| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is macB [H]
Identifier: 82701504
GI number: 82701504
Start: 402055
End: 403284
Strand: Reverse
Name: macB [H]
Synonym: Nmul_A0370
Alternate gene names: 82701504
Gene position: 403284-402055 (Counterclockwise)
Preceding gene: 82701507
Following gene: 82701503
Centisome position: 12.66
GC content: 52.68
Gene sequence:
>1230_bases GTGGATCGTATTCGGCTCGACTTTTTGCTTGCATTTCGAAATATGGTGCGGCACAAGCGTCGCAGCGCCATCGCTGTGGG CGCGGTTACGTTTGGCATTATCGCCCTGATCCTTGCAGCGGGCTTTATCGAGTGGATATTCTGGGGCATGCAGGAAGCCA CCATCCAGTCGCAACTCGGCCATATCCAGATCAGCAGACCGGGCTATCAGGAAGCAGGAAAAGCTGATCCATACGCTTAT CTTTTACCGGATGCAATTCCTGAACTGGAACCGGCAAACGGTCCAGCTCAAATCAAGACCATCATCCCCCGCCTCTCCTT TGGCGGTCTGATCAGTCACGGAGACGCAACTCTTTCATTTGTTGGAGAAGGAGTCATCCCAGAGGAAAAGGCCATTCTCA GCGGCTCGGTGGAAATTTCTGCGGGTGAAAATCTTTCAGTAGATGCCCCGAAGGGCATTATTCTAGGTGTGGGTCTTGGC CGCAACCTCAACGTAAACATTGGCGATAAGGTTGTGCTATTGGCGAGTACCGCATCAAGGGGCGTCAATGCGGTTGAGGT CACTGTCCGGGGATTGTTCTCCACTGTAAACAAGTCTTACGACGATATCGCCCTACGCATGCCGATCGAAACAGCCCGCC AACTCCTCCGGGTCAAAGGTTCTCACGTATGGGTAGTGTTGTTGAATGACACAGCGAAGACCGATACTGTACTCCAAAGA TTACGCGATTCATTGCAAAAGAGCGATTTCGAGGTGGTTCCCTGGTATGTCCTGGCTGATTTCTACAATAAGACCGTGGC TTTGTTTACAAAACAAATCCATGGCCTCAAGCTGATAATCGCCTTCATCATCCTTCTTGCCATTTTGAATGCCATGACGA TGTCGGTAATGGAGCGGATCGGGGAAATTGGTACTGATATGGCGCTTGGCGCCAGACGCATCGACGTTCTCCGACGCTTC CTAAGCGAAGGCATTCTGCTCGGCGGTTTCGGCGGCCTGCTCGGGGTTACGATAGGGGTAGCGCTGGCTGCCATGATATC GAGCATAGGGATCCCGATGCCGCCCCCCCCAGGGACGACCCGTGGCTATACGGGCGAAATACTTGTCACGTGGAATATTG CATTCGAATCCCTTTTGCTTGCGATCGGCGCAACGCTCACTGCCAGTATATACCCAGCCTGGAAGGCATCCCGCATGCAG ATAGTGGATGCGCTACGTCACAATAGATAA
Upstream 100 bases:
>100_bases AGGCGCAAGCAGAGAACTCGTTTCCCTGTTAACTCGTTCCCCTGTTCTCCCGGGCGATAGCGCGATGTGGCAGCGCGCAC TGAGCAGAAGGATATAGAGG
Downstream 100 bases:
>100_bases TTCGGAAAAGTGAATAATGCTCAGACTGGCCTTTCGAAATATTTTTCGACAGAAATCACACACCGCAATGACTCTGGCGG CGATCGTGAGCGGCGTGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MDRIRLDFLLAFRNMVRHKRRSAIAVGAVTFGIIALILAAGFIEWIFWGMQEATIQSQLGHIQISRPGYQEAGKADPYAY LLPDAIPELEPANGPAQIKTIIPRLSFGGLISHGDATLSFVGEGVIPEEKAILSGSVEISAGENLSVDAPKGIILGVGLG RNLNVNIGDKVVLLASTASRGVNAVEVTVRGLFSTVNKSYDDIALRMPIETARQLLRVKGSHVWVVLLNDTAKTDTVLQR LRDSLQKSDFEVVPWYVLADFYNKTVALFTKQIHGLKLIIAFIILLAILNAMTMSVMERIGEIGTDMALGARRIDVLRRF LSEGILLGGFGGLLGVTIGVALAAMISSIGIPMPPPPGTTRGYTGEILVTWNIAFESLLLAIGATLTASIYPAWKASRMQ IVDALRHNR
Sequences:
>Translated_409_residues MDRIRLDFLLAFRNMVRHKRRSAIAVGAVTFGIIALILAAGFIEWIFWGMQEATIQSQLGHIQISRPGYQEAGKADPYAY LLPDAIPELEPANGPAQIKTIIPRLSFGGLISHGDATLSFVGEGVIPEEKAILSGSVEISAGENLSVDAPKGIILGVGLG RNLNVNIGDKVVLLASTASRGVNAVEVTVRGLFSTVNKSYDDIALRMPIETARQLLRVKGSHVWVVLLNDTAKTDTVLQR LRDSLQKSDFEVVPWYVLADFYNKTVALFTKQIHGLKLIIAFIILLAILNAMTMSVMERIGEIGTDMALGARRIDVLRRF LSEGILLGGFGGLLGVTIGVALAAMISSIGIPMPPPPGTTRGYTGEILVTWNIAFESLLLAIGATLTASIYPAWKASRMQ IVDALRHNR >Mature_409_residues MDRIRLDFLLAFRNMVRHKRRSAIAVGAVTFGIIALILAAGFIEWIFWGMQEATIQSQLGHIQISRPGYQEAGKADPYAY LLPDAIPELEPANGPAQIKTIIPRLSFGGLISHGDATLSFVGEGVIPEEKAILSGSVEISAGENLSVDAPKGIILGVGLG RNLNVNIGDKVVLLASTASRGVNAVEVTVRGLFSTVNKSYDDIALRMPIETARQLLRVKGSHVWVVLLNDTAKTDTVLQR LRDSLQKSDFEVVPWYVLADFYNKTVALFTKQIHGLKLIIAFIILLAILNAMTMSVMERIGEIGTDMALGARRIDVLRRF LSEGILLGGFGGLLGVTIGVALAAMISSIGIPMPPPPGTTRGYTGEILVTWNIAFESLLLAIGATLTASIYPAWKASRMQ IVDALRHNR
Specific function: Part of the ABC transporter complex MacAB involved in macrolide export. Transmembrane domains (TMD) form a pore in the membrane and the ATP-binding domain (NBD) is responsible for energy generation [H]
COG id: COG4591
COG function: function code M; ABC-type transport system, involved in lipoprotein release, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Escherichia coli, GI1787105, Length=186, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR017911 - InterPro: IPR003593 - InterPro: IPR003838 [H]
Pfam domain/function: PF00005 ABC_tran; PF02687 FtsX [H]
EC number: NA
Molecular weight: Translated: 44263; Mature: 44263
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRIRLDFLLAFRNMVRHKRRSAIAVGAVTFGIIALILAAGFIEWIFWGMQEATIQSQLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HIQISRPGYQEAGKADPYAYLLPDAIPELEPANGPAQIKTIIPRLSFGGLISHGDATLSF EEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCEEEE VGEGVIPEEKAILSGSVEISAGENLSVDAPKGIILGVGLGRNLNVNIGDKVVLLASTASR CCCCCCCCCHHHEECCEEEECCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEECCCC GVNAVEVTVRGLFSTVNKSYDDIALRMPIETARQLLRVKGSHVWVVLLNDTAKTDTVLQR CCCEEHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH LRDSLQKSDFEVVPWYVLADFYNKTVALFTKQIHGLKLIIAFIILLAILNAMTMSVMERI HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEIGTDMALGARRIDVLRRFLSEGILLGGFGGLLGVTIGVALAAMISSIGIPMPPPPGTT HHHCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RGYTGEILVTWNIAFESLLLAIGATLTASIYPAWKASRMQIVDALRHNR CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MDRIRLDFLLAFRNMVRHKRRSAIAVGAVTFGIIALILAAGFIEWIFWGMQEATIQSQLG CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HIQISRPGYQEAGKADPYAYLLPDAIPELEPANGPAQIKTIIPRLSFGGLISHGDATLSF EEEECCCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECCCCEEEE VGEGVIPEEKAILSGSVEISAGENLSVDAPKGIILGVGLGRNLNVNIGDKVVLLASTASR CCCCCCCCCHHHEECCEEEECCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEEEECCCC GVNAVEVTVRGLFSTVNKSYDDIALRMPIETARQLLRVKGSHVWVVLLNDTAKTDTVLQR CCCEEHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHH LRDSLQKSDFEVVPWYVLADFYNKTVALFTKQIHGLKLIIAFIILLAILNAMTMSVMERI HHHHHHHCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GEIGTDMALGARRIDVLRRFLSEGILLGGFGGLLGVTIGVALAAMISSIGIPMPPPPGTT HHHCCCHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC RGYTGEILVTWNIAFESLLLAIGATLTASIYPAWKASRMQIVDALRHNR CCCCCEEEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA