Definition Nitrosospira multiformis ATCC 25196 chromosome, complete genome.
Accession NC_007614
Length 3,184,243

Click here to switch to the map view.

The map label for this gene is 82701249

Identifier: 82701249

GI number: 82701249

Start: 120420

End: 121574

Strand: Reverse

Name: 82701249

Synonym: Nmul_A0114

Alternate gene names: NA

Gene position: 121574-120420 (Counterclockwise)

Preceding gene: 82701250

Following gene: 82701247

Centisome position: 3.82

GC content: 41.56

Gene sequence:

>1155_bases
ATGTTAAACATTTTTAACTTTGCTGACTGTAGATCCGCAATTATTCGCTGTAATCTTGTACTTATTGTATTTGGGCTTAC
GAACGTCGCAGTGGCGCACGACTTGCCGGGGTTAAAATCGGAAAACTTATCGAATATATCGGACTCCACCGGACTAAGAA
ATTCGACACCTGCACCCGATCAAATTAGCAGCGATAAAGACGAAAATTCGCAACTGCGCAACTCCGAACGCGCGACGTTA
ATCGCCATGAAAGATCAGAGTCATGCTATTGTCATTGCTTCTGCTCTAGCTAGAGAGGCCGGATCTCAAAATATATATGG
TCTAACTGAAGCCGACAAAAAGAAAGTCGAAGCTGTAATTCTGCGTGCTAAAACTTGGGACCCAGGCACAATAGTAAAGA
TTTGCTTTTATGAGGAAGGGAAAACTGCGAGGCCAGCTATTGTAGAATTTGCTAAAACTTGGACGAATCACGGTAACGTT
AAATTTGATTTCGGAGTTGCCCCCGCTTACAGAACCTGTTCTCCAAATGAAAGTAGTAATATTCGAATTACATTCCGTAC
GAAAGGTTATTGGTCTTTGATCGGGACGGACTCTATGTATAGAGTATCTGCTCCTAGTATGGGTCTTCAGGATTTTGATT
CTCGTGATCCCAAGGATCCAGAATTTGCTACTACTGTATTACACGAATTTGGGCATGCGCTAGGCTTTCATCATGAACAT
CAAACACCAGCTGCAGACTGTGAAGCTCAAATGGATACGGGAAAGATAAAACAAATATACAGATGGGACGATAGTGAGAT
AAAAGAAAACTTCCATAGAATTGAAGTTTCATCGCTAACTGGTATGAAGAATGGGTTTAAAGTGGGAGATTCCCCTGATG
GCAAAGTGGCCTATACCGTATATGATCCAAACTCAATCATGCATTACGCATTGCCATACATAATTTTCAAGCAACCCTTG
CCTAAAACTGGTTCTTGCTATATCCCACCAAACCGGACGTTATCGAAGATTGATATTGCTGGGATGAAGGAAGCGTATCC
TAATACCGATCAAGCGAGCCTTACTGAACAAAATAGAAAGATAATTAAGGAATTAATGGTTGATCAGAGGCTCACTACGA
TCCAGAGGGCAGCCTTTTCCGTTTTACAAAAATAA

Upstream 100 bases:

>100_bases
AGAAACCTGTTTTAAATAGGATCAACTTAAAAATCCCAGAATCACCATTTGTCTAGCGGATCACGAAGACGAGTACGCCT
TTTCTGCTTAGGAGCGAACG

Downstream 100 bases:

>100_bases
CCTAACGCTTCGCGGTAATGGGGTTTGAAGTCTTGGGCTGTTGCCGGTTTTGAAGACGCACAGCTAAGCTAATTGAGTTC
TTTCAAAGTCTACAGGGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MLNIFNFADCRSAIIRCNLVLIVFGLTNVAVAHDLPGLKSENLSNISDSTGLRNSTPAPDQISSDKDENSQLRNSERATL
IAMKDQSHAIVIASALAREAGSQNIYGLTEADKKKVEAVILRAKTWDPGTIVKICFYEEGKTARPAIVEFAKTWTNHGNV
KFDFGVAPAYRTCSPNESSNIRITFRTKGYWSLIGTDSMYRVSAPSMGLQDFDSRDPKDPEFATTVLHEFGHALGFHHEH
QTPAADCEAQMDTGKIKQIYRWDDSEIKENFHRIEVSSLTGMKNGFKVGDSPDGKVAYTVYDPNSIMHYALPYIIFKQPL
PKTGSCYIPPNRTLSKIDIAGMKEAYPNTDQASLTEQNRKIIKELMVDQRLTTIQRAAFSVLQK

Sequences:

>Translated_384_residues
MLNIFNFADCRSAIIRCNLVLIVFGLTNVAVAHDLPGLKSENLSNISDSTGLRNSTPAPDQISSDKDENSQLRNSERATL
IAMKDQSHAIVIASALAREAGSQNIYGLTEADKKKVEAVILRAKTWDPGTIVKICFYEEGKTARPAIVEFAKTWTNHGNV
KFDFGVAPAYRTCSPNESSNIRITFRTKGYWSLIGTDSMYRVSAPSMGLQDFDSRDPKDPEFATTVLHEFGHALGFHHEH
QTPAADCEAQMDTGKIKQIYRWDDSEIKENFHRIEVSSLTGMKNGFKVGDSPDGKVAYTVYDPNSIMHYALPYIIFKQPL
PKTGSCYIPPNRTLSKIDIAGMKEAYPNTDQASLTEQNRKIIKELMVDQRLTTIQRAAFSVLQK
>Mature_384_residues
MLNIFNFADCRSAIIRCNLVLIVFGLTNVAVAHDLPGLKSENLSNISDSTGLRNSTPAPDQISSDKDENSQLRNSERATL
IAMKDQSHAIVIASALAREAGSQNIYGLTEADKKKVEAVILRAKTWDPGTIVKICFYEEGKTARPAIVEFAKTWTNHGNV
KFDFGVAPAYRTCSPNESSNIRITFRTKGYWSLIGTDSMYRVSAPSMGLQDFDSRDPKDPEFATTVLHEFGHALGFHHEH
QTPAADCEAQMDTGKIKQIYRWDDSEIKENFHRIEVSSLTGMKNGFKVGDSPDGKVAYTVYDPNSIMHYALPYIIFKQPL
PKTGSCYIPPNRTLSKIDIAGMKEAYPNTDQASLTEQNRKIIKELMVDQRLTTIQRAAFSVLQK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42820; Mature: 42820

Theoretical pI: Translated: 7.58; Mature: 7.58

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIFNFADCRSAIIRCNLVLIVFGLTNVAVAHDLPGLKSENLSNISDSTGLRNSTPAPD
CCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QISSDKDENSQLRNSERATLIAMKDQSHAIVIASALAREAGSQNIYGLTEADKKKVEAVI
CCCCCCCCHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHCCCCCEEECCHHHHHHEEEEE
LRAKTWDPGTIVKICFYEEGKTARPAIVEFAKTWTNHGNVKFDFGVAPAYRTCSPNESSN
EEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
IRITFRTKGYWSLIGTDSMYRVSAPSMGLQDFDSRDPKDPEFATTVLHEFGHALGFHHEH
EEEEEEECCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
QTPAADCEAQMDTGKIKQIYRWDDSEIKENFHRIEVSSLTGMKNGFKVGDSPDGKVAYTV
CCCCCCCCCCCCCCHHHHEEECCHHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCCEEEEE
YDPNSIMHYALPYIIFKQPLPKTGSCYIPPNRTLSKIDIAGMKEAYPNTDQASLTEQNRK
ECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEECCCCHHHCCCCCCHHHHHHHHH
IIKELMVDQRLTTIQRAAFSVLQK
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLNIFNFADCRSAIIRCNLVLIVFGLTNVAVAHDLPGLKSENLSNISDSTGLRNSTPAPD
CCCCCCHHHHHHHHHHHHHEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
QISSDKDENSQLRNSERATLIAMKDQSHAIVIASALAREAGSQNIYGLTEADKKKVEAVI
CCCCCCCCHHHHCCCCCEEEEEEECCCCEEEEHHHHHHHCCCCCEEECCHHHHHHEEEEE
LRAKTWDPGTIVKICFYEEGKTARPAIVEFAKTWTNHGNVKFDFGVAPAYRTCSPNESSN
EEECCCCCCCEEEEEEECCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCC
IRITFRTKGYWSLIGTDSMYRVSAPSMGLQDFDSRDPKDPEFATTVLHEFGHALGFHHEH
EEEEEEECCEEEEECCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
QTPAADCEAQMDTGKIKQIYRWDDSEIKENFHRIEVSSLTGMKNGFKVGDSPDGKVAYTV
CCCCCCCCCCCCCCHHHHEEECCHHHHHHHHHEEEEHHHCCCCCCCCCCCCCCCCEEEEE
YDPNSIMHYALPYIIFKQPLPKTGSCYIPPNRTLSKIDIAGMKEAYPNTDQASLTEQNRK
ECCCCHHHHHHHHHHCCCCCCCCCCEEECCCCCCCCEECCCCHHHCCCCCCHHHHHHHHH
IIKELMVDQRLTTIQRAAFSVLQK
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA