Click here to switch to the map view.

The map label for this gene is degQ [H]

Identifier: 82701644

GI number: 82701644

Start: 576365

End: 577774

Strand: Direct

Name: degQ [H]

Synonym: Nmul_A0510

Alternate gene names: 82701644

Gene position: 576365-577774 (Clockwise)

Preceding gene: 82701643

Following gene: 82701645

Centisome position: 18.1

GC content: 59.36

Gene sequence:

>1410_bases
ATGAGAAAACCGTCCGGATCAGTTTCGCAGCCAGCTCCACTGTCAGTTTCACCGCTGTCAGTTTCACTCTGGCTGGTTTT
TATCGGCTTGCTGGTCATTGCGCTGCCGGGCTATCCGGCTTTGCCTTTCAGTGACACCAAAAATGGTGTGCCGACCCTGG
CGCCGGTGCTTCAGGACGTGACCCCGGCGGTCGTCAATATTTCCGTAGTGACGCGCTCGGCCATAGAAGAGAATCCCTTG
TTTCGGGACCCTTTCTTCCGCCGCTTTTTCAATCTTCCGGAGCAGGAGGCCCGGCCGGAGCGCAGTGTGGGTTCCGGCGT
GATCATGGATGCGGCCAAGGGTTATGTGGTGACCAACTACCACGTGATCAAGGATGCGCAGCAGGTGGTTGTGACACTCA
AAGACAGGCGCCAATTCCAGGCGAAGCTGGTGGGGACGGACCCGGGTACCGATATTGCCCTGCTGAAAATCGATGCCAAG
AACCTTAAGGCGCTGCGCCTCGGTGATTCCGATCTGCTCAACGTCGGGGATTTTGTCATCGCGATCGGGAATCCGTTCGG
TCTGGGGCAAACGGTAACATCCGGCATCGTCAGCGCATTGGGAAGAAGCGGACTGGATATCGAAGGCTATGAAGACTTCA
TCCAGACCGACGCCTCCATCAATCCGGGCAACTCCGGCGGAGCCCTCATCAACCTCAAGGGGGAACTGATCGGCATCAAC
ACCGCCATCATTGGTCCCGCAGGCGGCAACGTCGGCATTGGTTTTGCGGTTCCCAGTGTGATGGTGAAGGCAGTCCTCGA
TCAAATCCTGCGCTTCGGCGAGGTACGCCGCGGCAGACTGGGAGCGAGCAGCGAAGATATTACGCACGACCTGGCGGCCT
CACTGGGGTTGCCTTCCACGGAAGGCGCCATCATCAGTGCGGTCGAGCCGGGATCGCCTGCGGAAAAAGCCGGGGTGAAA
CCGCGTGATGTGATAACGACTGTCAACGGAAAACCTGTGCGGAACTCGATTGATTTGCGCAACAAGGTTGGACTGATGCC
CATCGGGGAGACGCTGGATCTCGGGCTGATCAGGAATGGGAAGCGGCTGACTGCGAAAGTAAAGATAGCCAAGCTGGCGG
AGGCTTCCAGTGCAGGTGCGGAGGCCGTGCCGGAGGTCTCAGGCGCAACCGTGGCGGACTTGAAACCCGGCGCCCGCCGG
GGAATTGAGGGCGTGATGGTAACAGACGTGGAAGTCAATAGTCCCGCCTGGCTGCGGGGCATCCGGCCGGGGGACCTCAT
CATTGGCGTCAATCGCCGCCAGGTCCGTTCGGTGCAGGAGTTGCTTGCTGCTCTCAAGGCCAGCAGCCAGGGACGGCTCA
CCCTAAGCCTGATACGGGGCGACTTCAGGGTGACTATCAGGATCAGGTAA

Upstream 100 bases:

>100_bases
TCGAGCCGGGCGTGGAAGAACTTCTGAGCCTGAACAAAGACTGAAAGAATCACATCACCCTCGGCCAACTGGTGGATAAA
TCAAGTAAAGCACGCCTCAA

Downstream 100 bases:

>100_bases
ATCCGTTTCCCGAATATCCTGAAGCCGAATCGCTTCCGATAGTCTCTTTAGCCGCTCACAGCACTTCAAAATACATGATC
TCTCGCTTTCCTTCCGGCCT

Product: peptidase S1C, Do

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 469; Mature: 469

Protein sequence:

>469_residues
MRKPSGSVSQPAPLSVSPLSVSLWLVFIGLLVIALPGYPALPFSDTKNGVPTLAPVLQDVTPAVVNISVVTRSAIEENPL
FRDPFFRRFFNLPEQEARPERSVGSGVIMDAAKGYVVTNYHVIKDAQQVVVTLKDRRQFQAKLVGTDPGTDIALLKIDAK
NLKALRLGDSDLLNVGDFVIAIGNPFGLGQTVTSGIVSALGRSGLDIEGYEDFIQTDASINPGNSGGALINLKGELIGIN
TAIIGPAGGNVGIGFAVPSVMVKAVLDQILRFGEVRRGRLGASSEDITHDLAASLGLPSTEGAIISAVEPGSPAEKAGVK
PRDVITTVNGKPVRNSIDLRNKVGLMPIGETLDLGLIRNGKRLTAKVKIAKLAEASSAGAEAVPEVSGATVADLKPGARR
GIEGVMVTDVEVNSPAWLRGIRPGDLIIGVNRRQVRSVQELLAALKASSQGRLTLSLIRGDFRVTIRIR

Sequences:

>Translated_469_residues
MRKPSGSVSQPAPLSVSPLSVSLWLVFIGLLVIALPGYPALPFSDTKNGVPTLAPVLQDVTPAVVNISVVTRSAIEENPL
FRDPFFRRFFNLPEQEARPERSVGSGVIMDAAKGYVVTNYHVIKDAQQVVVTLKDRRQFQAKLVGTDPGTDIALLKIDAK
NLKALRLGDSDLLNVGDFVIAIGNPFGLGQTVTSGIVSALGRSGLDIEGYEDFIQTDASINPGNSGGALINLKGELIGIN
TAIIGPAGGNVGIGFAVPSVMVKAVLDQILRFGEVRRGRLGASSEDITHDLAASLGLPSTEGAIISAVEPGSPAEKAGVK
PRDVITTVNGKPVRNSIDLRNKVGLMPIGETLDLGLIRNGKRLTAKVKIAKLAEASSAGAEAVPEVSGATVADLKPGARR
GIEGVMVTDVEVNSPAWLRGIRPGDLIIGVNRRQVRSVQELLAALKASSQGRLTLSLIRGDFRVTIRIR
>Mature_469_residues
MRKPSGSVSQPAPLSVSPLSVSLWLVFIGLLVIALPGYPALPFSDTKNGVPTLAPVLQDVTPAVVNISVVTRSAIEENPL
FRDPFFRRFFNLPEQEARPERSVGSGVIMDAAKGYVVTNYHVIKDAQQVVVTLKDRRQFQAKLVGTDPGTDIALLKIDAK
NLKALRLGDSDLLNVGDFVIAIGNPFGLGQTVTSGIVSALGRSGLDIEGYEDFIQTDASINPGNSGGALINLKGELIGIN
TAIIGPAGGNVGIGFAVPSVMVKAVLDQILRFGEVRRGRLGASSEDITHDLAASLGLPSTEGAIISAVEPGSPAEKAGVK
PRDVITTVNGKPVRNSIDLRNKVGLMPIGETLDLGLIRNGKRLTAKVKIAKLAEASSAGAEAVPEVSGATVADLKPGARR
GIEGVMVTDVEVNSPAWLRGIRPGDLIIGVNRRQVRSVQELLAALKASSQGRLTLSLIRGDFRVTIRIR

Specific function: Protease with a shared specificity with degP [H]

COG id: COG0265

COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PDZ (DHR) domains [H]

Homologues:

Organism=Homo sapiens, GI22129776, Length=309, Percent_Identity=36.2459546925566, Blast_Score=151, Evalue=1e-36,
Organism=Homo sapiens, GI4506141, Length=305, Percent_Identity=37.7049180327869, Blast_Score=150, Evalue=2e-36,
Organism=Homo sapiens, GI7019477, Length=311, Percent_Identity=36.0128617363344, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI24308541, Length=251, Percent_Identity=33.8645418326693, Blast_Score=130, Evalue=2e-30,
Organism=Escherichia coli, GI1789629, Length=466, Percent_Identity=45.9227467811159, Blast_Score=364, Evalue=1e-102,
Organism=Escherichia coli, GI1786356, Length=449, Percent_Identity=44.3207126948775, Blast_Score=360, Evalue=1e-100,
Organism=Escherichia coli, GI1789630, Length=362, Percent_Identity=37.0165745856354, Blast_Score=216, Evalue=2e-57,
Organism=Drosophila melanogaster, GI24646839, Length=288, Percent_Identity=34.0277777777778, Blast_Score=141, Evalue=8e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR009003
- InterPro:   IPR011782
- InterPro:   IPR001254
- InterPro:   IPR001940 [H]

Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]

EC number: 3.4.21.-

Molecular weight: Translated: 49404; Mature: 49404

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPSGSVSQPAPLSVSPLSVSLWLVFIGLLVIALPGYPALPFSDTKNGVPTLAPVLQDV
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
TPAVVNISVVTRSAIEENPLFRDPFFRRFFNLPEQEARPERSVGSGVIMDAAKGYVVTNY
CHHHEEEEEEEHHHHHCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCEEEEEE
HVIKDAQQVVVTLKDRRQFQAKLVGTDPGTDIALLKIDAKNLKALRLGDSDLLNVGDFVI
EEHHCCHHHEEEHHHCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEE
AIGNPFGLGQTVTSGIVSALGRSGLDIEGYEDFIQTDASINPGNSGGALINLKGELIGIN
EECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCEEEEEE
TAIIGPAGGNVGIGFAVPSVMVKAVLDQILRFGEVRRGRLGASSEDITHDLAASLGLPST
EEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
EGAIISAVEPGSPAEKAGVKPRDVITTVNGKPVRNSIDLRNKVGLMPIGETLDLGLIRNG
CCCEEEEECCCCCHHHCCCCCHHEEEECCCCCCCCCCCHHHCCCCEECCCCCCEEEEECC
KRLTAKVKIAKLAEASSAGAEAVPEVSGATVADLKPGARRGIEGVMVTDVEVNSPAWLRG
CEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEECCCCCHHHCCCEEEEEEEEECCCHHEEC
IRPGDLIIGVNRRQVRSVQELLAALKASSQGRLTLSLIRGDFRVTIRIR
CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEC
>Mature Secondary Structure
MRKPSGSVSQPAPLSVSPLSVSLWLVFIGLLVIALPGYPALPFSDTKNGVPTLAPVLQDV
CCCCCCCCCCCCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHC
TPAVVNISVVTRSAIEENPLFRDPFFRRFFNLPEQEARPERSVGSGVIMDAAKGYVVTNY
CHHHEEEEEEEHHHHHCCCCCCCHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCEEEEEE
HVIKDAQQVVVTLKDRRQFQAKLVGTDPGTDIALLKIDAKNLKALRLGDSDLLNVGDFVI
EEHHCCHHHEEEHHHCCCEEEEEECCCCCCCEEEEEECCCCCEEEEECCCCCCCCCCEEE
AIGNPFGLGQTVTSGIVSALGRSGLDIEGYEDFIQTDASINPGNSGGALINLKGELIGIN
EECCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCCCCCCCEEEEECCEEEEEE
TAIIGPAGGNVGIGFAVPSVMVKAVLDQILRFGEVRRGRLGASSEDITHDLAASLGLPST
EEEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCC
EGAIISAVEPGSPAEKAGVKPRDVITTVNGKPVRNSIDLRNKVGLMPIGETLDLGLIRNG
CCCEEEEECCCCCHHHCCCCCHHEEEECCCCCCCCCCCHHHCCCCEECCCCCCEEEEECC
KRLTAKVKIAKLAEASSAGAEAVPEVSGATVADLKPGARRGIEGVMVTDVEVNSPAWLRG
CEEEEEEEEEHHHHCCCCCCCCCCCCCCCEEECCCCCHHHCCCEEEEEEEEECCCHHEEC
IRPGDLIIGVNRRQVRSVQELLAALKASSQGRLTLSLIRGDFRVTIRIR
CCCCCEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8576051; 9278503 [H]