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The map label for this gene is yjiC [H]

Identifier: 82546672

GI number: 82546672

Start: 4429436

End: 4430266

Strand: Reverse

Name: yjiC [H]

Synonym: SBO_4376

Alternate gene names: 82546672

Gene position: 4430266-4429436 (Counterclockwise)

Preceding gene: 82546674

Following gene: 82546668

Centisome position: 98.02

GC content: 39.23

Gene sequence:

>831_bases
ATGTCTATGCCATTAAGCAATGCCCTTCAGAGTCAAATTATTACAGATAATCACTTCCTTCATCATCCAAAAGTCGACAA
TAAGTTAACACGTGAATATGAATATACACGCATGGATACGGAAAATATCTATCTTCTGCCTCTTACTCGTGGAAATAACC
ATAATTACGATGGAAAAAGCGTTGTCGAAATTAGAAAACTTAATATTGGCAAACAGTCCTGGCCATTTAATTATGCGACA
GATACATGCAGAGAATTCAATGGTATTACAACAACAGGACGTATGCTCTATCGAAACTTGAAAATCACCTCAGCTTTAGA
CGAAATATATGGTGGCATATGTAAAAAGGCGCATGCTGCTACAGAGTTAGCAGAAGGTTTACGGCTAAATTTATTTATGA
AGAGCCCTTTCGATCCTGTTGAGGACTATACAGTTCATGAAATAACATTAGGCCCTGGTTACAATGTTCCTGGTTATGCC
GGAACCACGATAGGATATATTTCAACCCTTCCAGCTTCTCAGGCAAAAAGATGGACCAATGAGCAGCCAAGAATTGATAT
CTATATTGATCAGATAATAACTGTCTCAGGGGTGGCAAATTCTTCCGGATTCGCCCTTGCCGCATTACTTAATGCTAATA
TTGGAATGGGAAATGACCCAATAATTGGTATAGAAGCCTATCCTGGTACCGCGGAGATCCATGCAAAAATGGGATATAAC
GTTATCCCCGGTGATGAAGATGCGCCACTCAAACGCATGACTCTGCAACCGTCATCTCTTCCAGAACTGTTTGAATTAAA
AAATGGTGAATGGAATTATATTGGCAAATAA

Upstream 100 bases:

>100_bases
CAACAGAAACATGCATGTCATTTTTTTACTTCTTTTTTACTACAGAAAAATTTATCTATTTTTCTAAACATCGGTGAAAT
ACTCATAAAAGGTAACTATT

Downstream 100 bases:

>100_bases
CCACTGAGAAGAATGAGTACTAACATTCAGGTTATATAGATATTTAAACAATACCCTGCAATTTACAAAGTAATACTCAT
TGCGACTTCTTAATTTAAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MSMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIYLLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYAT
DTCREFNGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYA
GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK

Sequences:

>Translated_276_residues
MSMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIYLLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYAT
DTCREFNGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYA
GTTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
>Mature_275_residues
SMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIYLLPLTRGNNHNYDGKSVVEIRKLNIGKQSWPFNYATD
TCREFNGITTTGRMLYRNLKITSALDEIYGGICKKAHAATELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYAG
TTIGYISTLPASQAKRWTNEQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYNV
IPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yjfZ [H]

Homologues:

Organism=Escherichia coli, GI1790781, Length=276, Percent_Identity=89.8550724637681, Blast_Score=518, Evalue=1e-148,
Organism=Escherichia coli, GI1790648, Length=225, Percent_Identity=40, Blast_Score=173, Evalue=1e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021220 [H]

Pfam domain/function: PF10887 DUF2686 [H]

EC number: NA

Molecular weight: Translated: 30763; Mature: 30632

Theoretical pI: Translated: 6.16; Mature: 6.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIYLLPLTRGNNHNYDGKS
CCCCHHHHHHHHHCCCCCEEECCCCCCHHHHCEEEEEECCCCEEEEEEECCCCCCCCCCE
VVEIRKLNIGKQSWPFNYATDTCREFNGITTTGRMLYRNLKITSALDEIYGGICKKAHAA
EEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYAGTTIGYISTLPASQAKRWTN
HHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHEECCCHHHHHHCCC
EQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCE
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
ECCCCCCCCCEEEEECCCCCCHHHHCCCCCEEECCC
>Mature Secondary Structure 
SMPLSNALQSQIITDNHFLHHPKVDNKLTREYEYTRMDTENIYLLPLTRGNNHNYDGKS
CCCHHHHHHHHHCCCCCEEECCCCCCHHHHCEEEEEECCCCEEEEEEECCCCCCCCCCE
VVEIRKLNIGKQSWPFNYATDTCREFNGITTTGRMLYRNLKITSALDEIYGGICKKAHAA
EEEEEEECCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TELAEGLRLNLFMKSPFDPVEDYTVHEITLGPGYNVPGYAGTTIGYISTLPASQAKRWTN
HHHHCCCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHHEECCCHHHHHHCCC
EQPRIDIYIDQIITVSGVANSSGFALAALLNANIGMGNDPIIGIEAYPGTAEIHAKMGYN
CCCEEEEEEEEEEEEECCCCCCCEEEEEEEECCCCCCCCCEEEEEECCCCEEEEEECCCE
VIPGDEDAPLKRMTLQPSSLPELFELKNGEWNYIGK
ECCCCCCCCCEEEEECCCCCCHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]