGGNFATLYLSPRDYHRVHMPVDARVSRMIYVP
GDLFSVNAKTVRGVPGLFARNERVICIFESEFGPFALVLVGATIVGSVATVWHGVVNPRDSEGARDVQEWRYDSADLVLK
KGDEMGRFQLGSTVVMLFPKNEIAFNPAWAPGRTIRFGETMATKADPAK
>Mature_289_residues
MQTASLSVFPQYLLPKHALTLLAGRIANAEAGNLTTLLIRWFVWRYGVNMNEAINPDIRSYRTFNEFFTRPLLLENRPIS
DADYVCPADGVISQLGVISGDQIFQAKGHNYSAAALLGGDTRLAEKFYGGNFATLYLSPRDYHRVHMPVDARVSRMIYVP
GDLFSVNAKTVRGVPGLFARNERVICIFESEFGPFALVLVGATIVGSVATVWHGVVNPRDSEGARDVQEWRYDSADLVLK
KGDEMGRFQLGSTVVMLFPKNEIAFNPAWAPGRTIRFGETMATKADPAK

Specific function: Unknown

COG id: COG0688

COG function: function code I; Phosphatidylserine decarboxylase

Gene ontology:

Cell location: Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphatidylserine decarboxylase family. Type 1 subfamily

Homologues:

Organism=Homo sapiens, GI13489112, Length=301, Percent_Identity=32.2259136212625, Blast_Score=137, Evalue=9e-33,
Organism=Escherichia coli, GI1790604, Length=283, Percent_Identity=54.0636042402827, Blast_Score=280, Evalue=7e-77,
Organism=Caenorhabditis elegans, GI71980843, Length=273, Percent_Identity=31.8681318681319, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71980840, Length=272, Percent_Identity=31.25, Blast_Score=115, Evalue=3e-26,
Organism=Saccharomyces cerevisiae, GI6324160, Length=136, Percent_Identity=39.7058823529412, Blast_Score=86, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6321609, Length=235, Percent_Identity=27.2340425531915, Blast_Score=86, Evalue=9e-18,
Organism=Drosophila melanogaster, GI24649526, Length=281, Percent_Identity=33.4519572953737, Blast_Score=120, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24649528, Length=281, Percent_Identity=33.4519572953737, Blast_Score=120, Evalue=9e-28,
Organism=Drosophila melanogaster, GI24649524, Length=281, Percent_Identity=33.4519572953737, Blast_Score=120, Evalue=9e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSD_NITMU (Q2YB83)

Other databases:

- EMBL:   CP000103
- RefSeq:   YP_411380.1
- STRING:   Q2YB83
- GeneID:   3784058
- GenomeReviews:   CP000103_GR
- KEGG:   nmu:Nmul_A0681
- HOGENOM:   HBG302256
- OMA:   MATVWHG
- PhylomeDB:   Q2YB83
- ProtClustDB:   PRK00044
- BioCyc:   NMUL323848:NMUL_A0681-MONOMER
- HAMAP:   MF_00662
- InterPro:   IPR003817
- InterPro:   IPR005221
- PANTHER:   PTHR10067
- TIGRFAMs:   TIGR00163

Pfam domain/function: PF02666 PS_Dcarbxylase

EC number: =4.1.1.65

Molecular weight: Translated: 32038; Mature: 32038

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTASLSVFPQYLLPKHALTLLAGRIANAEAGNLTTLLIRWFVWRYGVNMNEAINPDIRS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
YRTFNEFFTRPLLLENRPISDADYVCPADGVISQLGVISGDQIFQAKGHNYSAAALLGGD
HHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEEECCC
TRLAEKFYGGNFATLYLSPRDYHRVHMPVDARVSRMIYVPGDLFSVNAKTVRGVPGLFAR
HHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEEEEEEECCCEEEECCHHCCCCCCCEEC
NERVICIFESEFGPFALVLVGATIVGSVATVWHGVVNPRDSEGARDVQEWRYDSADLVLK
CCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEE
KGDEMGRFQLGSTVVMLFPKNEIAFNPAWAPGRTIRFGETMATKADPAK
CCCCCCEEEECCEEEEEEECCCEEECCCCCCCCEEEECCHHCCCCCCCC
>Mature Secondary Structure
MQTASLSVFPQYLLPKHALTLLAGRIANAEAGNLTTLLIRWFVWRYGVNMNEAINPDIRS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHH
YRTFNEFFTRPLLLENRPISDADYVCPADGVISQLGVISGDQIFQAKGHNYSAAALLGGD
HHHHHHHHCCCEEECCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCEEEEEECCC
TRLAEKFYGGNFATLYLSPRDYHRVHMPVDARVSRMIYVPGDLFSVNAKTVRGVPGLFAR
HHHHHHHCCCCEEEEEECCCCCEEEECCCCCCEEEEEEECCCEEEECCHHCCCCCCCEEC
NERVICIFESEFGPFALVLVGATIVGSVATVWHGVVNPRDSEGARDVQEWRYDSADLVLK
CCEEEEEEECCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCEEEEE
KGDEMGRFQLGSTVVMLFPKNEIAFNPAWAPGRTIRFGETMATKADPAK
CCCCCCEEEECCEEEEEEECCCEEECCCCCCCCEEEECCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA