Definition Shigella boydii Sb227, complete genome.
Accession NC_007613
Length 4,519,823

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The map label for this gene is yjjI [H]

Identifier: 82546729

GI number: 82546729

Start: 4492791

End: 4494101

Strand: Reverse

Name: yjjI [H]

Synonym: SBO_4441

Alternate gene names: 82546729

Gene position: 4494101-4492791 (Counterclockwise)

Preceding gene: 82546735

Following gene: 82546728

Centisome position: 99.43

GC content: 53.24

Gene sequence:

>1311_bases
GTGCCACTTCACGAATGGCTGGAGCTGGAAGGCGCGAAAGATCTTGATGACGCACTCTCTCTGCTGACCATTCTTTACCA
CCACGTACCGTCGGTCACATCGATGCCGGTCTACCTAGGGCAACTGGATGCGTTGTTGCAACCGCATGTTAGAATTCTAA
CACAAGACGAGATCGATGTTCGAATAAAACGTTTCTGGCGTTACCTCGACGGAACCCTGCCAGACGCCTTTATGCACGCC
AATATCGGCCCGTCTGATTCGCCCATTACCCGCGCGATCTTACGTGCAGACGCAGAGTTGAAGCAGGTTTCACCGAACCT
GACCTTTATCTACGATCCTGAAATCCCCCCTGATGACCTGCTGCTGGAAGTGGCGAAGAACATCTGTGAATGTAGCAAAC
CGCACATCGCCAACGGTCCGGTGCATGATAAAATTTTCACAAAAGGGGGCTACGGGATTGTGAGCTGTTACAACTCACTG
CCGCTGGCGGGTGGTGGCAGCACGCTGGTACGCCTTAACCTGAAAGCCATTGCCGAGCGCAGCGAATCGCTGGATGACTT
CTTTACGCGCACTCTACCGCACTACTGCCAGCAGCAGATCGCCATCATCGATGCGCGGTGTGAATTCCTCTATCAACAAT
CACACTTCTTTGAGAATAGCTTCCTGGTGAAAGAAGGGCTGATTAACCCTGAACGTTTTGTGCCAATGTTTGGCATGTAT
GGGCTGGCGGAAGCGGTTAACTTGCTGTGTGAGAAAGAAGGGATTGCCGCGCGCTACGGTAAAGAAGCCGCCGCAAATGA
AGTGGGTTATCGCATCAGCGCGCAACTGGCGGAGTTTGTCGCCAATACCCCCGTGAAATATGGCTGGCAAAAACGCGCCA
TGTTACACGCACAGTCGGGGATCAGTTCCGATATCGGCACCACGCCGGGCGCGCGTTTGCCGTATGGCGATGAGCCAGAT
CCGATCATCCATCTGCAAACTGTCGCCCCGCATCATGCTTATTATTATTCCGGCATCAGCGACATTCTGACGCTCGACGA
AACCATCAAACGTAATCCGCAGGCGCTGGTACAGCTTTGCCTCGGTGCCTTTAAAGCCGGAATGCGTGAATTTACCGCCA
ATGTCAGCGGTAACGATCTGGTTCGCGTTACCGGTTATATGGTGCGTTTGTCGGATTTAGAAAAATATCGCGCCGAAGGT
TCACGCACCAACACCACCTGGCTGGGCGAAGAAGCCACACGCAACACTCGTATTCTGGAACGCCAGCCGCGCGTGATAAG
CCATGAACAGCAGATGCGCTTTAGTCAGTAA

Upstream 100 bases:

>100_bases
TTCGCGTTTAAACTCTGCGCTAAAATTTCTTTTTTTCATTGGAGCACCTGTGTTGTTCTGAGGTGAGCATATCACCTCTG
TTCAGGTGGCCAAATTCAGT

Downstream 100 bases:

>100_bases
GATTATCCCCTTCTCCTGCGTTGACGGGCCAGGCAGTCGTCTGGCTCTGTTTCTGCAGGGCTGCAATCTGCGCTGCAAAA
ACTGTCACAATCCGTGGACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MPLHEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPHVRILTQDEIDVRIKRFWRYLDGTLPDAFMHA
NIGPSDSPITRAILRADAELKQVSPNLTFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL
PLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMY
GLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPD
PIIHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG
SRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ

Sequences:

>Translated_436_residues
MPLHEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPHVRILTQDEIDVRIKRFWRYLDGTLPDAFMHA
NIGPSDSPITRAILRADAELKQVSPNLTFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSL
PLAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMY
GLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPD
PIIHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEG
SRTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ
>Mature_435_residues
PLHEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPHVRILTQDEIDVRIKRFWRYLDGTLPDAFMHAN
IGPSDSPITRAILRADAELKQVSPNLTFIYDPEIPPDDLLLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLP
LAGGGSTLVRLNLKAIAERSESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMYG
LAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSGISSDIGTTPGARLPYGDEPDP
IIHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLCLGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGS
RTNTTWLGEEATRNTRILERQPRVISHEQQMRFSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0521 [H]

Homologues:

Organism=Escherichia coli, GI1790840, Length=432, Percent_Identity=98.8425925925926, Blast_Score=887, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016905 [H]

Pfam domain/function: PF11230 DUF3029 [H]

EC number: NA

Molecular weight: Translated: 48893; Mature: 48762

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLHEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPHVRILTQDEIDV
CCHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHEEEECCHHHH
RIKRFWRYLDGTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEIPPDDL
HHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHH
LLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAER
HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEHHCCCCCCCCCCEEEEEEHHHHHHH
SESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH
GLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSG
HHHHHHHHHHHCCCCHHHHCCHHHHHHHCHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCC
ISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLC
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHHHCCHHHHHHHH
LGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEATRNTRILE
HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEECCCHHHCCCHHHH
RQPRVISHEQQMRFSQ
CCCCHHCCHHHHCCCC
>Mature Secondary Structure 
PLHEWLELEGAKDLDDALSLLTILYHHVPSVTSMPVYLGQLDALLQPHVRILTQDEIDV
CHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHEEEECCHHHH
RIKRFWRYLDGTLPDAFMHANIGPSDSPITRAILRADAELKQVSPNLTFIYDPEIPPDDL
HHHHHHHHHCCCCCHHHHCCCCCCCCCHHHHHHHHHCCHHHHCCCCEEEEECCCCCHHHH
LLEVAKNICECSKPHIANGPVHDKIFTKGGYGIVSCYNSLPLAGGGSTLVRLNLKAIAER
HHHHHHHHHHCCCCCCCCCCCCCCEECCCCCEEEEHHCCCCCCCCCCEEEEEEHHHHHHH
SESLDDFFTRTLPHYCQQQIAIIDARCEFLYQQSHFFENSFLVKEGLINPERFVPMFGMY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHH
GLAEAVNLLCEKEGIAARYGKEAAANEVGYRISAQLAEFVANTPVKYGWQKRAMLHAQSG
HHHHHHHHHHHCCCCHHHHCCHHHHHHHCHHHHHHHHHHHHCCCHHCCHHHHHHHHHHCC
ISSDIGTTPGARLPYGDEPDPIIHLQTVAPHHAYYYSGISDILTLDETIKRNPQALVQLC
CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCHHHHHHCHHHHHHHHHHHHCCHHHHHHHH
LGAFKAGMREFTANVSGNDLVRVTGYMVRLSDLEKYRAEGSRTNTTWLGEEATRNTRILE
HHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHCCCCCCCEECCCHHHCCCHHHH
RQPRVISHEQQMRFSQ
CCCCHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 3019678 [H]