Click here to switch to the map view.

The map label for this gene is 82701728

Identifier: 82701728

GI number: 82701728

Start: 678825

End: 678950

Strand: Reverse

Name: 82701728

Synonym: Nmul_A0594

Alternate gene names: NA

Gene position: 678950-678825 (Counterclockwise)

Preceding gene: 82701730

Following gene: 82701727

Centisome position: 21.32

GC content: 52.38

Gene sequence:

>126_bases
TTGGTTGAGGCGGGCAAGCCTACGCAAAACGCGTACATTGAGAGCTTCAATGGCCGGTTTCGGGATGAGTGCTTGAACGA
TCACTGGTTTACCGCCCTAGCTAAGGCAAGGATTCGGATACTCTAG

Upstream 100 bases:

>100_bases
GAACGGCCGTGAAGAAGCGATTTACGGATGAGCAAATTATTGGCTTTCTGAAGCAGGCAGATGGAGGCAGTGGGCTTAGA
AGAATGGCGTCCAGCTCAAA

Downstream 100 bases:

>100_bases
CCACATGCTTCCATATTTTCCTAGAACTTGCCTGAGACAAGCTATATGCGTGTCACCGTACGGAACGAGTTGAGCATAAG
CCTATTATTTCAATCCAGCA

Product: ISRSO14-transposase orfB protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 41; Mature: 41

Protein sequence:

>41_residues
MVEAGKPTQNAYIESFNGRFRDECLNDHWFTALAKARIRIL

Sequences:

>Translated_41_residues
MVEAGKPTQNAYIESFNGRFRDECLNDHWFTALAKARIRIL
>Mature_41_residues
MVEAGKPTQNAYIESFNGRFRDECLNDHWFTALAKARIRIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 4784; Mature: 4784

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEAGKPTQNAYIESFNGRFRDECLNDHWFTALAKARIRIL
CCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MVEAGKPTQNAYIESFNGRFRDECLNDHWFTALAKARIRIL
CCCCCCCCCCHHHHCCCCCCHHHHCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]