| Definition | Nitrosospira multiformis ATCC 25196 chromosome, complete genome. |
|---|---|
| Accession | NC_007614 |
| Length | 3,184,243 |
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The map label for this gene is purH [H]
Identifier: 82701268
GI number: 82701268
Start: 137927
End: 139489
Strand: Direct
Name: purH [H]
Synonym: Nmul_A0133
Alternate gene names: 82701268
Gene position: 137927-139489 (Clockwise)
Preceding gene: 82701267
Following gene: 82701269
Centisome position: 4.33
GC content: 58.99
Gene sequence:
>1563_bases ATGTCGATTAAACAGGCCCTGATCAGTGTTTCAGATAAAAGCGGTATTGTCGAGTTTGCTCAAGCGCTGCACAAACTTGG AGTAACCATTCTGTCAACGGGCGGCACCGCCAGACTTTTGAGGGATGCCGGCGTTGCCGTGACCGAGGTCGGGAGCTACA CCGGCTTTCCCGAGATGCTGGATGGGCGGGTCAAGACCCTGCATCCAAAAATACACGCGGGAATTCTGGCCAGACGGGAT TTGTCCGAGCATGTGTCCGCGCTGGAAAAGGCGGAAATTCCTGCCATCGATCTGGTAGTAGTGAATCTCTATCCTTTCAG CCAGACAGTGGCGCAGCCGGATTGCAGTCTGGAAGAGGCCATTGAAAATATCGATATCGGCGGCCCGACCATGGTGCGCG CTGCGGCCAAGAACTACCAGAGCGTGGCCGTAGTCACCGATCCGGCGGATTACCCCGCGTTACTTGACGAGATGAAGACT GCCGGCGGCGAGGTTACGCCTGAGTTCCGGTTCCGGCTGGCGTGCAAGGCGTTTTCGCATACAGCCGCCTATGATGGGGC GATCAGCAACTACCTCACCTCCATCGAGGGGGAAAATGCACAACGTCGTACCTTTCCGGAACGCCTGAATCTCAATTTCA GCCTGGTGCAGCCTCTGCGCTACGGGGAAAACCCGCATCAGCAGGCCGCCTTTTACCGCGATCCGCAACTCGTTCCCGGC AGCCTTGCAAGCTACAGGCAGTTGCAGGGCAAGGAGCTCTCTTACAACAACATCGCGGACGCGGATGCCGCCTGGGAATG CGTAAAGACGTTTGATTCCCCGGCCTGTGTCATCATCAAGCATGCCAATCCTTGCGGCGTGGCAATCAGCGATTCGCCGC TCGCGGCTTACAAGCTTGCATTTGCCACCGATCCCACTTCCGCATTCGGCGGCATTATCGCTTTCAATCGCACGCTGGAC GCCTCGGCCGCCGAGGCGGTGATGAGCCAGTTTGTCGAAGTGATCATCGCGCCGCAAATGACCGACGAGGCAAGGCAGAT GCTCGCGCGCAAAGCCAATGTGCGCGTGCTGACCGTGCCGCTCCAGGCGGGGAACAACGCCCACGACTTCAAGCGAGTGG GTGGAGGATTGCTGGTGCAGACTCCGGACAATCTCAACGTTACCCCTAACCAATTGAAGGTGGTGACCGAAGTCCAGCCA ACAGCGCAGCAATTGCAGGACCTGCTGTTTGCCTGGCGGGTGGCGAAATTCGTCAAATCGAATGCCATCGTCTTTTGTGC CAACGGCCGCACGCTTGGCGTGGGCGCCGGACAGATGAGCAGGGTGGATAGCGCGCGCATTGCCTCCATCAAAGCCGGGA ACGCGAACCTCACCCTGGCAGGCTCGGTAGTGGCATCCGATGCCTTCTTCCCTTTCCGCGACGGACTGGATGTCGTCGTC CAGGCGGGGGCGGTGGCGGTCATCCAGCCGGGGGGCAGTGTGCGGGATGAAGAGGTTATCGCTGCGGCGGATGAACAAGG GGTGGCAATGGTATTTACCGGCGTGCGCCATTTCAGGCATTGA
Upstream 100 bases:
>100_bases CAAAATTGTCGTTACGCGCCTGAAGGTCAGCCGCAAGCGGGCCAATTAACGGTTGTAATGCATCACGCTACAGACCCATC CTGATTCAATAAAAATACGA
Downstream 100 bases:
>100_bases ATTCAAGCATTGAATGCATGGAAAAAGCGGTTGTTCAATGCCGGCCGAGCCACCTCTCCCATACCCGAACCCCGCATAGC CCTCCTTTTGGGTCGATAGT
Product: bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
Products: NA
Alternate protein names: Phosphoribosylaminoimidazolecarboxamide formyltransferase; AICAR transformylase; IMP cyclohydrolase; ATIC; IMP synthase; Inosinicase [H]
Number of amino acids: Translated: 520; Mature: 519
Protein sequence:
>520_residues MSIKQALISVSDKSGIVEFAQALHKLGVTILSTGGTARLLRDAGVAVTEVGSYTGFPEMLDGRVKTLHPKIHAGILARRD LSEHVSALEKAEIPAIDLVVVNLYPFSQTVAQPDCSLEEAIENIDIGGPTMVRAAAKNYQSVAVVTDPADYPALLDEMKT AGGEVTPEFRFRLACKAFSHTAAYDGAISNYLTSIEGENAQRRTFPERLNLNFSLVQPLRYGENPHQQAAFYRDPQLVPG SLASYRQLQGKELSYNNIADADAAWECVKTFDSPACVIIKHANPCGVAISDSPLAAYKLAFATDPTSAFGGIIAFNRTLD ASAAEAVMSQFVEVIIAPQMTDEARQMLARKANVRVLTVPLQAGNNAHDFKRVGGGLLVQTPDNLNVTPNQLKVVTEVQP TAQQLQDLLFAWRVAKFVKSNAIVFCANGRTLGVGAGQMSRVDSARIASIKAGNANLTLAGSVVASDAFFPFRDGLDVVV QAGAVAVIQPGGSVRDEEVIAAADEQGVAMVFTGVRHFRH
Sequences:
>Translated_520_residues MSIKQALISVSDKSGIVEFAQALHKLGVTILSTGGTARLLRDAGVAVTEVGSYTGFPEMLDGRVKTLHPKIHAGILARRD LSEHVSALEKAEIPAIDLVVVNLYPFSQTVAQPDCSLEEAIENIDIGGPTMVRAAAKNYQSVAVVTDPADYPALLDEMKT AGGEVTPEFRFRLACKAFSHTAAYDGAISNYLTSIEGENAQRRTFPERLNLNFSLVQPLRYGENPHQQAAFYRDPQLVPG SLASYRQLQGKELSYNNIADADAAWECVKTFDSPACVIIKHANPCGVAISDSPLAAYKLAFATDPTSAFGGIIAFNRTLD ASAAEAVMSQFVEVIIAPQMTDEARQMLARKANVRVLTVPLQAGNNAHDFKRVGGGLLVQTPDNLNVTPNQLKVVTEVQP TAQQLQDLLFAWRVAKFVKSNAIVFCANGRTLGVGAGQMSRVDSARIASIKAGNANLTLAGSVVASDAFFPFRDGLDVVV QAGAVAVIQPGGSVRDEEVIAAADEQGVAMVFTGVRHFRH >Mature_519_residues SIKQALISVSDKSGIVEFAQALHKLGVTILSTGGTARLLRDAGVAVTEVGSYTGFPEMLDGRVKTLHPKIHAGILARRDL SEHVSALEKAEIPAIDLVVVNLYPFSQTVAQPDCSLEEAIENIDIGGPTMVRAAAKNYQSVAVVTDPADYPALLDEMKTA GGEVTPEFRFRLACKAFSHTAAYDGAISNYLTSIEGENAQRRTFPERLNLNFSLVQPLRYGENPHQQAAFYRDPQLVPGS LASYRQLQGKELSYNNIADADAAWECVKTFDSPACVIIKHANPCGVAISDSPLAAYKLAFATDPTSAFGGIIAFNRTLDA SAAEAVMSQFVEVIIAPQMTDEARQMLARKANVRVLTVPLQAGNNAHDFKRVGGGLLVQTPDNLNVTPNQLKVVTEVQPT AQQLQDLLFAWRVAKFVKSNAIVFCANGRTLGVGAGQMSRVDSARIASIKAGNANLTLAGSVVASDAFFPFRDGLDVVVQ AGAVAVIQPGGSVRDEEVIAAADEQGVAMVFTGVRHFRH
Specific function: De novo purine biosynthesis; ninth step. De novo purine biosynthesis; tenth step. [C]
COG id: COG0138
COG function: function code F; AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the purH family [H]
Homologues:
Organism=Homo sapiens, GI20127454, Length=478, Percent_Identity=38.2845188284519, Blast_Score=275, Evalue=6e-74, Organism=Escherichia coli, GI1790439, Length=527, Percent_Identity=61.4800759013283, Blast_Score=630, Evalue=0.0, Organism=Caenorhabditis elegans, GI71985564, Length=518, Percent_Identity=35.7142857142857, Blast_Score=273, Evalue=2e-73, Organism=Caenorhabditis elegans, GI71985574, Length=348, Percent_Identity=26.7241379310345, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI71985556, Length=119, Percent_Identity=34.453781512605, Blast_Score=72, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6323768, Length=480, Percent_Identity=36.4583333333333, Blast_Score=267, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6323056, Length=484, Percent_Identity=36.5702479338843, Blast_Score=266, Evalue=5e-72, Organism=Drosophila melanogaster, GI24649832, Length=488, Percent_Identity=37.2950819672131, Blast_Score=263, Evalue=3e-70,
Paralogues:
None
Copy number: 160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 640 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002695 - InterPro: IPR013982 - InterPro: IPR016193 - InterPro: IPR011607 [H]
Pfam domain/function: PF01808 AICARFT_IMPCHas; PF02142 MGS [H]
EC number: =2.1.2.3; =3.5.4.10 [H]
Molecular weight: Translated: 55636; Mature: 55505
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIKQALISVSDKSGIVEFAQALHKLGVTILSTGGTARLLRDAGVAVTEVGSYTGFPEML CCHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEECCCCCCCHHHH DGRVKTLHPKIHAGILARRDLSEHVSALEKAEIPAIDLVVVNLYPFSQTVAQPDCSLEEA CCCHHEECCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEEECCHHHHCCCCCCHHHH IENIDIGGPTMVRAAAKNYQSVAVVTDPADYPALLDEMKTAGGEVTPEFRFRLACKAFSH HHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHEEHHHHHHH TAAYDGAISNYLTSIEGENAQRRTFPERLNLNFSLVQPLRYGENPHQQAAFYRDPQLVPG HHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCCCEEECHHHCCCCHHHHHHHCCCCCCCCC SLASYRQLQGKELSYNNIADADAAWECVKTFDSPACVIIKHANPCGVAISDSPLAAYKLA CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCEEEEEE FATDPTSAFGGIIAFNRTLDASAAEAVMSQFVEVIIAPQMTDEARQMLARKANVRVLTVP EECCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEE LQAGNNAHDFKRVGGGLLVQTPDNLNVTPNQLKVVTEVQPTAQQLQDLLFAWRVAKFVKS ECCCCCHHHHHHHCCCEEEECCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHC NAIVFCANGRTLGVGAGQMSRVDSARIASIKAGNANLTLAGSVVASDAFFPFRDGLDVVV CCEEEEECCCEEEECCCHHHHCCCHHEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHEE QAGAVAVIQPGGSVRDEEVIAAADEQGVAMVFTGVRHFRH ECCEEEEECCCCCCCCCCEEEECCCCCEEEEEHHHHHHCC >Mature Secondary Structure SIKQALISVSDKSGIVEFAQALHKLGVTILSTGGTARLLRDAGVAVTEVGSYTGFPEML CHHHHHHHCCCCCCHHHHHHHHHHCCEEEEECCCHHHHHHHCCCEEEECCCCCCCHHHH DGRVKTLHPKIHAGILARRDLSEHVSALEKAEIPAIDLVVVNLYPFSQTVAQPDCSLEEA CCCHHEECCHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEEEEEECCHHHHCCCCCCHHHH IENIDIGGPTMVRAAAKNYQSVAVVTDPADYPALLDEMKTAGGEVTPEFRFRLACKAFSH HHHCCCCCHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHCCCCCCHHHHHEEHHHHHHH TAAYDGAISNYLTSIEGENAQRRTFPERLNLNFSLVQPLRYGENPHQQAAFYRDPQLVPG HHHHHHHHHHHHHHCCCCCCHHHCCHHHHCCCCEEECHHHCCCCHHHHHHHCCCCCCCCC SLASYRQLQGKELSYNNIADADAAWECVKTFDSPACVIIKHANPCGVAISDSPLAAYKLA CHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCEEECCCCCEEEEEE FATDPTSAFGGIIAFNRTLDASAAEAVMSQFVEVIIAPQMTDEARQMLARKANVRVLTVP EECCCCHHHCCEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEEE LQAGNNAHDFKRVGGGLLVQTPDNLNVTPNQLKVVTEVQPTAQQLQDLLFAWRVAKFVKS ECCCCCHHHHHHHCCCEEEECCCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHC NAIVFCANGRTLGVGAGQMSRVDSARIASIKAGNANLTLAGSVVASDAFFPFRDGLDVVV CCEEEEECCCEEEECCCHHHHCCCHHEEEEECCCCCEEEEEEEEECCCCCCCCCCHHHEE QAGAVAVIQPGGSVRDEEVIAAADEQGVAMVFTGVRHFRH ECCEEEEECCCCCCCCCCEEEECCCCCEEEEEHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA