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The map label for this gene is yjfM [H]

Identifier: 82546573

GI number: 82546573

Start: 4320476

End: 4321114

Strand: Reverse

Name: yjfM [H]

Synonym: SBO_4270

Alternate gene names: 82546573

Gene position: 4321114-4320476 (Counterclockwise)

Preceding gene: 82546574

Following gene: 82546572

Centisome position: 95.6

GC content: 49.3

Gene sequence:

>639_bases
ATGGCCAGAAAACGCAAATCAAGAAATAACAGTAAAATTGGTCACGGAGCGATCAGTCGCATTGGTAGACCGAATAATCC
TTTTGAACCGCGTCGCAATCGCTACGCACAAAAATACTTAACGTTGGCGCTAATGGGCGGTGCCGCTTTTTTTGTATTGA
AAGGTTGTGGCGATAGTGGCGATGTCGATAACGACGGCGACGGAACGTTTTATTCGACAGTGCAGGATTGTATTGATGAC
GGTAATAATGCCGACATTTGCGCGCGTGGCTGGAACAACGCCAAAGCGGCATTTTATGCCGATGTTCCGAAGAATATGAC
TCAGCAGAATTGTCAGTCTAAGTACGAAAATTGCTACTACGACAATGTTGAACAGAGTTGGATCCCGGTCGTTTCTGGAT
TTTTGTTAAGCCGGGTTATTCGTAAAGATCGCGATGAGCCGTTCGTCTATAACAGCGGCGGATCCTCATTTGCTTCCCGC
CCCGTCTGGCTCAACACTTCCGGTGATTACTCCTGGCGCTCCGGTTCTGGCAAAAAAGAGTCTTACTCTTCAGGCGGCTT
TACCACCAAAAAAGCGTCAACCGTTTCGCGCGGCGGCTATGGTCGTTCTTCCAGCGCCCGTGGGCATTGGGGAGGCTAA

Upstream 100 bases:

>100_bases
AATTATTAATCACAATACCGCAGCAGGAATGTTTATGGGAACCGCCGCGCTGGCTGGCGGTATTTTTAACGCAGCTTGTA
TGACATGGTAATGGACGATC

Downstream 100 bases:

>100_bases
TCATGCTGAGACACAACGTTCCTGTGCGACGGGATCTGGACCAGATCGCCGCTAACAACGGTTTCGACTTTCATATCATC
GACAATGAAATCTATTGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDD
GNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
PVWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG

Sequences:

>Translated_212_residues
MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDD
GNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASR
PVWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
>Mature_211_residues
ARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSGDVDNDGDGTFYSTVQDCIDDG
NNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYYDNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRP
VWLNTSGDYSWRSGSGKKESYSSGGFTTKKASTVSRGGYGRSSSARGHWGG

Specific function: Unknown

COG id: COG5463

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790628, Length=212, Percent_Identity=96.6981132075472, Blast_Score=422, Evalue=1e-119,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009576 [H]

Pfam domain/function: PF06693 DUF1190 [H]

EC number: NA

Molecular weight: Translated: 23315; Mature: 23184

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSG
CCCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
DVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYY
CCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
DNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWLNTSGDYSWRSGSGKKE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC
SYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
ARKRKSRNNSKIGHGAISRIGRPNNPFEPRRNRYAQKYLTLALMGGAAFFVLKGCGDSG
CCCCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEEEECCCCCC
DVDNDGDGTFYSTVQDCIDDGNNADICARGWNNAKAAFYADVPKNMTQQNCQSKYENCYY
CCCCCCCCHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEECCCHHHHHHHHHHHHHHCCC
DNVEQSWIPVVSGFLLSRVIRKDRDEPFVYNSGGSSFASRPVWLNTSGDYSWRSGSGKKE
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCC
SYSSGGFTTKKASTVSRGGYGRSSSARGHWGG
CCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]