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The map label for this gene is ygdL [H]

Identifier: 82701508

GI number: 82701508

Start: 407378

End: 409432

Strand: Reverse

Name: ygdL [H]

Synonym: Nmul_A0374

Alternate gene names: 82701508

Gene position: 409432-407378 (Counterclockwise)

Preceding gene: 82701509

Following gene: 82701507

Centisome position: 12.86

GC content: 52.94

Gene sequence:

>2055_bases
ATGGTTCAGGATTTCTCATATCGTGAGGCCACCTCCCGCAATATTGGGTGGGTAACACCTGTCGAACAGGAAATTCTACG
GTACAAACGCATTGCAATTGCCGGTCTGGGCGGCGTAGGGGGTATTCATCTGCTGACCTTGGCTCGGCTGGGGATTGGCG
CATTTCATATTGCGGATTTTGATGTTTTTGATCTGGTCAATTTCAACCGCCAGGTAGGCGCCACGGTCTCGAGCCTCAAT
CGGCCAAAGAGCGAGGTTTTAGCCGCAATGGCACGAGATATCAATCCGGAACTGAATATCAAAATCTTTCCTCGGGGCGT
CAATCCGGATAATTTGCCGGAATTTTTCGAGGACGTTGATCTGTATATCGATGGTCTCGACTTTTTCGCCTTTTCAGCTC
GCGCAGTAACGTTTTCGGCCTGTGAGGAGCGAGGTATTCCCGCCATCACGGCCGCTCCTTTAGGCATGGGATCGGCATTA
TTGAATTTCCTGCCTGGCAAAATGACCTTCGAAGAGTATTTTCAGTGGGGTGATCTACCCGAGGTGGAAAAGGCCCTCCG
TTTCTTGATAGGACTCGCGCCCACTGGTCTCCATGCCCGTTACCTGCTGGATCCCTCCAGCATCAATCTCAAGGAACGCC
GCGGTCCCTCAACGATAATGGGTTGCCAACTCTGCGCGGGTATTGCAGCTACTGAAGCTCTGAAGATCCTGCTGAATCGC
GGTACGGTTTTGGCCGCTCCACATGGAGTTCATTTCGACGCCTACCGCAATAAACTGATCCGTACCTGGCGTCCGGGCGG
GAACAGCAATCCTCTCCAGCAGTTCAGTCTCGCAATTGCAAGGCGTCGCCTGAGCAAAAAAAATACTAACAAGCTCTTCG
GAGATCCGGAGCCCTATTCTTCCACGGGTACTATCATTCCCTCTGAATCGACAGGCTGTGAGGACGAAAGTAAAAGGCCA
CCCGAGCTCAAGTCATATACATTAATCGAGCAAATCCTCGATCTTGCCAGGTGGGCGCCGAGCGGAGACAATACCCAGCC
TTGGCGGTTCCAGATCGTCGGGGACAATTCCCTGACAATACACGGTTTCGACACCCGTGATCACTGCGTCTATGACCTGG
ATGGACGTCCTAGTCAAATTTCAATCGGCGCATTGCTGGAAACCATATCTATTGCCGCTACGGGCCATGGCCTAAAAACA
AGTATCCAGCGGCGTCCCGATTGTTCCGATACGAAGCCAACCTTCGATATCCATTTCGGGAGTGACCCGCATCTTAAGCC
CGATCCGCTTATTCCTTATATACGCTATCGCAGCGTTCAACGCCGCCCCATGAGTACGCGGCCTTTAACCGGGAGAGAAA
AGAGTGCGCTAGAGGCTGCAGTGAAACCCCAGTACGACATCTTGTGGCTGGAGGGTTTTTCCAGGCGTCTGGAAATGGCC
CGGTTCCTGTTCGACAATGCAAAATTGCGTCTGATTATGCCTGAAGCCTATCAGGTGCACCGCGCCATCATACAATGGAA
CTCCCGCTATAGCGCAGATAAAGTACCTGACCAGGCACTCGGAGTTGATCCATTTACAGCCCGGTTAATGCATTGGATCA
TGGGAAGCTGGGATCGTGTCGAATTTTTTAACACTTTTTTGGCGGGAACCTGGGCACCGCGTCTCCAGATGGATTTGATC
CCCGCCATGGCCTGTGGCGGGCATTTCGTTATCCTGGCGCCTCACGCGCCTCGATCCATCGATGACTACGTGAGCGCAGG
ACGCGTTATGCAGCGCTTCTGGCTTACAGCAACTAAACTTGGCCTGCAGCTGCAGCCGGAAATAACTCCTCTGGTTTTTG
CACGTTATAGTCGTGAAAGTATTCCCTTTTCGAAGACAAAACAATGCATTACACTCGCCACCTCACTGACCCGACGGCTT
GGTCATATTCTGGGAGAAGAAGTCGCGACCAGAGCCGTTTTCATGGGGCGCATCGGGGCTGGCAAAAGACCCGCTTCGCG
GTCTATCCGGCTCGAGCTGGAGCAGATGCTTTGGCGCCTGAGGGCAGGAGCTTAA

Upstream 100 bases:

>100_bases
TCAGTCTTCCCTGCCAAAGCATTTGGCATTGATGCTATCATTCACATCATATATAGCTCACCTCAAATTGCTCCCCTATT
CCTACTGATCGGCCCGGGTA

Downstream 100 bases:

>100_bases
TATGCCCGTTCGCCCGCTTCATTCATTGGCAAGTCTGGGGGAATACTTGTCTCCTTCCGAAGTCTGGAACAATGAGGAAT
CTGGTGGCTATTTGCTGACT

Product: UBA/THIF-type NAD/FAD binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 684; Mature: 684

Protein sequence:

>684_residues
MVQDFSYREATSRNIGWVTPVEQEILRYKRIAIAGLGGVGGIHLLTLARLGIGAFHIADFDVFDLVNFNRQVGATVSSLN
RPKSEVLAAMARDINPELNIKIFPRGVNPDNLPEFFEDVDLYIDGLDFFAFSARAVTFSACEERGIPAITAAPLGMGSAL
LNFLPGKMTFEEYFQWGDLPEVEKALRFLIGLAPTGLHARYLLDPSSINLKERRGPSTIMGCQLCAGIAATEALKILLNR
GTVLAAPHGVHFDAYRNKLIRTWRPGGNSNPLQQFSLAIARRRLSKKNTNKLFGDPEPYSSTGTIIPSESTGCEDESKRP
PELKSYTLIEQILDLARWAPSGDNTQPWRFQIVGDNSLTIHGFDTRDHCVYDLDGRPSQISIGALLETISIAATGHGLKT
SIQRRPDCSDTKPTFDIHFGSDPHLKPDPLIPYIRYRSVQRRPMSTRPLTGREKSALEAAVKPQYDILWLEGFSRRLEMA
RFLFDNAKLRLIMPEAYQVHRAIIQWNSRYSADKVPDQALGVDPFTARLMHWIMGSWDRVEFFNTFLAGTWAPRLQMDLI
PAMACGGHFVILAPHAPRSIDDYVSAGRVMQRFWLTATKLGLQLQPEITPLVFARYSRESIPFSKTKQCITLATSLTRRL
GHILGEEVATRAVFMGRIGAGKRPASRSIRLELEQMLWRLRAGA

Sequences:

>Translated_684_residues
MVQDFSYREATSRNIGWVTPVEQEILRYKRIAIAGLGGVGGIHLLTLARLGIGAFHIADFDVFDLVNFNRQVGATVSSLN
RPKSEVLAAMARDINPELNIKIFPRGVNPDNLPEFFEDVDLYIDGLDFFAFSARAVTFSACEERGIPAITAAPLGMGSAL
LNFLPGKMTFEEYFQWGDLPEVEKALRFLIGLAPTGLHARYLLDPSSINLKERRGPSTIMGCQLCAGIAATEALKILLNR
GTVLAAPHGVHFDAYRNKLIRTWRPGGNSNPLQQFSLAIARRRLSKKNTNKLFGDPEPYSSTGTIIPSESTGCEDESKRP
PELKSYTLIEQILDLARWAPSGDNTQPWRFQIVGDNSLTIHGFDTRDHCVYDLDGRPSQISIGALLETISIAATGHGLKT
SIQRRPDCSDTKPTFDIHFGSDPHLKPDPLIPYIRYRSVQRRPMSTRPLTGREKSALEAAVKPQYDILWLEGFSRRLEMA
RFLFDNAKLRLIMPEAYQVHRAIIQWNSRYSADKVPDQALGVDPFTARLMHWIMGSWDRVEFFNTFLAGTWAPRLQMDLI
PAMACGGHFVILAPHAPRSIDDYVSAGRVMQRFWLTATKLGLQLQPEITPLVFARYSRESIPFSKTKQCITLATSLTRRL
GHILGEEVATRAVFMGRIGAGKRPASRSIRLELEQMLWRLRAGA
>Mature_684_residues
MVQDFSYREATSRNIGWVTPVEQEILRYKRIAIAGLGGVGGIHLLTLARLGIGAFHIADFDVFDLVNFNRQVGATVSSLN
RPKSEVLAAMARDINPELNIKIFPRGVNPDNLPEFFEDVDLYIDGLDFFAFSARAVTFSACEERGIPAITAAPLGMGSAL
LNFLPGKMTFEEYFQWGDLPEVEKALRFLIGLAPTGLHARYLLDPSSINLKERRGPSTIMGCQLCAGIAATEALKILLNR
GTVLAAPHGVHFDAYRNKLIRTWRPGGNSNPLQQFSLAIARRRLSKKNTNKLFGDPEPYSSTGTIIPSESTGCEDESKRP
PELKSYTLIEQILDLARWAPSGDNTQPWRFQIVGDNSLTIHGFDTRDHCVYDLDGRPSQISIGALLETISIAATGHGLKT
SIQRRPDCSDTKPTFDIHFGSDPHLKPDPLIPYIRYRSVQRRPMSTRPLTGREKSALEAAVKPQYDILWLEGFSRRLEMA
RFLFDNAKLRLIMPEAYQVHRAIIQWNSRYSADKVPDQALGVDPFTARLMHWIMGSWDRVEFFNTFLAGTWAPRLQMDLI
PAMACGGHFVILAPHAPRSIDDYVSAGRVMQRFWLTATKLGLQLQPEITPLVFARYSRESIPFSKTKQCITLATSLTRRL
GHILGEEVATRAVFMGRIGAGKRPASRSIRLELEQMLWRLRAGA

Specific function: Unknown

COG id: COG0476

COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the hesA/moeB/thiF family [H]

Homologues:

Organism=Escherichia coli, GI1789177, Length=126, Percent_Identity=33.3333333333333, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI87082356, Length=165, Percent_Identity=29.6969696969697, Blast_Score=71, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009036
- InterPro:   IPR016040
- InterPro:   IPR000594 [H]

Pfam domain/function: PF00899 ThiF [H]

EC number: NA

Molecular weight: Translated: 76549; Mature: 76549

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS01332 UPF0074

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVQDFSYREATSRNIGWVTPVEQEILRYKRIAIAGLGGVGGIHLLTLARLGIGAFHIADF
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCEEEECCC
DVFDLVNFNRQVGATVSSLNRPKSEVLAAMARDINPELNIKIFPRGVNPDNLPEFFEDVD
CHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHH
LYIDGLDFFAFSARAVTFSACEERGIPAITAAPLGMGSALLNFLPGKMTFEEYFQWGDLP
HEECCHHHHHHHHHHEEHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHCCCCCH
EVEKALRFLIGLAPTGLHARYLLDPSSINLKERRGPSTIMGCQLCAGIAATEALKILLNR
HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GTVLAAPHGVHFDAYRNKLIRTWRPGGNSNPLQQFSLAIARRRLSKKNTNKLFGDPEPYS
CCEEECCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
STGTIIPSESTGCEDESKRPPELKSYTLIEQILDLARWAPSGDNTQPWRFQIVGDNSLTI
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEE
HGFDTRDHCVYDLDGRPSQISIGALLETISIAATGHGLKTSIQRRPDCSDTKPTFDIHFG
EECCCCCCEEEECCCCCCEEEHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECC
SDPHLKPDPLIPYIRYRSVQRRPMSTRPLTGREKSALEAAVKPQYDILWLEGFSRRLEMA
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHH
RFLFDNAKLRLIMPEAYQVHRAIIQWNSRYSADKVPDQALGVDPFTARLMHWIMGSWDRV
HHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHH
EFFNTFLAGTWAPRLQMDLIPAMACGGHFVILAPHAPRSIDDYVSAGRVMQRFWLTATKL
HHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
GLQLQPEITPLVFARYSRESIPFSKTKQCITLATSLTRRLGHILGEEVATRAVFMGRIGA
CCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GKRPASRSIRLELEQMLWRLRAGA
CCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MVQDFSYREATSRNIGWVTPVEQEILRYKRIAIAGLGGVGGIHLLTLARLGIGAFHIADF
CCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHEECCCCCCHHHHHHHHHHCCCEEEECCC
DVFDLVNFNRQVGATVSSLNRPKSEVLAAMARDINPELNIKIFPRGVNPDNLPEFFEDVD
CHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHHHHH
LYIDGLDFFAFSARAVTFSACEERGIPAITAAPLGMGSALLNFLPGKMTFEEYFQWGDLP
HEECCHHHHHHHHHHEEHHHHHHCCCCEEEECCCCHHHHHHHHCCCCCCHHHHHCCCCCH
EVEKALRFLIGLAPTGLHARYLLDPSSINLKERRGPSTIMGCQLCAGIAATEALKILLNR
HHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCC
GTVLAAPHGVHFDAYRNKLIRTWRPGGNSNPLQQFSLAIARRRLSKKNTNKLFGDPEPYS
CCEEECCCCCCHHHHHHHHHEEECCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
STGTIIPSESTGCEDESKRPPELKSYTLIEQILDLARWAPSGDNTQPWRFQIVGDNSLTI
CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEE
HGFDTRDHCVYDLDGRPSQISIGALLETISIAATGHGLKTSIQRRPDCSDTKPTFDIHFG
EECCCCCCEEEECCCCCCEEEHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCEEEEECC
SDPHLKPDPLIPYIRYRSVQRRPMSTRPLTGREKSALEAAVKPQYDILWLEGFSRRLEMA
CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCEEEEEHHHHHHHHHHH
RFLFDNAKLRLIMPEAYQVHRAIIQWNSRYSADKVPDQALGVDPFTARLMHWIMGSWDRV
HHHHCCCCEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHCCCCHHHHHHHHHHHCCCHHH
EFFNTFLAGTWAPRLQMDLIPAMACGGHFVILAPHAPRSIDDYVSAGRVMQRFWLTATKL
HHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHC
GLQLQPEITPLVFARYSRESIPFSKTKQCITLATSLTRRLGHILGEEVATRAVFMGRIGA
CCEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
GKRPASRSIRLELEQMLWRLRAGA
CCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]