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The map label for this gene is yjiM [H]

Identifier: 82546682

GI number: 82546682

Start: 4438904

End: 4439812

Strand: Reverse

Name: yjiM [H]

Synonym: SBO_4387

Alternate gene names: 82546682

Gene position: 4439812-4438904 (Counterclockwise)

Preceding gene: 82546683

Following gene: 82546681

Centisome position: 98.23

GC content: 53.91

Gene sequence:

>909_bases
GTGGTACGGGGAAGGAAAATCATGTCACTTATCACCGATCTACCCGCCATTTTCGATCAGTTCTCTGAAGCTCGCCAGAA
AGGCTTTCTCACCGTCATGGATCTCAAGGAGCGCGGCATTCCGCTGGTTGGCACTTACTGCACCTTTATGCCGCAAGAGA
TCCCGATGGCAGCCGGTGCGGTTGTGGTTTCGCTCTGTTCTACCTCTGATGAAACCATTGAAGAAGCGGAGAAAGATCTG
CCGCGCAACCTCTGCCCGCTGATTAAAAGCAGCTACGGCTTCGGCAAAACCGATAAATGCCCCTACTTCTACTTTTCGGA
TCTGGTGGTCGGTGAAACCACCTGCGACGGCAAAAAGAAAATGTATGAATACATGGCGGAGTTTAAGCCCGTTCATGTGA
TGCAGTTGCCGAACAGCGTTAAGGACGATGCCTCGCGTGCGTTATGGAAAGCCGAGATGCTGCGCTTGCAAAAAACGGTA
GAAGAACGTTTTGGGCACGAGATTAGCGAAGATGCTCTGCGCGATGCCATTGCGCTGAAAAACCGCGAACGTCGCGCACT
GGCCAATTTTTATCATCTTGGGCAGTTAAATCCTCCGGCGCTTAGCGGCAGCGACATTCTGAAAGTGGTCTACGGCGCAA
CCTTCCGGTTCGATAAAGAGGCGTTGATCAATGAACTGGATGCAATGACCGCCCGCGTTCGTCAGCAGTGGGAAGAAGGC
CAGCGACTGGACCCGCGTCCACGCATTTTAATCACCGGCTGCCCGATTGGCGGCGCAGCAGAAAAAGTGGTGCGGGCGAT
TGAAGAGAATGGCGGCTGGGTTGTCGGTTATGAAAACTGCACTGGGGCGAAAGCGACCGAGCTAATGCGTGGCGGAAACG
GGCGATGTCTACGACGCGCTGGCGGATAA

Upstream 100 bases:

>100_bases
TTTTAGAAATCCATGAAAAACTAAGTGGCTAACCGCGAGAGAGATCAAATAAACCACACTAAAAGAATGGTAATAATGTG
GCCTCTTTTCATTATCTCCC

Downstream 100 bases:

>100_bases
ATATCTGGCGATTGGCTGCTCCTGTGTTTCGCCGAACGATCAGCGCCTGCAAATGCTCAGCCAGATGGTGGAAGAATATC
AGGTCGATGGCGTAGTTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MVRGRKIMSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDL
PRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTV
EERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEG
QRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATELMRGGNGRCLRRAGG

Sequences:

>Translated_302_residues
MVRGRKIMSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDL
PRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTV
EERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEG
QRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATELMRGGNGRCLRRAGG
>Mature_302_residues
MVRGRKIMSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGAVVVSLCSTSDETIEEAEKDL
PRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKKMYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTV
EERFGHEISEDALRDAIALKNRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEG
QRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATELMRGGNGRCLRRAGG

Specific function: Unknown

COG id: COG1775

COG function: function code E; Benzoyl-CoA reductase/2-hydroxyglutaryl-CoA dehydratase subunit, BcrC/BadD/HgdB

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0007 [H]

Homologues:

Organism=Escherichia coli, GI87082427, Length=280, Percent_Identity=99.2857142857143, Blast_Score=584, Evalue=1e-168,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010327 [H]

Pfam domain/function: PF06050 HGD-D [H]

EC number: NA

Molecular weight: Translated: 33744; Mature: 33744

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVRGRKIMSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCEEEHHHHHCCHHCCHHHHH
VVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKK
HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHH
MYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALK
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEG
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
QRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATELMRGGNGRCLRRA
CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEECCC
GG
CC
>Mature Secondary Structure
MVRGRKIMSLITDLPAIFDQFSEARQKGFLTVMDLKERGIPLVGTYCTFMPQEIPMAAGA
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHCCCCEEEHHHHHCCHHCCHHHHH
VVVSLCSTSDETIEEAEKDLPRNLCPLIKSSYGFGKTDKCPYFYFSDLVVGETTCDGKKK
HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCCCEEEECCEEECCCCCCHHHH
MYEYMAEFKPVHVMQLPNSVKDDASRALWKAEMLRLQKTVEERFGHEISEDALRDAIALK
HHHHHHHCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
NRERRALANFYHLGQLNPPALSGSDILKVVYGATFRFDKEALINELDAMTARVRQQWEEG
CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCC
QRLDPRPRILITGCPIGGAAEKVVRAIEENGGWVVGYENCTGAKATELMRGGNGRCLRRA
CCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCCCEECCC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]